NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGGTAGTTACACTGGAGGGTGTGTATGTGTGTGGGGTGCCCTC
TCATTGAAACAGGCAGAGGGGGGATTGTATATGAACTTACCAGCATGGGA
GAATGGGAGAACCTGGAAAGGGGATAATATTTGAAATGTATATAAAGAAA
ATATCCAATATAAATAAATAAATAAATAAATAAATAAAATAAATAAATAT
ATATATATATATTTGACGAGAATAAAAGAATTGTTTTAGCTTCCTTTATT
TTAAAGTTAACATGCATGTATGTTAAGCTACAATTTACCCAGACTTTGTA
AATTTCATCCTCTGTCCATTCTTAGGATTACACCAGTAATATTAATATTT
TTATTGATTTTCAAATAAATTTTTATGGAATTGTCAAAAAATAGGAGATA
AAGTTAATGTTTGATGAGAGTAAAGCACATTTATATATGACAATTGTGAA
CATTTGATCAGTATTTTCTGTACTTATAAGACAAAGTCTTTTGAATTAAT
TACTGTTAAAGTAGAAGTCTCTGCCAGGTTCCTGCTGTTATAAGTGGCTC
TCAGGAATGGGTATCCTCCCACTTTGGATCCTAAAACAGCTGTGATCAGG
AATGTAAAGATAATAGTAAACATTTTAATAATAAAATTACAATACTGATG
TTAAAAGGTGAATAAGTGATTGAAACTAAGAT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACAGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACTCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGGTGA
AAAATTCAGGTGACAGCAGATGCTGGAAAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGTGATTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGCCGGTTACTCAGAAAATTGGACATAGTACTACCAGAGGATCCAG
CAATACCTCTCCTGGGCAGATATCCAGAAGATGTCCCAACCGGTAAGAAG
GATACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGAATACAGAAAATGT
GGTACATTTACACAATGGAATACTACTCAACTATTAAAAAGTGAATTTAT
GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCTTGCTGAGTGAGG
TAACACATTCACAAAGGAATTCACACATTATGTACTCACTGATAAGTGGA
TATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTGCTAAA
CATATNGAACTCAAGAAGAATGAAGACTGAAGTGTGAACACTATGCCTCT
CCTTAGAANTGGG

Query= MSMg01no493_m21.b1 MSMg01no493_m21.b1 CHROMAT_FILE:
MSMg01no493_m21.b1 PHD_FILE: MSMg01no493_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:29 2005
         (677 letters)



>mm_chr17_92841266_92842342
          Length = 1077

 Score = 1133 bits (586), Expect = 0.0
 Identities = 642/680 (94%), Gaps = 32/680 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagggtagttacactggagggtgtgtatgtgtgtggggtgccctctcattgaaa 64
           ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gaattcaagggtagggagactggagggtgtgtatgtgtgtggggtgccctctcattgaaa 282

                                                                       
Query: 65  caggcagaggggggattgtatatgaacttaccagcatgggagaatgggagaacctggaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 caggcagaggggggattgtatatgaacttaccagcatgggagaatgggagaacctggaaa 342

                                                                       
Query: 125 ggggataatatttgaaatgtatataaagaaaatatccaatataaataaataaataaataa 184
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggagataatatttgaaatgtatataaagaaaatatccaatataaataaataaataaataa 402

                                                                       
Query: 185 ataaataaaataaataaatatatatatatatatttgacgagaataaaagaattgttttag 244
           |||||||||                     ||||||| ||||||||||||||||||||||
Sbjct: 403 ataaataaa---------------------tatttgaagagaataaaagaattgttttag 441

                                                                       
Query: 245 cttcctttattttaaagttaacatgcatgtatgttaagctacaatttacccagactttgt 304
           |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||
Sbjct: 442 cttcctttattttaaagttaacatg----tatgttaagctacaatttacccagactttgt 497

                                                                       
Query: 305 aaatttcatcctctgtccattcttaggattacaccagtaatattaatatttttattgatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaatttcatcctctgtccattcttaggattacaccagtaatattaatatttttattgatt 557

                                                                       
Query: 365 ttcaaataaatttttatggaattgtcaaaaaataggagataaagttaatgtttgatgaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttcaaataaatttttatggaattgtcaaaaaataggagataaagttaatgtttgatgaga 617

                                                                       
Query: 425 gtaaagcacatttatatatgacaattgtgaacatttgatcagtattttctgtacttataa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 618 gtaaagcacatttatatatgacaattgtgaacatttgatcagtattttctgtatttataa 677

                                                                       
Query: 485 gacaaagtcttttgaattaattactgttaaagtagaagtctctgccaggttcctgctgtt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gacaaagtcttttgaattaattactgttaaagtagaagtctctgccaggttcctgctgtt 737

                                                                       
Query: 545 ataagtggctctcaggaatgggtatcctccc-------actttggatcctaaaacagctg 597
           |||||||||||||||||||||||||||||||       ||||||||||||||||||||||
Sbjct: 738 ataagtggctctcaggaatgggtatcctccctgtacccactttggatcctaaaacagctg 797

                                                                       
Query: 598 tgatcaggaatgtaaagataatagtaaacattttaataataaaattacaatactgatgtt 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tgatcaggaatgtaaagataatagtaaacattttaataataaaattacaatactgatgtt 857

                               
Query: 658 aaaaggtgaataagtgattg 677
           ||||||||||||||||||||
Sbjct: 858 aaaaggtgaataagtgattg 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)