Query= MSMg01no497_j03.b1 MSMg01no497_j03.b1 CHROMAT_FILE:
MSMg01no497_j03.b1 PHD_FILE: MSMg01no497_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:18 2005
(372 letters)
>mm_chr17_49388593_49389363
Length = 771
Score = 650 bits (336), Expect = 0.0
Identities = 348/354 (98%), Gaps = 5/354 (1%)
Strand = Plus / Plus
Query: 23 cctaggtctgggagatggctcagcaggtcaagacctgagttgaaatccacagcacccatg 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cctaggtctgggagatggctcagcaggtcaagacctgagttgaaatccacagcacccatg 282
Query: 83 ctggcacgtgtgcctctgatcctagtgctggctgccacttagaagcaggttcagcaagag 142
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctggcacatgtgcctctgatcctagtgctggctgccacttagaagcaggttcagcaagag 342
Query: 143 accccatctcaaaagaataatgtctacaaaggcatgacctggtctccatggagactcaga 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 accccatctcaaaagaataatgtctacaaaggcatgacctggtctccatggagactcaga 402
Query: 203 gggccagcccggggatgtgatcactcctctctcagggcttcacaggctgggtactgacac 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gggccagcccggggatgtgatcactcctctctcagggcttcacaggctgggtactgacac 462
Query: 263 tgtgaagtgggtatattctttggggatttctgttgatgatgatggtagatgctgtctgtc 322
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgtgaagtgggta-attctttggggatttctgttgatgatgatggtagatgctgtctgtc 521
Query: 323 tgtctgtctgt----gtggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 372
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgtctgtctgtctgtgtggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_j03.g1 MSMg01no497_j03.g1 CHROMAT_FILE:
MSMg01no497_j03.g1 PHD_FILE: MSMg01no497_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:19 2005
(406 letters)
>mm_chr17_49618821_49619626
Length = 806
Score = 746 bits (386), Expect = 0.0
Identities = 401/406 (98%)
Strand = Plus / Minus
Query: 1 ctcctcctgatgcttcacattgatggtttgagtgcatgcgtgagcttgtgtgttggttgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctcctcctggtgcttcacattgatggtttgagtgcatgcgtgagcttgtgtgttggttgc 547
Query: 61 agagagagaaaagagggtaatgtggagactctgttagctcagatgtactatcctgccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agagagagaaaagagggtaatgtggagactctgttagctcagatgtactatcctgccttt 487
Query: 121 ctttgtcttcccacagaccggcccggtgtcctccccacctccccctggaggtccactcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctttgtcttcccacagaccggcccggtgtcctccccacctccccctggaggtccactcac 427
Query: 181 cttgtcttcctccaggacaaccaatgatctgcctccacccccaccacctctcccctttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttgtcttcctccaggacaaccaatgatctgcctccacccccaccacctctcccctttga 367
Query: 241 tagctgtttacccccacccgcaccacccctccctcccggagggcctcccatccccccagg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagctgcccacccccacccgcaccacccctccctcccggagggcctcccatccccccagg 307
Query: 301 tgccccaccctgcttcagctcaggcccacccccatctcatgaccccttctccagcaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgccccaccctgcttcagctcaggcccacccccatctcatgaccccttctccagcaatga 247
Query: 361 agccccactcaggaaaaagcgcattccccagccttcacatccactg 406
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 agccccactcaggaaaaagcgcattccccagccttcacacccactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
