Query= MSMg01no502_a06.b1 MSMg01no502_a06.b1 CHROMAT_FILE:
MSMg01no502_a06.b1 PHD_FILE: MSMg01no502_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:57 2005
(637 letters)
>mm_chr17_10941898_10942935
Length = 1038
Score = 1197 bits (619), Expect = 0.0
Identities = 631/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttccctccatctttc-aattagctaccaatctctgtactttcagagactccc 62
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 838 ggaattctttccctccatctttcaaattagctaccaatctctgtactttcagagactccc 779
Query: 63 ctaagcccttttttatgaagtcagaaattttgaaatagatgacttttcttttatgtgact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctaagcccttttttatgaagtcagaaattttgaaatagatgacttttcttttatgtgact 719
Query: 123 ttagtcaggattcttggaggttagttctgtcaccttggtatacagtgtatatcacaccta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttagtcaggattcttggaggttagttctgtcaccttggtatacagtgtatatcacaccta 659
Query: 183 ataaatgggatcacactgacttactggacagtagggctgtatacttcatgccagccattg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ataaatgggatcacactgacttactggacagtagggctgtatacttcatgccagccattg 599
Query: 243 tcctcaatgacaggccttcagaaacccatgtatgagacctgtgcatgcacatctatcaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tcctcaatgacaggccttcagaaacccatgtatgagacctgtgcatgcacatctatcaca 539
Query: 303 tctttcacaatggtgaaaaaagagtgctaaggaaatatacccataactttgggggaatcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tctttcacaatggtgaaaaaagagtgctaaggaaatatacccataactttgggggaatcc 479
Query: 363 aggggcttgtaaactgagaagttagcagttgagttgatgccacatgagaccttaaggttt 422
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aggggcttgtaaaatgagaagttagcagttgagttgatgccacatgagaccttaaggttt 419
Query: 423 gacaagagaggaaaacagaattacagagaagatgatgttccaggcaaaggagactgtata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gacaagagaggaaaacagaattacagagaagatgatgttccaggcaaaggagactgtata 359
Query: 483 gaaatatcaaaaaggagcaaaatagagtttactaaagaagagcaagcagttcgatccact 542
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaaatatcaaaaaggagcaaaatggagtttactaaagaagagcaagcagttcgatccact 299
Query: 543 ggcattgaaggagtgaaggatgctttaagaaaaaaggcccgttatgactgctatcaagct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggcattgaaggagtgaaggatgctttaagaaaaaaggcccgttatgactgctatcaagct 239
Query: 603 gtacttactacacatgtgttacagagctggaacac 637
|||||||||||||| ||||||||||||||||||||
Sbjct: 238 gtacttactacacacgtgttacagagctggaacac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_a06.g1 MSMg01no502_a06.g1 CHROMAT_FILE:
MSMg01no502_a06.g1 PHD_FILE: MSMg01no502_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:57 2005
(552 letters)
>mm_chr17_10737848_10738798
Length = 951
Score = 984 bits (509), Expect = 0.0
Identities = 538/553 (97%), Gaps = 11/553 (1%)
Strand = Plus / Plus
Query: 1 tctacccctcaatggcttccttcacagagggatggagagatggctcagtagttaagagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctacccctcaatggcttccttcacagagggatggagagatggctcagtagttaagagta 260
Query: 61 cacattgcccttgcagagaaccaaagtttagttcccagaacccaggcgcaggggatcaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacattgcccttgcagagaaccaaagtttagttcccagaacccaggcgcaggggatcaga 320
Query: 121 gggtggcttctgagctgcacagacacttgtactcacgcatacacataccaggccccaaa- 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtggcttctgagctg--cagacacttgtactcacgcatacacataccaggccccaaac 378
Query: 180 acacaggagttgcgaaagcttttaaaagactctgcagttaggtatctatctgctcttcca 239
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 acacaggagttgcaaaagcttttacaagactctgcagttaggtatctatctgctcttcca 438
Query: 240 gtcttttcctagtgggttactaggacacacgtgcatgtgtgtgtgtgtgtgtgtgtgtgt 299
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 439 gtcttttcctagtgggttactaggacacacgtgca--------tgtgtgtgtgtgtgtgt 490
Query: 300 gtgtgtgtgtgtgtgtgtgtacatgtgtacttgtttcatcttactgtggttctgttttcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtgtgtgtgtgtgtgtgtgtacatgtgtacttgtttcatcttactgtggttctgttttcc 550
Query: 360 aaggaagaacatatgcatcatttcattaaaaccctgcagtatccaatctgctatcgagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaggaagaacatatgcatcatttcattaaaaccctgcagtatccaatctgctatcgagga 610
Query: 420 gcgtttagaagattaaggaatctctatttcagcatcactgctgctatctctggggtacag 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcgtttagaagattaaggaatctttatttcagcatcactgctgctatctctggggtacag 670
Query: 480 tttcttctgtaggaaagagccaaaggcttgactggacccacactggagagatactgtgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tttcttctgtaggaaagagccaaaggcttgactggacccacactggagagatactgtgta 730
Query: 540 tctttaaatactg 552
|||||||||||||
Sbjct: 731 tctttaaatactg 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 951
Length adjustment: 10
Effective length of query: 542
Effective length of database: 941
Effective search space: 510022
Effective search space used: 510022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
