Query= MSMg01no502_o04.b1 MSMg01no502_o04.b1 CHROMAT_FILE:
MSMg01no502_o04.b1 PHD_FILE: MSMg01no502_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(519 letters)
>mm_chr17_73481345_73482263
Length = 919
Score = 949 bits (491), Expect = 0.0
Identities = 512/519 (98%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 tgttagga-ttcctagttgtgttgatatcacagtaccaagtagtttgtcttcctagtaac 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgttaggagttcctagttgtgttgatatcacagtaccaagtagtttgtcttcctagtaac 259
Query: 60 aaagttgtctagaatatgagggactcaggcagatatcaaaataaacatgtgttaaggatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagttgtctagaatatgagggactcaggcagatatcaaaataaacatgtgttaaggatt 319
Query: 120 tcaagtaactcatagtcactgtgagatcaggcacatggttaactggttcaaagaaaaaat 179
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 tcaagtaactcatagtcactgtgagatcatgcacatggttaactggttcaaagaaaaaat 379
Query: 180 aaagcaacccacaaatttatatgggttgaaagaatgaaatggtttgcacatggaacagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaagcaacccacaaatttatatgggttgaaagaatgaaatggtttgcacatggaacagct 439
Query: 240 gtttgtttgttgaggaggggctggggagaggctggaagtccgttgattcttctacctgag 299
||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 gtttggtgggggaggaggggctggggagaggctggaagtccgttggttcttctacctgag 499
Query: 300 agagtggaacctgcttctctcttaggtgtgcctggtgcgcagagtcccggagctgcttct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagtggaacctgcttctctcttaggtgtgcctggtgcgcagagtcccggagctgcttct 559
Query: 360 ctagcatggagtctgtgagatggagggagcgctaggcatggggccagatgttgctgacat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctagcatggagtctgtgagatggagggagcgctaggcatggggccagatgttgctgacat 619
Query: 420 ggttttctttcctggttcctttgagctgtagagggtggagctctggggtacttgcatggt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggttttctttcctggttcctttgagctgtagagggtggagctctggggtacttgcatggt 679
Query: 480 cctctgtgttatggtgggtggagatttgggatggtgtga 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cctctgtgttatggtgggtggagatttgggatggtgtga 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o04.g1 MSMg01no502_o04.g1 CHROMAT_FILE:
MSMg01no502_o04.g1 PHD_FILE: MSMg01no502_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(290 letters)
>mm_chr17_73581892_73582581
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Minus
Query: 1 ccctggctattctggaactcactttgtagaccaggctggcctcgaactcagaaacctgcc 60
|||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 639 ccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatctgcc 580
Query: 61 tacctctgcctcccaagtgctgggattaaaggcgtgcaccaccacgcctggcttgtttgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgcctctgcctcccaagtgctgggattaaaggcgtgcaccaccacgcctggcttgtttgg 520
Query: 121 gttttttttggtatagacattatgctttattatatctgttagtattttgcctcctgatca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tttttttttggtatagacattatgctttattatatctgttagtattttgcctcctgatca 460
Query: 181 tcaaggaggtttttccttttaattaatttatgtgtgtagggtaggtgtggtgagtggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcaaggaggtttttccttttaattaatttatgtgtgtagggtaggtgtggtgagtggagg 400
Query: 241 caagagggtgcaaggtatccttccccatcactctcggcctgctcctctga 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 caagagggtgcaaggtatccttccccatcactctcggcctgctcctctga 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
