GGGCCGGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCCATCTTCCGTGAGAGCCTCTTCAGAGTCCAGTGTGC
ACTGGAGCAAGCAAGAAAAGAGCCTTCAGTACTTTATGGCTTTCTACTTA
TAAGTGAAGCTGCCGGGCTGACCTTCTGCAGCTTATCACTACTCAGGCAA
GGTTGTACGGTGTGCTCTCAGCTTTCCAGGGCCTTGAGACATGTTCCTGC
TTGTCCCTCATGCAAGCCTCTTGCTGTTCCACCCTGTGACCCATAAGATA
CAGCCCTGTGGTACTGCCAAAATGTGCCCAGCTGCAGAGCTGTTTGCCAT
TTGTTAATCTCTCAGATGAGGAGCTGAGCTGACAGAGTGGGCTAGGCCAG
CCTCTGGAGTATCCTCAAGGCTGTGAATTGTAAGGCCCTGGGCAGTCCCA
GCCAGACTAGCACTGAGGGCTTGCACCAATAGATTCTGTCCACTTCTCGC
TGGAGCAGCTGAACAGGCAGCCTGAGGCTATGCATGCAGGTCAAGTGTCA
CATAGGCCTGTCCAGGTACCAATGTTTGGTGAGGTCACTTAACACCACAG
CTGCCACCAGCAGTGAATGCACAAGTTCCTGGAGGGTCAATACTGCCACA
AGCAGAGTGTTTTGGAAGCTGGCAGCAGGGGACCTAACTGATATTCAGAG
TGTAGGGTTGGAGATGCTG

CTAAAACCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGCTCAGAGGAGATAGCCCTA
TACTGTGGAGTGCTGGGTATGGGGAAATAAAGGGATGGGGGAGACCTGAG
TCCCACCAGAGCTCGGGGAGACTGCCATGGGACCCCACGGAAACATCGCA
GGATGGGTGTGGGGCCTCACAGGCCGCAGGACCCCGCTGGGGGCAGGGGA
AGAAGGCATATTCTCAGCTCTGACTCTCGGGCACCATAGACTGCTCGGTA
CCATGGAAGAGACGGTTTGGGGGTTTTGGGGTTCCTGGACCACATGGAGC
CAGGGACGACAGGTTCTCGCTCTCAGACATCCCAGGCCATGGTATGTTGC
AGAAGAGACCCTCAGGCAAACTCTGGTGTGGGGGCCGAAGGGGAAAGGGT
AGGGAGAGAGCTCTAGCAGGTTATCTTGGGGACAAGAGAGTCTGGCTAGC
TCAGGCGGTGAGCGATGAGCTCGCTGGCCTGCTTGGGTTGACTGGCAGCA
ATGGCTGGAGGGCAGGAAGGCCTCCCAGCAGGAGGTTAGGGAAGCCTGCT
CCATTACTCCTCATAACAGATCTCGATGAGCAGACACAGTCCATGGTTTT
AGAGCTTTATTGTAGAAAAGCAGAGAGAGAGAGAGAGAGAGAAGAGTATA
GAGGCAGAGGGTGGGCATGGTCACATG

Query= MSMg01no506_a18.b1 MSMg01no506_a18.b1 CHROMAT_FILE:
MSMg01no506_a18.b1 PHD_FILE: MSMg01no506_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:06 2005
         (667 letters)



>mm_chr17_50118762_50119828
          Length = 1067

 Score = 1214 bits (628), Expect = 0.0
 Identities = 655/666 (98%), Gaps = 6/666 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccatcttcc---gtgagagcctcttcagagtccagtgtgcactggagcaagca 61
           |||||||||| |  ||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gaattctcca-c--ccactgtgagagcctcttcagagtccagtgtgcactggagcaagca 827

                                                                       
Query: 62  agaaaagagccttcagtactttatggctttctacttataagtgaagctgccgggctgacc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 agaaaagagccttcagtactttatggctttctacttataagtgaagctgccgggctgacc 767

                                                                       
Query: 122 ttctgcagcttatcactactcaggcaaggttgtacggtgtgctctcagctttccagggcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ttctgcagcttatcactactcaggcaaggttgtacggtgtgctctcagctttccagggcc 707

                                                                       
Query: 182 ttgagacatgttcctgcttgtccctcatgcaagcctcttgctgttccaccctgtgaccca 241
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 706 ttgagacatgttcctccttgtccctcatgcaagcctcttgctgttccaccctgtgactca 647

                                                                       
Query: 242 taagatacagccctgtggtactgccaaaatgtgcccagctgcagagctgtttgccatttg 301
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 646 taagatacagccctgtggtactgccaaaatgcgcccagctgcagagctgtttgccatttg 587

                                                                       
Query: 302 ttaatctctcagatgaggagctgagctgacagagtgggctaggccagcctctggagtatc 361
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttaatctctcagatgaggagatgagctgacagagtgggctaggccagcctctggagtatc 527

                                                                       
Query: 362 ctcaaggctgtgaattgtaaggccctgggcagtcccagccagactagcactgagggcttg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctcaaggctgtgaattgtaaggccctgggcagtcccagccagactagcactgagggcttg 467

                                                                       
Query: 422 caccaatagattctgtccacttctcgctggagcagctgaacaggcagcctgaggctatgc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 caccaatagattctgtccacttctcgctggagcagctgaacaggcagcctgaggctatgc 407

                                                                       
Query: 482 atgcaggtcaagtgtcacataggcctgtccaggtaccaatgtttggtgaggtcacttaac 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgcaggtcaagtgtcacataggcctgtccaggtaccaatgtttggtgaggtcacttaac 347

                                                                       
Query: 542 accacagctgccaccagcagtgaatgcacaagttcctggagggtcaatactgccacaagc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 accacagctgccaccagcagtgaatgcacaagttcctggagggtcaatactgccacaagc 287

                                                                       
Query: 602 agagtgttttggaagctggcagcaggggacctaactgatattcagagtgtagggttggag 661
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agggtgttttggaagctggcagcaggggacctaactgatattcagagtgtagggttggag 227

                 
Query: 662 atgctg 667
           ||||||
Sbjct: 226 atgctg 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)