Query= MSMg01no506_h17.b1 MSMg01no506_h17.b1 CHROMAT_FILE:
MSMg01no506_h17.b1 PHD_FILE: MSMg01no506_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:42 2005
(650 letters)
>mm_chr17_67732940_67733990
Length = 1051
Score = 1207 bits (624), Expect = 0.0
Identities = 642/648 (99%), Gaps = 1/648 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcacttccttacagcttacaccatttagcaataaattagtcacccaggtcaca 63
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ggaattctcacttccttaaagcttacaccatttagcaataaattagtcacctaggtcaca 263
Query: 64 ctcctgctatgtgtttacatataacttctataccattcatgactccataatagaaacatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcctgctatgtgtttacatataacttctataccattcatgactccataatagaaacatt 323
Query: 124 ctctgttaatatgtgggttgaactggttttatttgaatgccaggctgtatgatcagcagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctctgttaatatgtgggttgaactggttttatttgaatgccaggctgtatgatcagcagt 383
Query: 184 gtgtactgcttggtaaaatttcatcaaagccggtgatcatttttgtttttatcttaatac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtactgcttggtaaaatttcatcaaagccggtgatcatttttgtttttatcttaatac 443
Query: 244 aatgtatacaaagtaccaattaaaaaaaaa-tctgtaggaacaatgcatattgtctggta 302
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 aatgtatacaaagtaccaattaaaaaaaaaatctgtaggaacaatgcatattgtctggta 503
Query: 303 ggggggatgaccctccaaggaaagtcatactccgacagcctgattctgtgattatagcaa 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 ggggggatgaccctccaaggaaagtcatactccaacagcctgattctgtgattatagcaa 563
Query: 363 ggggccaaaaaggtctttgaagctgtgataaagattagaggccttgattatgggttaaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggggccaaaaaggtctttgaagctgtgataaagattagaggccttgattatgggttaaga 623
Query: 423 taaggctggatcctaagtcatttgtcaagtggaaaggtgacaagattgtgtgtatgaggg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaggctggatcctaagtcatttgtcaagtggaaaggtgacaagattgtgtgtatgaggg 683
Query: 483 ggacaagggttctgctgtgggctccacaggcaaaaactagcacaccctcagccagagctc 542
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggacgagggttctgctgtgggctccacaggcaaaaactagcacaccctcagccagagctc 743
Query: 543 acactggcagcccgagggggagtgaccttagtcatgtcaaaagcttgaatgagattccag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acactggcagcccgagggggagtgaccttagtcatgtcaaaagcttgaatgagattccag 803
Query: 603 aagattctttccaaactccactaaagagccctgcgtccatctgtagtt 650
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 804 aagattctttccaaactccactaaagagccccgcgtccatctgtagtt 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space: 666240
Effective search space used: 666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_h17.g1 MSMg01no506_h17.g1 CHROMAT_FILE:
MSMg01no506_h17.g1 PHD_FILE: MSMg01no506_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:42 2005
(597 letters)
>mm_chr17_67903783_67904779
Length = 997
Score = 669 bits (346), Expect = 0.0
Identities = 361/366 (98%)
Strand = Plus / Minus
Query: 5 aaaaaactcttctggactgccttagtatccctgtttgtgccagggtttaatctccattca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaaactcttctggactgccttagtatccctgtttgtgccagggtttaatctccattca 307
Query: 65 atttccctgaagtcctgttcttcgaaggtctgctcccgagatcctgccacccagacattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atttccctgaagtcctgttcttcgaaggtctgctcccgagatcctgccacccagacattt 247
Query: 125 caagagcacgctgtctgctcgtggaaaagcacaaaggaaacctgtaatggtttgtagatg 184
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 246 caagagcatgctgtctgctcgtggaaaagcacaaaggaaacctgtaatagtttgtagatg 187
Query: 185 cttgggccaggaagtagtactatttggcggtgtggccttgtgtgagtaggtgtgccattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cttgggccaggaagtagtactatttggcggtgtggccttgtgtgagtaggtgtgccattg 127
Query: 245 tgggcaggggcttaagaccctcatcctttctgcctggaagacagtctttcactagcagcc 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 126 tgggcaggggcttaagaccctcatcctttctgcctggaagacagtcttccactagcagcc 67
Query: 305 ttcagatgaagatatagttagctctgcctgcaccactatctgcctagatgctactatgct 364
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 66 ttcagatgaagatatagttagctctgcctgcaccagtatcttcctagatgctactatgct 7
Query: 365 cccacc 370
||||||
Sbjct: 6 cccacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
