Query= MSMg01no508_d08.b1 MSMg01no508_d08.b1 CHROMAT_FILE:
MSMg01no508_d08.b1 PHD_FILE: MSMg01no508_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:02 2005
(639 letters)
>mm_chr17_55493226_55494264
Length = 1039
Score = 1228 bits (635), Expect = 0.0
Identities = 635/635 (100%)
Strand = Plus / Plus
Query: 5 gaattcttagttaatgattgatgtataagagcccagcccactgtgggtagtgctagtcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttagttaatgattgatgtataagagcccagcccactgtgggtagtgctagtcct 264
Query: 65 gagtaggtggtcctgggcaacataagaaagcaagccgagcacgagcacgccactgagaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagtaggtggtcctgggcaacataagaaagcaagccgagcacgagcacgccactgagaga 324
Query: 125 tcaagccagtaagccacattccttcacagattctgttttagccactgcctcctgattgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaagccagtaagccacattccttcacagattctgttttagccactgcctcctgattgct 384
Query: 185 gccttgagtgcctaccatggctatcctgagtaatgaaaagtgacccgaggattattagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccttgagtgcctaccatggctatcctgagtaatgaaaagtgacccgaggattattagat 444
Query: 245 gaaggaagccctttcctcttttagctgattttaatcatagtttcttaacacagcaaagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaggaagccctttcctcttttagctgattttaatcatagtttcttaacacagcaaagaa 504
Query: 305 aaccaatgtaggacactataacacttataattacccttattaatgcatcatagaataaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaccaatgtaggacactataacacttataattacccttattaatgcatcatagaataaac 564
Query: 365 attatctcattttatgtccacatgattgtaaaagaaatgatagaaatctcagtgataatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attatctcattttatgtccacatgattgtaaaagaaatgatagaaatctcagtgataatg 624
Query: 425 attagatagtaggagctgaccattgtaaatagataatagaaataaaaaatatttatatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attagatagtaggagctgaccattgtaaatagataatagaaataaaaaatatttatatct 684
Query: 485 ttaatattttagtttctgtcttagtcagggtttctattcctggacaaaacatcatgacca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttaatattttagtttctgtcttagtcagggtttctattcctggacaaaacatcatgacca 744
Query: 545 agaagcaagttggggaggaaagggtttattcagcttacacttccatactgctgttcatca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaagcaagttggggaggaaagggtttattcagcttacacttccatactgctgttcatca 804
Query: 605 tcaagggaagtcaggactggaattcaagcaggtca 639
|||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaagggaagtcaggactggaattcaagcaggtca 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_d08.g1 MSMg01no508_d08.g1 CHROMAT_FILE:
MSMg01no508_d08.g1 PHD_FILE: MSMg01no508_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:02 2005
(419 letters)
>mm_chr17_55666364_55667182
Length = 819
Score = 774 bits (400), Expect = 0.0
Identities = 414/424 (97%), Gaps = 10/424 (2%)
Strand = Plus / Minus
Query: 1 tttgtgatattaggagtccattgaggttctgtaagttacttccaaagggagggactgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttgtgatattaggagtccattgaggttctgtaagttacttccaaagggagggactgatt 560
Query: 61 cacctcaggcagtgctgcaaagctatatgcgatgtactatactaagatcctggaaaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cacctcaggcagtgctgcaaagctatatgcgatgtactatactaagatcctggaaaccac 500
Query: 121 agtgaatctatagatattactgaactctaatcattgatatagaaaggaaggagagttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtgaatctatagatattactgaactctaatcattgatatagaaaggaaggagagttgtt 440
Query: 181 gggctggtttgatgcagaacatccttgtaaggtatctacatatgtgtagctatcatgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gggctggtttgatgcagaacatccttgtaaggtatctacatatgtgtagctatcatgtgt 380
Query: 241 tcttgaa-----tttttagcagactcatttgcccagcctgaggaatcatcttagaacaag 295
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcttgaaggaag-----agcagactcatttgcccagcctgaggaatcatcttagaacaag 325
Query: 296 agagggctgccaaactataaaactcaatttattcaccaacacagagatccttccaacaat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agagggctgccaaactataaaactcaatttattcaccaacacagagatccttccaacaat 265
Query: 356 cttactctaagtgcggcagctatctactttccctcatgatatctaagagacctgggaaga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttactctaagtgcggcagctatctactttccctcatgatatctaagagacctgggaaga 205
Query: 416 ctgt 419
||||
Sbjct: 204 ctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
