Query= MSMg01no511_p14.b1 MSMg01no511_p14.b1 CHROMAT_FILE:
MSMg01no511_p14.b1 PHD_FILE: MSMg01no511_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:58 2005
(485 letters)
>mm_chr17_82702793_82703677
Length = 885
Score = 922 bits (477), Expect = 0.0
Identities = 483/485 (99%)
Strand = Plus / Plus
Query: 1 agtgttcctgcaagtgcaggcctttccacacagatatggggaaagagaatgtttccagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgttcctgcaagtgcaggcctttccacacagatatggggaaagagaatgtttccagag 260
Query: 61 tagtaaaatccagtttaattcctgacattacagtcgcacagctaaccagatgagagccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtaaaatccagtttaattcctgacattacagtcgcacagctaaccagatgagagccag 320
Query: 121 actggctagctgtgcaaataacatcagagaagcaacagggaacaacagaagcaagggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggctagctgtgcaaataacatcagagaagcaacagggaacaacagaagcaagggctt 380
Query: 181 tgttggccactgtcactagacttgccttgatgctgtgtttagctgactgactacatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttggccactgtcactagacttgccttgatgctgtgtttagctgactgactacatggaa 440
Query: 241 gaccaacatctcatatgctcacattatgagcctggctattctatttccttccataattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaccaacatctcatatgctcacattatgagcctggctattctatttccttccataattga 500
Query: 301 ggacctttgtgatttcctaggacaatccaccagagccaaaacagaccttgccttacaggt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacctttgtgatttcctaggacaatccaccagagccaaaacagaccttgccttacaggt 560
Query: 361 aactgattagtggtcactttcattccaccagcaacctgcacttgtctatactaggggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactgattagtggtcactttcattccaccagcaacctgcacttgtctatactaggggatg 620
Query: 421 tgcacattcccacattcgagggggagcagtgttctgcttgtctcaaagcctaaataaaaa 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 tgcacattcccacattcgagggggagcagtgttctgcttgtcgcaaagcctaaataaaaa 680
Query: 481 tgagt 485
|||||
Sbjct: 681 tgagt 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_p14.g1 MSMg01no511_p14.g1 CHROMAT_FILE:
MSMg01no511_p14.g1 PHD_FILE: MSMg01no511_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:58 2005
(400 letters)
>mm_chr17_82847812_82848611
Length = 800
Score = 603 bits (312), Expect = e-177
Identities = 357/378 (94%), Gaps = 11/378 (2%)
Strand = Plus / Minus
Query: 23 taacaattaaaaaattggagttaagagatgactctgtttaagaacatgtacagaggttga 82
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 taacaatt-aaaaataggagttaagagatgactctgtttaagaacatgtacagaggttga 738
Query: 83 agagttcttgggattgattctgagcatttatgcttgtacaattcacaactgctcacaact 142
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 737 agagttcttgggattgattctgagcatttatgcttgtacaattcacaactgttcacaact 678
Query: 143 cagcactatcttctggcctccttgggtacttacttgtacttgcatgtatgcatccacaca 202
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 677 cagcactatcttctggcctccttgg----------gtacttgcatgtatgcatccacaca 628
Query: 203 cagatacataatttaaaataaaataaagtaaaaccaaaaataagtgagagtaggattgga 262
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cagacacataattaaaaataaaataaagtaaaaccaaaaataagtgagagtaggattgga 568
Query: 263 ggttgatgggaaggttgatgtgtgggaaggcttaatagataacatgttcctcctgccctc 322
|||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||
Sbjct: 567 agttgatgggaaggttgatatgtgggaaggcttaagagataacatggtcctcctgccctc 508
Query: 323 gtgatctccagctgacataggtccacgacgaatggggatttggaagcacagtgagtatgt 382
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 507 gtgatctccagctgacataggtccaggacgaatggggatttggaagcacagtgagtatgt 448
Query: 383 acaatgaatgatgacaac 400
||| ||||||||||||||
Sbjct: 447 acagtgaatgatgacaac 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
