Query= MSMg01no514_m10.b1 MSMg01no514_m10.b1 CHROMAT_FILE:
MSMg01no514_m10.b1 PHD_FILE: MSMg01no514_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:48 2005
(690 letters)
>mm_chr17_62558586_62559675
Length = 1090
Score = 1253 bits (648), Expect = 0.0
Identities = 675/684 (98%)
Strand = Plus / Minus
Query: 7 gaattctctcctgtttcaccaataaagtaccgatattgcttctgcacacacatttaggaa 66
||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 890 gaattctctcctgcttgaccaaaaaagtaccgatattgcttctgcacacacatttaagaa 831
Query: 67 cttctaatagaagatctcattggtgattattgcctcttaggctgtgtctgtatgacctta 126
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 830 cttctcatagaagatctcattggcaattattgcctcttaggctgtgtctgtatgacttta 771
Query: 127 agacctcttgcaggatagtggaaggatcttgatttttcttatttgatctgatcaattgct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agacctcttgcaggatagtggaaggatcttgatttttcttatttgatctgatcaattgct 711
Query: 187 taacaatcaattatgttgtggttagtttgatattcttaagcagatttatctctaaattcc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 taacaatcaattatgttgtggttagtttgatattcttaagcagatttatctctaaattcc 651
Query: 247 aatttaatgagtaggttggtttctttataagagaaagtctctaatattatgtgattaaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aatttaatgagtaggttggtttctttataagagaaagtctctaatattatgtgattaaaa 591
Query: 307 ttgcttcttaaaaatattatgagcatttaggcagcttaaggacatgggatattatgatga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttgcttcttaaaaatattatgagcatttaggcagcttaaggacatgggatattatgatga 531
Query: 367 tttaaaacaaagaataaacattcacttaatattgtaagaagagaaggtataggagcaagt 426
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 530 tttaaaacaaagaataaacattcacttaatattgtaagaagagaaggtacaggagcaagt 471
Query: 427 attttctaggtatattaaaatgactgcctatttctcttgggttcaagcttctcataaata 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 attttctaggtatattaaaatgactgcctatttctcttgggttcaagcttctcataaata 411
Query: 487 tattggaattaggaaatatagctaatcctttaactccagtatgaatttcttctttcataa 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tattggaattaggaaatatagctaatcctttaactccagtatgaatttcttctttcataa 351
Query: 547 gcaagatgaaggaggcaaaatgatttctccaacagagaggcagaactgaaaaatgagctt 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcaagatgaaggaggcaaaatgatttctccaacagagaggcagaactgaaaaatgagctt 291
Query: 607 tggtcttccaatttaagtgaaagcaaacttactgaactcattattatgtacatggtatat 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggtcttccaatttaagtgaaagcaaacttactgaactcattattatgtacatggtatat 231
Query: 667 gcttacattttatttctatgaggt 690
||||||||||||||||||||||||
Sbjct: 230 gcttacattttatttctatgaggt 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_m10.g1 MSMg01no514_m10.g1 CHROMAT_FILE:
MSMg01no514_m10.g1 PHD_FILE: MSMg01no514_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:48 2005
(664 letters)
>mm_chr17_62494629_62495692
Length = 1064
Score = 1214 bits (628), Expect = 0.0
Identities = 656/666 (98%), Gaps = 2/666 (0%)
Strand = Plus / Plus
Query: 1 tttgggacttattcttgcttcctgctccttgaagttacaatttctgctatatagctatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgggacttattcttgcttcctgctccttgaagttacaatttctgctatatagctatta 260
Query: 61 attgtgggatggatgtcaggaaatgatccaatgaacagaaaggtcacagggaatgctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtgggatggatgtcaggaaatgatccaatgaacagaaaggtcacagggaatgctaac 320
Query: 121 ctctcttaaatgacatgtgtctccagtgctgtgtgactctaacactcggttagttcatat 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctcttaaatgacatgtatctccagtgctgtgtgactctaacactcggttagttcatat 380
Query: 181 tttcaaatatgtaatttttcttaggacattgatcacatcgttgtactatccctctctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcaaatatgtaatttttcttaggacattgatcacatcgttgtactatccctctctaat 440
Query: 241 gtcgatgacctttcttctctatcataggctaccttagtagttatcagtctcccttttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcgatgacctttcttctctatcataggctaccttagtagttatcagtctcccttttttc 500
Query: 301 tgtgattcttcatttttgctctctaatgttgactaatttgcatcgttttcagctaatgct 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgattcttcatttttgctctctagtgttgactaatttgcatcgttttcagctaatgct 560
Query: 361 ttataagttttccataatatacattaaataggtttatatagcataatatatgtatatgtg 420
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tcataagttttccataatatacattaaataggtttatatagcatgatatatgtatatgtc 620
Query: 421 ataaatgcatatgtgatatatatgtgacacatatcgcatgtatatacctatttaatgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaatgcatatgtgatatatatgtgacacatatcgcatgtatatacctatttaatgcat 680
Query: 481 gtacatatttaatgtatatgcatgtgctatatatatgtgtgtgttcatatatagcatata 540
|||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 681 gtacatatttaatgtatatgcatgtgctatatgtatatatgtgttcatatatagcatata 740
Query: 541 agttgggagcgtatgtatatatatgtgtgtgtgt--atacacatatataattttgtaaag 598
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 741 agttgggagcgtatgtatatatatgtgtgtgtgtgtatacacatatataattttgtaaag 800
Query: 599 ttgattcctgatttctatagaaagcatactaaaagagcaagaagtcattctaaaaatttt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttgattcctgatttctatagaaagcatactaaaagagcaagaagtcattctaaaaatttt 860
Query: 659 gagctg 664
||||||
Sbjct: 861 gagctg 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
