Query= MSMg01no517_f10.b1 MSMg01no517_f10.b1 CHROMAT_FILE:
MSMg01no517_f10.b1 PHD_FILE: MSMg01no517_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:23 2005
(610 letters)
>mm_chr17_61716658_61717667
Length = 1010
Score = 905 bits (468), Expect = 0.0
Identities = 471/472 (99%), Gaps = 1/472 (0%)
Strand = Plus / Minus
Query: 5 gaattcacagtgtcatttaatatttaatatgttcatgtcctaaccagtatctagcatggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaattcacagtgtcatttaatatttaatatgttcatgtcctaaccagtatctagcatggc 412
Query: 65 tatcaaagagaaataccatggaagtgtccttggctctttacacaggctgctggagtttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tatcaaagagaaataccatggaagtgtccttggctctttacacaggctgctggagtttta 352
Query: 125 tcttccataataacctcaggagaattccaggagccagtactgcatcaatcctgtagactc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcttccataataacctcaggagaattccaggagccagtactgcatcaatcctgtagactc 292
Query: 185 tttgcttgttgctattataatctttaactaaagcttgtctgtaacacttttttttctatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttgcttgttgctattataatctttaactaaagcttgtctgtaacacttttttttctatt 232
Query: 245 tccaaatcttttactttttattagatatttttttatatttttattaggtattttcctcat 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 231 tccaaatcttttactttttattagata-ttttttatatttttattaggtattttcctcat 173
Query: 305 ttacatttccaatgctatccccaaagtcccccataccctcccccccactcccctacctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ttacatttccaatgctatccccaaagtcccccataccctcccccccactcccctacctgc 113
Query: 365 ccactcccactttttggccctggagttcctctgtactggggcacataaagtttgcatgtc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ccactcccactttttggccctggagttcctctgtactggggcacataaagtttgcatgtc 53
Query: 425 caatgggcctctctttccagtgatggccgactaggccatcttttgatacata 476
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Sbjct: 52 caatgggcctctctttccagtgatggccgactaggccatcttttgatacata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_f10.g1 MSMg01no517_f10.g1 CHROMAT_FILE:
MSMg01no517_f10.g1 PHD_FILE: MSMg01no517_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:23 2005
(165 letters)
>mm_chr17_61623684_61624248
Length = 565
Score = 261 bits (135), Expect = 1e-74
Identities = 150/155 (96%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 ccttactaactagtgagttttcataagcctctttacatacattcttattttaggctagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttactaactagtgagttttcataagcctctttacatacattcttattttaggctagcc 260
Query: 61 cacacctagctcctacccttcattcttttttgtttgtttgttttaatggttttttttgtt 120
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 261 cacacctagctcctacccttcattcttttttatttgtttgttttaatgtttttttttgtt 320
Query: 121 gttgttgttgttttgttttgtttgttttttgggtt 155
||||| ||||||||||||||||||||| ||||||
Sbjct: 321 -ttgtt-ttgttttgttttgtttgttttctgggtt 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
