XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACAAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACCTAATCACAAAAGAACTCAAATGAAATGTACTCACTGATAAGTG
GATATTAACCCAGAAACTTAGTATAGCGAGATATAAGGTACAATATGTAA
AACATATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCTC
ATTCTTAGAATTGGAAACAATCACCCATGGAAGGAATTACAGAGACAAAG
TTTGGAGCTGAGACAAAAGGATGGTCCATCTAGAGACTGCCATATCCAGG
GATCCATCCCATAATTAGCCTCCAAGCGATGACACCATTGCATACACTAG
CAAGCCTTTGTTGGAAGGATGGTGATATAGCTGTCCCTTGTGAGACTAGG
CCGGGGCCTAGCAAACACAAAAGTGGATGCTCACAGTCAACTATTGGATG
GATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAA
AGAGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACC
CCAGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGACCTAGTTGG
CCATCACTGGAAAGACAGGCCCATTGGTCAGGCAAACGTTATATGCCCCA
GTACAGGGGAATGCCAGGGTCAAAAAATGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXTTTCTCGCGAAATTCACTAGTACTGAGCCCCTGGGTCTGTTTAGTAAT
TACTATCTATGACAATCACATAAGCTCAAAAACAAAACAAACAAAATCAA
CATTTTCCTCCTTGTCCTCAGCTTGAGTAAGCTGATAGAAGCAAGCTCAG
GTGGAAGCAGGGCCTGTCCTGGCTGCATAGACCCCAAGGCTTACCTGCCA
ACCCTAGCTAGTCCTTGACCCTGGGCCTTCTGGGTCAGTGAGTGAAAATA
GGCAGCTGGTCTGTGTGGCCTAGGGTGAGCCATTTGCAGACAACTGTGGC
TAGGAGAGTAGGTGCATGGTACCCCAGGCTGGTCACTTCTGGCCGTAGGT
GGCACAAGATTCTAAGTAGGAGCTCTGAGCAAGGAGGAAAAGGTGGGCCT
CTTCATTATCAAAGCTCCTAGGTCAGCAGTAAGTTGTGAGCATGTGAGAG
ATTTAACAGACTTGCTCTGGGAGTTGTGTGGCATGTTGAACGTACTCCTA
CACATTATCTTTCCTTAAGGGACGCCAACAATCCTGTATATGGTCATATG
TCAGGGCGACTCGGGTGGAGTAGAGCACATGGCAGGCCTGACAGGTCAGC
GTTACAGAGCCAAAGATTCTGTCATTGGGTGACAGGCGTGGCTGACCTTT
CCTGAGTGCACACACGGAAGCTCTCATGT

Query= MSMg01no519_m05.g1 MSMg01no519_m05.g1 CHROMAT_FILE:
MSMg01no519_m05.g1 PHD_FILE: MSMg01no519_m05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:35 2005
         (569 letters)



>mm_chr17_8333594_8334562
          Length = 969

 Score = 1085 bits (561), Expect = 0.0
 Identities = 567/569 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcactagtactgagcccctgggtctgtttagtaattactatctatgacaatcacataag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ttcactagtactgagcccctgggtctgtttagtaattactatctatgacaatcacataag 710

                                                                       
Query: 61  ctcaaaaacaaaacaaacaaaatcaacattttcctccttgtcctcagcttgagtaagctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ctcaaaaacaaaacaaacaaaatcaacattttcctccttgtcctcagcttgagtaagctg 650

                                                                       
Query: 121 atagaagcaagctcaggtggaagcagggcctgtcctggctgcatagaccccaaggcttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 atagaagcaagctcaggtggaagcagggcctgtcctggctgcatagaccccaaggcttac 590

                                                                       
Query: 181 ctgccaaccctagctagtccttgaccctgggccttctgggtcagtgagtgaaaataggca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 589 ctgccaaccctagctagtccttgaccctgggccttctgggtcagtgagtgaaaatgggca 530

                                                                       
Query: 241 gctggtctgtgtggcctagggtgagccatttgcagacaactgtggctaggagagtaggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gctggtctgtgtggcctagggtgagccatttgcagacaactgtggctaggagagtaggtg 470

                                                                       
Query: 301 catggtaccccaggctggtcacttctggccgtaggtggcacaagattctaagtaggagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 catggtaccccaggctggtcacttctggccgtaggtggcacaagattctaagtaggagct 410

                                                                       
Query: 361 ctgagcaaggaggaaaaggtgggcctcttcattatcaaagctcctaggtcagcagtaagt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 409 ctgagcaaggaggaaaaggtgggcctcttcattatcaaagctcctaggtcaggagtaagt 350

                                                                       
Query: 421 tgtgagcatgtgagagatttaacagacttgctctgggagttgtgtggcatgttgaacgta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgtgagcatgtgagagatttaacagacttgctctgggagttgtgtggcatgttgaacgta 290

                                                                       
Query: 481 ctcctacacattatctttccttaagggacgccaacaatcctgtatatggtcatatgtcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctcctacacattatctttccttaagggacgccaacaatcctgtatatggtcatatgtcag 230

                                        
Query: 541 ggcgactcgggtggagtagagcacatggc 569
           |||||||||||||||||||||||||||||
Sbjct: 229 ggcgactcgggtggagtagagcacatggc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)