Query= MSMg01no519_p13.b1 MSMg01no519_p13.b1 CHROMAT_FILE:
MSMg01no519_p13.b1 PHD_FILE: MSMg01no519_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:52 2005
(629 letters)
>mm_chr17_87239574_87240602
Length = 1029
Score = 1143 bits (591), Expect = 0.0
Identities = 622/643 (96%), Gaps = 17/643 (2%)
Strand = Plus / Plus
Query: 4 ggaattccaccaatagccagagactaaggcaacaagtccc-----------------tga 46
||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 187 ggaattccaccaaaagccagagactaaggcaacaagtcccacgagtcgaaatgaccctga 246
Query: 47 gagagagccctgaggagatccacctcacacctagtcggtctctcctctgggggcagcata 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gagagagccctgaggagatccacctcacacctagtcggtctctcctctgggggcagcata 306
Query: 107 ctcgttccctgggacaggcacttgatgcaacgtttctcttacatcaagagctaacttgca 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 307 ctcgttccctgggacaggcacttgatgcaacgtttctcttacatcaagagctaacgtgca 366
Query: 167 gagaaatacacctttaggacagccccacgaggcacagccagatgccaactgaagatggac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagaaatacacctttaggacagccccacgaggcacagccagatgccaactgaagatggac 426
Query: 227 aggtgacggagtccctgggagaagtctgattcgtcacatctctcccttaccatcaccctc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aggtgacggagtccctgggagaagtctgattcgtcacatctctcccttaccatcaccctc 486
Query: 287 agggcatgtggtctaaattcaggggtggatctgtgacacaaatgacaacatacctcaatg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agggcatgtggtctaaattcaggggtggatctgtgacacaaatgacaacatacctcaatg 546
Query: 347 gcttctctgtcaaaggtctctactggatcgaattacaggagggacctcaagaaaatttca 406
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 547 gcttctctgtcaaaggtctctactggatcgaattatgggagggacctcaagaaaatttca 606
Query: 407 aaggaggaaaattcttcagacgaagctcacccctgtccttcaaagtgccagcctctccca 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaggaggaaaattcttcagacgaagctcacccctgtccttcaaagtgccagcctctccca 666
Query: 467 gaacagatatggtgaacatggtctctattaaggacaaccagaggacaattaaatatagtg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gaacagatatggtgaacatggtctctattaaggacaaccagaggacaattaaatatagtg 726
Query: 527 tcaccctttaggatgcaacaccagaaatgaagatacttgcaaaaaccaagaaaatctgaa 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcaccctttaggatgcaacaccagaaatgaagatacttgcaaaaaccaagaaaatctgaa 786
Query: 587 caaagtaagggctttcattcccaaaaatgtgccatttccttcc 629
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 caaagtaagggctttcattcccaaaaatgtgccatttccttcc 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_p13.g1 MSMg01no519_p13.g1 CHROMAT_FILE:
MSMg01no519_p13.g1 PHD_FILE: MSMg01no519_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:52 2005
(518 letters)
>mm_chr17_87415751_87416667
Length = 917
Score = 924 bits (478), Expect = 0.0
Identities = 505/514 (98%), Gaps = 1/514 (0%)
Strand = Plus / Minus
Query: 1 tcatatgtagtatgatctaactaaagcgaatatgtgctcttcagggttattgcagagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tcatatgtagtatgatctaactaaagcgaatatgtgctcttcagggttattgcagagtga 654
Query: 61 ggaagacaatcaaatccaatagcaagtgtttgttaagtgggctaacaaataccagcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggaagacaatcaaatccaatagcaagtgtttgttaagtgggctaacaaataccagcagca 594
Query: 121 cctgtgtatcacttctccagcccggacagtttgtctcagtagttacggttggtttgaaac 180
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tctgtgtaccacttttccagcccggacagtttgtctcagtagttacggttggtttgaaac 534
Query: 181 agaccagcaagtgcagtacttagatactcagagaggagtaaggctctgccagctaattcg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agaccagcaagtgcagtacttagatactcagagaggagtaaggctctgccagctaattca 474
Query: 241 gtgtgatgtgcacaaaaacctggtcctgggtggagcagaaggcattatggctccacattc 300
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtgtgatgggcacatggacctggtcctgggtggagcagaaggcattatggctccacattc 414
Query: 301 gttagtgtggttacctgcgataaaatgagcctgggatgctgagggtgagcaggcctactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gttagtgtggttacctgcgataaaatgagcctgggatgctgagggtgagcaggcctactt 354
Query: 361 tgaactgacatgacatcccacccagcttcaaatcagtattaacactttgtactcttttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgaactgacatgacatcccacccagcttcaaatcagtattaacactttgtactcttttaa 294
Query: 421 ctgagatgactaaggtttgatttacttttattcgtttattcatttttatgtatatgagtt 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctgagatgactaag-tttgatttacttttattcgtttattcatttttatgtatatgagtt 235
Query: 481 ttgtgctttcatatatgtgtgtgccacatgcatc 514
||||||||||||||||||||||||||||||||||
Sbjct: 234 ttgtgctttcatatatgtgtgtgccacatgcatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space: 460756
Effective search space used: 460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
