Query= MSMg01no524_i23.b1 MSMg01no524_i23.b1 CHROMAT_FILE:
MSMg01no524_i23.b1 PHD_FILE: MSMg01no524_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:52 2005
(546 letters)
>mm_chr17_44681663_44682608
Length = 946
Score = 665 bits (344), Expect = 0.0
Identities = 350/352 (99%)
Strand = Plus / Minus
Query: 195 agtgtgtgaagcccgcctgcctgggtgtgacccagcttcactgcttcctcgtgtgactcc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 agtgtgtgaagcccgcctgcctgggtgtgacccagcttcactgcttcctcgtgtgactcc 883
Query: 255 ttcaccaagttgctcaaaccctctgagcctctgcttcataatctagagacggggatagta 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ttcaccaagttgctcaaaccctctgagcctctgcttcataatctagagacggggatagta 823
Query: 315 ataggacctctcccttcagagggttgtgacctaagtgagacctccatgtgttctgcacgg 374
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 822 ataggacctctcccttcagagggctgtgacctaagtgagccctccatgtgttctgcacgg 763
Query: 375 agaacagctcctggcaggaggtaaattccacagccgtgctagctttcatttctctgctgg 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agaacagctcctggcaggaggtaaattccacagccgtgctagctttcatttctctgctgg 703
Query: 435 agttatccccccaccactcgctcctctgtgcacaatccttttctagggtttcttgtcttc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agttatccccccaccactcgctcctctgtgcacaatccttttctagggtttcttgtcttc 643
Query: 495 tgagtttcgtaacgctcacacaagcacacgtgactatcaggtcttttctcat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgagtttcgtaacgctcacacaagcacacgtgactatcaggtcttttctcat 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_i23.g1 MSMg01no524_i23.g1 CHROMAT_FILE:
MSMg01no524_i23.g1 PHD_FILE: MSMg01no524_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:52 2005
(571 letters)
>mm_chr17_44511736_44512706
Length = 971
Score = 1083 bits (560), Expect = 0.0
Identities = 569/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 attgtcaaactggtaaccattggcttgaactgaagtcagttctataaaccttattatcca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 attgtcaaactggtaaccattggcttgaactgaagtcagttctgtaaaccttattatcca 259
Query: 61 tttgaagccaaaaaggagacaaacaattcgatatcccagctgccgttaatgtgtacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttgaagccaaaaaggagacaaacaattcgatatcccagctgccgttaatgtgtacactt 319
Query: 121 tcatcaaagctaacctccctcggtaggctggaggagccaagatccattcctggtacccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcatcaaagctaacctccctcggtaggctggaggagccaagatccattcctggtacccag 379
Query: 181 gctgaatagctctcaactgcctaaaactccagctccaggggttacaatcttttctggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctgaatagctctcaactgcctaaaactccagctccaggggttacaatcttttctggcct 439
Query: 241 ttgtgggtaaaccacagacatgtgtgcttatcctcatacagacacatatgcacaaataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgtgggtaaaccacagacatgtgtgcttatcctcatacagacacatatgcacaaataaa 499
Query: 301 aacaattttggaacacaaaagaatcttaaaaaaaa-cctcttaaataaaaaattaaatta 359
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 aacaattttggaacacaaaagaatcttaaaaaaaaacctcttaaataaaaaattaaatta 559
Query: 360 gttaggcaaaatgttttataattattaaaaaaataacctcctctcttacttaatataaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gttaggcaaaatgttttataattattaaaaaaataacctcctctcttacttaatataaca 619
Query: 420 atcctttgatgtcatgcacctccacaaagaacattagaaatatctatatcagagagccag 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 atcctttgatgtcatgcacctccacaaagagcattagaaatatctatatcagagagccag 679
Query: 480 ggcagaggggggagtttgataaaaggtgtggcagagatatagagatatttgacatccttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggcagaggggggagtttgataaaaggtgtggcagagatatagagatatttgacatccttg 739
Query: 540 tgagttcagggtaccattgttaagtatcagga 571
||||||||||||||||||||||||||||||||
Sbjct: 740 tgagttcagggtaccattgttaagtatcagga 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
