GGGGAATTTGTGANNCGCCCCCCTATAAATAAATTTGGCGGGGCCGCTTA
TACGAACTCCCTTAATAGGTAGAGGATCGCGGAATTCAATTCATATCTTG
AGTCAGGCTACAAACTCTAAATCCACTCCTTTCAGGATTCAATGCCCCTG
GAAGAACAAGAAGCTTTATTTTCAAACTTTAAAGGGATTTCCCCGGGAAA
AATTTTTTCAAATGGGAAAAAAAAAAGTTCTCCAAAAAAAAAAAAAAAAG
GGGGGGTTTTTTTTGGGGGGGTTTAAAAAAAAAAAAGAGTTTTGGGGGGC
CAAAAAAAAAAAACCACATTTTCCTCCCCCCGGGGGTTTTATAAAAAAAA
AAATAAATNGGGGGGGGGGGTCTCTTCCCCGGGGGTGGTAAAAAAAAAAA
ACAGTATCATNTAACTAAAAAAAAAACCACTCCCCCTTGGAAAAAAAAAA
AGAAAAATTTAAGAATACCCACCCCCCCCCCCCCCTTTCNNNTTAAAAAA
AAAAAAAANCNCCCACCCTCTCATAAAAAAAAAAAAAGGGGCCGCCCCCC
CCCCCCCTCCCCTGCCCCGGCCGCGGGGCGGGGGGGCGGGGGGGGGGTTT
NTNTTTTTACAAAAAAGCCAGCTTACAACCACC

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATCCCAAAGAACTATTTCTACAGAAGTCCACA
TCCTCCTTTGCCCTATTAGCTTTTCCTTTCCATTATCTCTGGTGGGTGAT
GGGCAAGAATGCAGGTTAAAGCGTTTAAGTACATTTATTAAGGTAGGTTT
TGAAAAATATAAGTCTATGAGCACTTTGGGCCCAAGTCTGGCAATAGGAA
AGTGTTTTGGTAGGGAGGCAGTTTCGGAGCACCTTTCAGCAACTTGCTAA
TTCTGTTCAGATGCTAACTCTAATTGTAGCACAGGAAGTGACATTCTGTG
TAACATGCAATTGCGTCCAATTGTATTTTGAATTTCATTGTGTTTAAATA
AGATTCACAAATCTTGCTTGAGACCATTTTTGTATGTAATAACATTACAT
TTGGATAATGCATGGAGATTTTCAATAACAAGAGAAATAAATGCAAAAGA
TATACAATGTAACATTGTGTGGTTCACCAACACATAAAATAGCATTTTTC
ACCATTCCCTAAAAATATCGAGCCAATTTGGAGAAAATGACTTTAAACTT
AGTAGAACTTTACAAAAACACCTCTAAATATTATTATTATGTAAGTTAAT
ATAACATAAAATACATTATAAATCCAACAGTAAATAGGCAATATTAATAA
TTTCCAGATAAGACATTGTTGAGATTTTTAAAGAAATTCATGCTGATTCT
CTTAGCG

Query= MSMg01no524_o16.g1 MSMg01no524_o16.g1 CHROMAT_FILE:
MSMg01no524_o16.g1 PHD_FILE: MSMg01no524_o16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:20 2005
         (641 letters)



>mm_chr17_83070840_83071880
          Length = 1041

 Score = 1208 bits (625), Expect = 0.0
 Identities = 637/641 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcccaaagaactatttctacagaagtccacatcctcctttgccctattagcttttcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 atcccaaagaactatttctacagaagtccacatcctcctttgccctattagcttttcctt 846

                                                                       
Query: 61  tccattatctctggtgggtgatgggcaagaatgcaggttaaagcgtttaagtacatttat 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 845 tccattatctctggtgggtgatgggcaagaatgcaggttaaagcatttaagtacatttat 786

                                                                       
Query: 121 taaggtaggttttgaaaaatataagtctatgagcactttgggcccaagtctggcaatagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 785 taaggtaggttttgaaaaatataagtctatgagcactttgggcccaaatctggcaatagg 726

                                                                       
Query: 181 aaagtgttttggtagggaggcagtttcggagcacctttcagcaacttgctaattctgttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aaagtgttttggtagggaggcagtttcggagcacctttcagcaacttgctaattctgttc 666

                                                                       
Query: 241 agatgctaactctaattgtagcacaggaagtgacattctgtgtaacatgcaattgcgtcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agatgctaactctaattgtagcacaggaagtgacattctgtgtaacatgcaattgcgtcc 606

                                                                       
Query: 301 aattgtattttgaatttcattgtgtttaaataagattcacaaatcttgcttgagaccatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aattgtattttgaatttcattgtgtttaaataagattcacaaatcttgcttgagaccatt 546

                                                                       
Query: 361 tttgtatgtaataacattacatttggataatgcatggagattttcaataacaagagaaat 420
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tttgtatgtaataacattaaatttggataatgcatggagattttcaataacaagagaaat 486

                                                                       
Query: 421 aaatgcaaaagatatacaatgtaacattgtgtggttcaccaacacataaaatagcatttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaatgcaaaagatatacaatgtaacattgtgtggttcaccaacacataaaatagcatttt 426

                                                                       
Query: 481 tcaccattccctaaaaatatcgagccaatttggagaaaatgactttaaacttagtagaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcaccattccctaaaaatatcgagccaatttggagaaaatgactttaaacttagtagaac 366

                                                                       
Query: 541 tttacaaaaacacctctaaatattattattatgtaagttaatataacataaaatacatta 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 365 tttacaaaaacacctctaaatattattattatgtaagttaatataacataaaatacatga 306

                                                    
Query: 601 taaatccaacagtaaataggcaatattaataatttccagat 641
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 taaatccaacagtaaataggcaatattaataatttccagat 265


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)