NNNNNGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGCTAT
TTGATTTTCTGGAGTCTACCTTCTTGAGTTCTTTATATATATTGGATATT
AGTCCCCTATCTGATTTGGGATAGGTAAAGATACTTTCCCAATCTGTTGG
TGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCA
ATTTTATGAGGTCCCATTTATCGATTCTCGATCTTACAGCACAAGCCATT
GCTGTTCTATTCAGGAATATCCCGCCTGTACCCATATCTTCAAGGCTTTT
CCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTT
CCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCA
ATTCGCAATCTTCTACATGATAACAGCCAGTTGTGCCAGCACCATTTGTT
GAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGA
TCAAGTGACCATAGGTGTGTGGGTTCATCTCTAGGTCTTCAATTCTGTTC
CATTGGTCTACTTGTCTGTCACTATACCAGTACCATGTAGTTTTTATCAC
AATTGCTCTGTAGTACAGCTTTAGGTCGGGCATGGTAATTCCACCAGAGG
TTCTTTTATCCTTAAGAAGAGTTTTTGCTATCCTAGGTTTTTTGGTATTC
CAGATGAATCTGCCTAT

NNNNCCCTATGATANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGATCCATAAGAGGTTTT
TCAACCTCTCATCTGTATTTTTCTATAGGGCATTTAAATACAAAATAATG
CCAAAAGAAAACTTATACAGTATTAATACAAGCCCATAATAACAGCATTA
ATTTAGAGGTGAGTATATGTCTTTCTATATTATCCTTGAAATTCTTTGTA
AATATGAAATTGTTCTGAAATAAAACATATTTTCAAAACATCCATTTACT
GTTTTATTCAGCATTTTAAATGTTCTCTTTGTTGCACACACTCTGCCATA
CAAAGAAGAACAAAAGATATGAATTCTACCCATGAAGTATACTAGACAAA
TTTAATTATTGAGTATGGTGGTAATTAGGAGGAAGATGAAGTCACTTATA
GCTGAGGGTTACAGAAGAATGATGGAGAAGACACAGTTGTATCTCCCTCA
TAATAGATAGCCACCCTTTTCTTATATCTATAAAAATATGAGTAAATGTT
GCTTACTTCAAAATTTTGCTAATTCCTAAACTATCACTCCTTAGAAGCAA
TAAAAACCATAAGAGAATAAACATAACAAACTCAGCATAGAACGGTACGT
GAGTAGCCAATGTTGAGTGTCCTCATCCGAGTGCCTAGCACTTGAGACAC
GACTCAGCGAACAAATGATAGAGATCCGTGGTAGGATCTGAGAGTGTTTT
GTTCCTCAGAAGTCATATACTGAGTATAT

Query= MSMg01no535_m23.g1 MSMg01no535_m23.g1 CHROMAT_FILE:
MSMg01no535_m23.g1 PHD_FILE: MSMg01no535_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:44 2005
         (578 letters)



>mm_chr17_78278101_78279076
          Length = 976

 Score = 1083 bits (560), Expect = 0.0
 Identities = 573/578 (99%), Gaps = 2/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgatccataagaggtttttcaacctctcatctgtatttttctatagggcatttaaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgatccataagaggtttttcaacctctcatctgtatttttctatagggcatttaaata 260

                                                                       
Query: 61  caaaataatgccaaaagaaaacttatacagtattaatacaagcccataataacagcatta 120
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 261 caaaataatgccaaaagaaaacttatacagtattaatacaaggtcataataacagcatta 320

                                                                       
Query: 121 atttagaggtgagtatatgtctttctatattatccttgaaattctttgtaaatatgaaat 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttagaggtgggtatatgtctttctatattatccttgaaattctttgtaaatatgaaat 380

                                                                       
Query: 181 tgttctgaaataaaacatattttcaaaacatccatttactgttttattcagcattttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttctgaaataaaacatattttcaaaacatccatttactgttttattcagcattttaaa 440

                                                                       
Query: 241 tgttctctttgttgcacacactctgccatacaaagaagaacaaaagatatgaattctacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttctctttgttgcacacactctgccatacaaagaagaacaaaagatatgaattctacc 500

                                                                       
Query: 301 catgaagtatactagacaaatttaattattgagtatggtggtaattaggaggaagatgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgaagtatactagacaaatttaattattgagtatggtggtaattaggaggaagatgaa 560

                                                                       
Query: 361 gtcacttatagctgagggttacagaagaatgatggagaagacacagttgtatctccctca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcacttatagctgagggttacagaagaatgatggagaagacacagttgtatctccctca 620

                                                                       
Query: 421 taatagatagccacccttttcttatatctataaaaatatgagtaaatgttgcttacttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatagatagccacccttttcttatatctataaaaatatgagtaaatgttgcttacttca 680

                                                                       
Query: 481 aaattttgctaattcctaaactatcactccttagaagcaataaaaaccataagagaataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaattttgctaattcctaaactatcactccttagaagcaataaaaaccataagagaataa 740

                                                 
Query: 541 acataacaaactcagcatagaacggtacgtgagtagcc 578
           |||||||||||  |||||||||||||||||||||||||
Sbjct: 741 acataacaaac--agcatagaacggtacgtgagtagcc 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 976
Length adjustment: 10
Effective length of query: 568
Effective length of database: 966
Effective search space:   548688
Effective search space used:   548688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)