Query= MSMg01no537_n12.b1 MSMg01no537_n12.b1 CHROMAT_FILE:
MSMg01no537_n12.b1 PHD_FILE: MSMg01no537_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:19 2005
(590 letters)
>mm_chr17_62565166_62566155
Length = 990
Score = 1073 bits (555), Expect = 0.0
Identities = 579/587 (98%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 5 gaattcactattttataaaataactcaccctgttattaaatataaaatgtttaattaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactattttataaaataactcaccctgttattaaatataaaatgtttaattaata 264
Query: 65 tttaattaattaaatattgaaatagctcaccgggtgtaaataacattcaattactattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaattaattaaatattgaaatagctcaccgggtgtaaataacattcaattactattaa 324
Query: 125 tttgaacattcttcatctgctctttgaattcatcctttgaaagacaaaagggagcctatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 tttgaacattcttcatctgctctttgaattcatcctttgaaagacaaaaggaagcctatt 384
Query: 185 ctctgagaacaatgttaggccttcagttgtctaaaaaattaaagataaaatcatctgttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctgagaacaatgttaggccttcagttgtctaaaaaattaaagataaaatcatctgttc 444
Query: 245 ctaaaactctctacaatctgtggactctgctttcattatttcctgtcatgtgaccaccct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 445 ctaaaactctctacaatctgtggactctgctttcattatttcctgtcatgtgacctccct 504
Query: 305 tcttagtcttacaacgtcaaatatcctactaactagaagaattgttttaagctagttcca 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcttagtcttacaatgtcaaatatcctactaactagaagaattgttttaagctagttcca 564
Query: 365 agaactgaccattcatccaaaatattatccaatcaatacttctttcagtaggaattactt 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 565 agaactgaccattcatccaaaatattatccaatcaatacatctttcagtaggaattactt 624
Query: 425 tcataaccaagatgtcatatttatttgtgtttctttttaa-tttctgacttaacttttct 483
||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 625 tcataaccaagatgtgatatttatttgtgttt-tttttaaatttctgacttaacttttct 683
Query: 484 tcatgtgtctcacaagaaacatgcgttaggatcactttatggtcatctttgtttgtatat 543
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcatgtgtctcataagaaacatgcgttaggatcactttatggtcatctttgtttgtatat 743
Query: 544 tctcaatatcacctaattttcattatgcattgcaaattccatctagc 590
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tctcaatatcacctaattttcattatgcattgcaaattccatctagc 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_n12.g1 MSMg01no537_n12.g1 CHROMAT_FILE:
MSMg01no537_n12.g1 PHD_FILE: MSMg01no537_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:19 2005
(470 letters)
>mm_chr17_62742338_62743210
Length = 873
Score = 592 bits (306), Expect = e-173
Identities = 330/340 (97%), Gaps = 5/340 (1%)
Strand = Plus / Minus
Query: 135 tccttggtgtgattgatgccccagtgtagggggatgcgagagcagtggggccggactgga 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tccttggtgtgattgatgccccagtgtagggggatgcgagagcagtggggccggactgga 814
Query: 195 gtgggtggttgggtgggtgagggagcaccctcacagaggcaaaggggaggtgggagatgt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gtgggtggttgggtgggtgagggagcaccctcacagaggcaaaggggaggtgggagatgt 754
Query: 255 aggactgggggttgtggaggggtaactgggaagggggatagcatttgagatgtaaacgaa 314
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 753 gggactgggggttggggaggggcaactgggaagggggatagcatttgagatgtaaacgaa 694
Query: 315 tgggatgattgacagacaaactttctccttgctttttgcagcccctttcaaatgtgaagt 374
|||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 693 tgggatgattgacagacaaactttcttcttgctttttacagcccctt-caaatgtgaagt 635
Query: 375 aatgggattctctct----gctgtggagtttgcggctctctgctggttcatagccctggt 430
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aatgggattctctctctctgctgtggagtttgcggctctctgctggttcatagccctggt 575
Query: 431 aactaaacccagctccttgcatgccaggcaggcgctgtac 470
||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aactaaacccagctccttgcatgccaggcaggcgctgtac 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 873
Length adjustment: 10
Effective length of query: 460
Effective length of database: 863
Effective search space: 396980
Effective search space used: 396980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
