NGGGGGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTCTGTTCTAGATGGAATACTTCGGTCTCATCCTCAT
AAAGAGCCACAGCAGAATCAGTCTTCTCTTGGGGTTCTCAATGTGTAGAG
CTTTCCCCTGGTAACTAGCTACTTTTATTATTCAGAGAATTTGGGCTTAA
TATACATAATTCATAGGGGTACCTATTGTAACACCTATTTAACAAAACCT
TAGTAATGAGAGGCTAACTAATTATGGTAAACTAATGCTTACTCTAATAT
TGATAACTGTTAGATCTAATTCTTTTGTCTTGGGCACTCTTTTATTCTTT
TGAGTCATCACAGTCAAAACAAAAGCAAAACCAAAAAAAGAAAAAAAATA
TGAAAGGGAAACCCAATAAAACATTATTAGTGTTAGCCCTGAGATTCACC
AGAGACAAACCAATTCCACCATTTTGGGCCAAATTTGAAGCAAGCTTTAT
TAAATATTAAATAACCGACCCAGAGATGGACTTTGGTCAGGACCATTCCC
TGGAATTTCCCAGCTGAATGGCCGACAGACACAAGTTACAGGGGTTATAG
GCTACCTACTTTCCCATGAGGCTTCATTATTGTTTAAGAACTACAACTCC
CAGCATTCCAGGAAGTTAACCTGGTCCTTGGGCAGGTTGGGCTTATAGGT
TAACTTTTGAGCTTTACAATAATAACAAATAATAAGGAACTAA

TTTTATGCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGCTCAAGGAACAAT
AATACTGGCTATGCTTTTCAAACTAGGGAAAGAAAGTCAGTCTTTCTTGT
GATCTCTATTACATATAAGTTAATTTCATAAAATGTGTGATTTAATGGGT
TGATTTTCACCTCCAAGTTTCAAGAGTTAAAACTTCAGAGGTCTTTATAT
CTGTGTATAACATCTATTGGCTATCAGAGTTGGGTGTAATCAGTGTCTTC
TTACCTAATTAGTCCAATAAAAATGGTAAAATCAATTTATAAATTGTTTG
ATAGTTCAAATCCCTTTGAACTTTCATATGATTAATTAAAAAAAAATCTT
AATGTTACGGGGCTGTTTGGAAGAAGAAATAACTTGTGTTTCAATACTAA
AACATTAAGACTTGAGAGGCACTAGGTAACCGAGCACTTGGGAAGGGGAA
GTAGGAAAAACAGGATTTCACAATCACCCCTCAGGTTGACCTTTTTCAAA
AAACAATAATAAAAAATAAAAAAAATAAACCTACAGGAATGAGGAGACAG
CTCACTGGGTAGGTAGTGCTGCCTTTGCCACCAAGCCTGGCTTCCTGAGT
TATTCCCTGAATTCCATGGGAGAGCCAACTCCCAGAAGTTGTTCTTTGAC
AACTACACATGACGTATGTGTCCA

Query= MSMg01no539_j14.g1 MSMg01no539_j14.g1 CHROMAT_FILE:
MSMg01no539_j14.g1 PHD_FILE: MSMg01no539_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:37 2005
         (641 letters)



>mm_chr17_85377342_85378382
          Length = 1041

 Score = 1216 bits (629), Expect = 0.0
 Identities = 638/641 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagctcaaggaacaataatactggctatgcttttcaaactagggaaagaaagtcagtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 acagctcaaggaacaataatactggctatgcttttcaaactagggaaagaaagtcagtca 260

                                                                       
Query: 61  ttcttgtgatctctattacatataagttaatttcataaaatgtgtgatttaatgggttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttgtgatctctattacatataagttaatttcataaaatgtgtgatttaatgggttga 320

                                                                       
Query: 121 ttttcacctccaagtttcaagagttaaaacttcagaggtctttatatctgtgtataacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcacctccaagtttcaagagttaaaacttcagaggtctttatatctgtgtataacat 380

                                                                       
Query: 181 ctattggctatcagagttgggtgtaatcagtgtcttcttacctaattagtccaataaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctattggctatcagagttgggtgtaatcagtgtcttcttacctaattagtccaataaaaa 440

                                                                       
Query: 241 tggtaaaatcaatttataaattgtttgatagttcaaatccctttgaactttcatatgatt 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tggtaaaatcaatttataaattgtttgatagttcaaatccccttgaactttcatatgatt 500

                                                                       
Query: 301 aattaaaaaaaaatcttaatgttacggggctgtttggaagaagaaataacttgtgtttca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattaaaaaaaaatcttaatgttacggggctgtttggaagaagaaataacttgtgtttca 560

                                                                       
Query: 361 atactaaaacattaagacttgagaggcactaggtaaccgagcacttgggaaggggaagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atactaaaacattaagacttgagaggcactaggtaaccgagcacttgggaaggggaagta 620

                                                                       
Query: 421 ggaaaaacaggatttcacaatcacccctcaggttgacctttttcaaaaaacaataataaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaaaacaggatttcacaatcacccctcaggttgacctttttcaaaaaacaataataaa 680

                                                                       
Query: 481 aaataaaaaaaataaacctacaggaatgaggagacagctcactgggtaggtagtgctgcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaataaaaaaaataaacctacaggaatgaggagacagctcactgggtaggtagtgctgcc 740

                                                                       
Query: 541 tttgccaccaagcctggcttcctgagttattccctgaattccatgggagagccaactccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgccaccaagcctggcttcctgagttattccctgaattccatgggagagccaactccc 800

                                                    
Query: 601 agaagttgttctttgacaactacacatgacgtatgtgtcca 641
           |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 801 agaagttgttctttgacaactacacatgacatatgtgtcca 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)