Query= MSMg01no541_j22.b1 MSMg01no541_j22.b1 CHROMAT_FILE:
MSMg01no541_j22.b1 PHD_FILE: MSMg01no541_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:20 2005
(604 letters)
>mm_chr17_9317065_9318068
Length = 1004
Score = 1152 bits (596), Expect = 0.0
Identities = 599/600 (99%)
Strand = Plus / Plus
Query: 5 gaattcacactgtatctactaagtttaaatcacattataatagtgcaacagtaatattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacactgtatctactaagtttaaatcacattataatagtgcaacagtaatattaa 264
Query: 65 agtctgggcatgatttcaagttacatagccatgccaataagacactaagataagccatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtctgggcatgatttcaagttacatagccatgccaataagacactaagataagccatat 324
Query: 125 tctctaattgtaccttgattggggagtttaagctctgaggttgttatttctttttgactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctctaattgtaccttgattggggagtttaagctctgaggttgttatttctttttgactt 384
Query: 185 cagaatacttgggagtagctggcacattctatggttttagaaaattgtgctaaaacatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagaatacttgggagtagctggcacattctatggttttagaaaattgtgctaaaacatgc 444
Query: 245 ttatccccaaggtttgtctaatttttaagtatatagttgaatagtgcttggtacattcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatccccaaggtttgtctaatttttaagtatatagttgaatagtgcttggtacattcac 504
Query: 305 attgtgacagagcaaatctcagaagtctttcatcaattaaaagcccatgagtcacagttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgtgacagagcaaatctcagaagtctttcatcaattaaaagcccatgagtcacagttt 564
Query: 365 tatgttcttaccatccccatcgtggtgaaaggctgtaatgattccttctcactaggcttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatgttcttaccatccccatcgtggtgaaaggctgtaatgattccttctcactaggcttc 624
Query: 425 tgtcccagttgaatgttgattttctcagtgtctgccctgcattctggtgatgaggtcatt 484
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 tgtcccagttgaatgttgattttctcaatgtctgccctgcattctggtgatgaggtcatt 684
Query: 485 cttcctcccaggtgtctcaagtcacatggccaatcccaggatcacatccaaggaaacatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttcctcccaggtgtctcaagtcacatggccaatcccaggatcacatccaaggaaacatg 744
Query: 545 ttatcaaagttacatagtgtaacagtgggtctcccacaagaggagtccagaaatcagcca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatcaaagttacatagtgtaacagtgggtctcccacaagaggagtccagaaatcagcca 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_j22.g1 MSMg01no541_j22.g1 CHROMAT_FILE:
MSMg01no541_j22.g1 PHD_FILE: MSMg01no541_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:20 2005
(526 letters)
>mm_chr17_9426108_9427031
Length = 924
Score = 959 bits (496), Expect = 0.0
Identities = 518/526 (98%), Gaps = 2/526 (0%)
Strand = Plus / Minus
Query: 1 cccagggcaacactggatcaatccagtctcttgcatattacacttccagaagtatcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 cccagggcaacactggatcaatccagtctcttgcatattacacttccagaagtatcttgg 770
Query: 61 ttattcttggccctacatccttccacataactttgaaatatgagccaaggaattaaaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 769 ttattcttggccctacatccttccacataactttgaaatatgagccaaggaatt--aaaa 712
Query: 121 aaaaaaagaacatggcaggtggctggtaccttcttaaatgagacattgcagatgataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aaaaaaagaacatggcaggtggctggtaccttcttaaatgagacattgcagatgataata 652
Query: 181 gatcaggcatctcttcaatatttccacacataaatagaatagtaaaatcaaattgtattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gatcaggcatctcttcaatatttccacacataaatagaatagtaaaatcaaattgtattc 592
Query: 241 aattttggaattaatatgttgaatttgagtctcttgccacttgctcctactaagtctttc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 591 aattttggaattaatatgttgaatttgagtctcttgccacttgctcttactaagtctttc 532
Query: 301 ttgagtttttcagaattttaaaaatgtctccactgaccaaatgttttgtacactatttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgagtttttcagaattttaaaaatgtctccactgaccaaatgttttgtacactatttat 472
Query: 361 ttgcttattaactattcaaatatacacacaaaattcagtcctagtttctaagcttaacaa 420
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 471 ttgcttattaactattcaaatatacacataaaattcaatcctagtttctaagcttaacaa 412
Query: 421 ctgtggttaatccaagtctctgatacttttcatctctaacttagatagtgcatcctgtgc 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctgtagttaatccaagtctctgatacttttcatctctaacttagatagtgcatcctgtgc 352
Query: 481 ttgtattaactaggcaacacatggtggttagctagtcatgctcttg 526
||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 351 ttgtattaactaggcaacatatgatggttagctagtcatgctcttg 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 924
Length adjustment: 10
Effective length of query: 516
Effective length of database: 914
Effective search space: 471624
Effective search space used: 471624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
