ACAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTAAATAGAGCTGGAATAAAGCTGGAGGCAGAAGCTGATGCAGAGGCC
ATGAAGGGGTTTTGCTTACTGGCTTGCTCTTCATGGCTTCCTCAGCCTGA
TTGCTTATACAATCCAGGACCACCAGCCCAGGGGTGGCATCACAAATAAC
AGTCTAGGCTCTTACACACCAATCACTAGTTAAGAAAATGTCCTACAGAC
TTGCCCACAGCCTGATCATATGGAGGCAGTCCCTCAATTGATGGCCCCTC
CTCTCCATGTCTCTAACTTGTGCTGGCATAAAACTGCCCAGAACACTCAG
CAACCGAGAGACCTCACATACAAATTGAAGCCCGAGTCCAAAGCCTGTCA
TGTGCACACCGCTCCAGATATACATTCAGTGCCTGACTTCATTAAAAGCC
AGTCTTGTTGCATTTAAATCTGACTTGGAATTTTGTCTGGAAGGTCTGAG
AAGTGTCTGTGGAATGCTTGGACTCCATCTGACTTTCCCTCAGGTCCCTT
GGAACAGTGGTTGGATAAACTGGCCTCTCAGATCATCCTGACTACATGTC
CTCTCCCTCACTTACGTTACCCCTTTCTCTGGTCTTCTTTCATTCCCAGA
TACATTCTAAGCTCTTTCCCATCAGGTTTCAGGATTAGGTTTCCCAAGCT
GGCACTGAATCTGACGTTTACCAGCTTTTCAATTAATGTTGCATGCATGC
ATGAATG

ACCATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCTTTGTCAGCATCTTTTAGAGTTGTC
CCAAAAAGGGTTTTTAATGCTCCAGCTGTCTACTTCTGGGCGGTGACTGT
ATAAAGTGCACAACCATCAGTAAACCAGGCCCTAGCTGTCTCCTCCTCAG
TACGCTGATTGTAGGGAACACCCCATGAAACTATAGGTGTATGCTTGGCA
GTAAGACTGCACTGTAACAAGAGCAGAAATCATAGGCATTTGGGCAACTT
CTTCATGTGACTCACTTGTGCCATCAGGACCTGGTCAGGTTCAATCATGC
ATATACCACTTCCATTTTAAAAAAGATTTATTTGTTTTGTGTATACGAGT
ATACTATAGCTGTCTTCAGACACATCAGAAATGGGCATCAGATCCCATTG
CAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATTGAACTTAGGACCT
CTGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCTTTCTCTCCAGCTCTA
TACCACTTCCATTTGATAATGGATTGCTGCTGTGCATGTCCTACTTTATG
ATTTGGTGGTCCAATAATACTTAGCTCATGATGGGCAGCTCTGGTCGCAT
GGTAACTTGCTGGCTCATTGTCAAATGTTCAGTTTCCACTGANGCCCAAT
AGCAGGCCAAGAGCTGTCTTTAAAGGGAGAATAGTTGTCTGCAGATGACG
GTAG

Query= MSMg01no542_o10.b1 MSMg01no542_o10.b1 CHROMAT_FILE:
MSMg01no542_o10.b1 PHD_FILE: MSMg01no542_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:04 2005
         (629 letters)



>mm_chr17_45440381_45441409
          Length = 1029

 Score = 1205 bits (623), Expect = 0.0
 Identities = 626/627 (99%), Gaps = 1/627 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaatt-aaatagagctggaataaagctggaggcagaagctgatgcagaggccatgaagg 62
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcaaatagagctggaataaagctggaggcagaagctgatgcagaggccatgaagg 262

                                                                       
Query: 63  ggttttgcttactggcttgctcttcatggcttcctcagcctgattgcttatacaatccag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggttttgcttactggcttgctcttcatggcttcctcagcctgattgcttatacaatccag 322

                                                                       
Query: 123 gaccaccagcccaggggtggcatcacaaataacagtctaggctcttacacaccaatcact 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaccaccagcccaggggtggcatcacaaataacagtctaggctcttacacaccaatcact 382

                                                                       
Query: 183 agttaagaaaatgtcctacagacttgcccacagcctgatcatatggaggcagtccctcaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agttaagaaaatgtcctacagacttgcccacagcctgatcatatggaggcagtccctcaa 442

                                                                       
Query: 243 ttgatggcccctcctctccatgtctctaacttgtgctggcataaaactgcccagaacact 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgatggcccctcctctccatgtctctaacttgtgctggcataaaactgcccagaacact 502

                                                                       
Query: 303 cagcaaccgagagacctcacatacaaattgaagcccgagtccaaagcctgtcatgtgcac 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cagcaaccgagagacctcacatacaaattgaagcccgagtccaaagcctgtcatgtgcac 562

                                                                       
Query: 363 accgctccagatatacattcagtgcctgacttcattaaaagccagtcttgttgcatttaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 accgctccagatatacattcagtgcctgacttcattaaaagccagtcttgttgcatttaa 622

                                                                       
Query: 423 atctgacttggaattttgtctggaaggtctgagaagtgtctgtggaatgcttggactcca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atctgacttggaattttgtctggaaggtctgagaagtgtctgtggaatgcttggactcca 682

                                                                       
Query: 483 tctgactttccctcaggtcccttggaacagtggttggataaactggcctctcagatcatc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tctgactttccctcaggtcccttggaacagtggttggataaactggcctctcagatcatc 742

                                                                       
Query: 543 ctgactacatgtcctctccctcacttacgttacccctttctctggtcttctttcattccc 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctgactacatgtcctctccctcacttacgttacccctttctctggtcttctttcattccc 802

                                      
Query: 603 agatacattctaagctctttcccatca 629
           |||||||||||||||||||||||||||
Sbjct: 803 agatacattctaagctctttcccatca 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)