Query= MSMg01no547_c07.b1 MSMg01no547_c07.b1 CHROMAT_FILE:
MSMg01no547_c07.b1 PHD_FILE: MSMg01no547_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:41 2005
(672 letters)
>mm_chr17_9604304_9605375
Length = 1072
Score = 1263 bits (653), Expect = 0.0
Identities = 665/669 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttatcaggagtacgtaagctgaacctgtaatcttaccaaggctacctgacact 63
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttatcaggagaaggtaagctgaacctgtaatcttaccaaggctacctgacact 263
Query: 64 ctgcagggagaggatatggggttctggctccccagatcagaccaagaagaggaaacctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgcagggagaggatatggggttctggctccccagatcagaccaagaagaggaaacctgc 323
Query: 124 catcttgcaccaagcttaagagagctgtctggacacagaaggcttgaccttcagcaggag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catcttgcaccaagcttaagagagctgtctggacacagaaggcttgaccttcagcaggag 383
Query: 184 ggtccaacagtattaagctctagaattttctctgtctttttccttttatcgtgaatctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtccaacagtattaagctctagaattttctctgtctttttccttttatcgtgaatctgc 443
Query: 244 tttagtcaatcatctatctgagaatccagattttacataataactgacaatgtttggaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttagtcaatcatctatctgagaatccagattttacataataactgacaatgtttggaaa 503
Query: 304 tccattgttagatactatctccagtatcatcgccagtataaaccttctcctcatatcttc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 504 tccattgttagatactatctccagtatcatcgccagtataaaccttctcctcgtatcttc 563
Query: 364 ctgtccttatgaactattctgcctgtacatttctaacccaccacttcacttcttatgcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgtccttatgaactattctgcctgtacatttctaacccaccacttcacttcttatgcat 623
Query: 424 tagtatagatgattatataaaaccaggagaatggaactttttaggtcattggtcttatgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagtatagatgattatataaaaccaggagaatggaactttttaggtcattggtcttatgg 683
Query: 484 caaatccagacggcggtagagccccagagaggcctactggccttagccatgtgctttgta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 caaatccagacggcggtagagccccagagaggcctactggccttagccatgtgctttgta 743
Query: 544 aaccatttcacttgacaaggtggtcctgtgaactgcgctcctacagaaggcaacagagat 603
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 744 aaccatttcacttgacaaggtggtcctgtgagctgcgctcctacagaaggcaacagagat 803
Query: 604 tctccatggcctcatccctcttcagtacacagggtaggagattaaaatatgagaagtgac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tctccatggcctcatccctcttcagtacacagggtaggagattaaaatatgagaagtgac 863
Query: 664 ttggagaaa 672
|||||||||
Sbjct: 864 ttggagaaa 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_c07.g1 MSMg01no547_c07.g1 CHROMAT_FILE:
MSMg01no547_c07.g1 PHD_FILE: MSMg01no547_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:41 2005
(636 letters)
>mm_chr17_9748024_9749059
Length = 1036
Score = 1205 bits (623), Expect = 0.0
Identities = 629/631 (99%)
Strand = Plus / Minus
Query: 6 attcaatgggctgtggttcaggaatctccctccccaactttatagaacacatacgtatca 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 attcaatgggctgtggttaaggaatctccctccccaactttatagaacacatacgtatca 720
Query: 66 tatgagaagcagctgattggctggtgttgttgtttgcctatattgtcatataggtgttgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tatgagaagcagctgattggctggtgttgttgtttgcctatattgtcatataggtgttgt 660
Query: 126 tagcctctgattggctgaaagttctgcttcttggatttgttaaggcccattactcactac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tagcctctgattggctgaaagttctgcttcttggatttgttaaggcccattactcactac 600
Query: 186 aagaagaagctttcaggtggcatttgctctcacacaggctacttcattctctattataga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aagaagaagctttcaggtggcatttgctctcacacaggctacttcattctctattataga 540
Query: 246 aatacctctagttgtaactagttgctcaaatgtagaggctggctctgggcaaattggttt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aatacctctagttgtaactagttgctcaaatgtagaggctggctctgggcaaattggttt 480
Query: 306 tattcaacagtttaatggaagacaaatacatctaaagaaaaagataaaggtgatcattct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tattcaacagtttaatggaagacaaatacatctaaagaaaaagataaaggtgatcattct 420
Query: 366 caccttatttaagataatttttgtaggctgaaaaggtggcttgatgggtaaagcgattgc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caccttatttaagataatttttgtaggctgaaaaggtggcttgatgggtaaagcgattgc 360
Query: 426 ttaacaatcgagcctcagaacacatgcttatggcatccccagggcatctctgctgagatg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttaacaatcgagcctcagaacacatgcttatggcatccccagggcatctctgctgagatg 300
Query: 486 gtaattaggcaggagaatccttcaaagctctagggacagctggccttgcatccacaattt 545
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtaattagacaggagaatccttcaaagctctagggacagctggccttgcatccacaattt 240
Query: 546 tgaagtattgaagagacctgttgcaatcaaatttgaaggcaaagacaaacacccaaggtt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgaagtattgaagagacctgttgcaatcaaatttgaaggcaaagacaaacacccaaggtt 180
Query: 606 gtcctctgacctccatatatgcactgtggaa 636
|||||||||||||||||||||||||||||||
Sbjct: 179 gtcctctgacctccatatatgcactgtggaa 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
