BAC Information

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BAC

Clone NameB6Ng01-003L05
Chromosome18 (Build37)
Map Location 8,469,049 - 8,470,130
singlet/doubletsinglet
Overlap genenone
Upstream geneMpp7, EG622384, LOC100039562, LOC100039606, Wac, LOC665121, LOC225134, LOC665132, EG433158
Downstream geneEG545242, LOC665161, Fzd8, 9430022F06Rik, Ccny
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003L05.bB6Ng01-003L05.g
ACCDH841329DH841330
length1,076919
definitionDH841329|Mus musculus domesticus DNA, BAC clone: B6Ng01-003L05, 5' end.DH841330|Mus musculus domesticus DNA, BAC clone: B6Ng01-003L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacccttcaaaagtataagaaaatggagtctcattctttatta
actacttggtcttggttattttttatagcatataaagagtatataaagat
gaatatagaatttatccttattaatgtgttctaccccacccagttttctc
tagatggttgcagagtaagctacaggcaagtcctcaacagctctccttca
gctttccactgttggctttgtttagtgaggaactctacctacttacagat
aactgattattctcatcaacaaatctttggaattatttccactgtcgttt
tctgaatactctaaattttctttagtaaatttatttgtaaccagaaacaa
atgttaccaataaaataaaaaattcttaagcttctaaacttatgtcagtt
ttgtgagattcacaggaaactccacttccccaaattccaaaaggcagaaa
ggtcaaatggctgtacataatgcctattatcataccaaaatacgtgctag
cctcgaggcttcctgaatatcacaagtaccaatgaaaaggttagctcagg
aactttgaaaggttttgaactttgaaacactctccccgactccagaaggg
agaggctaattagcttttctcacatcacaagacatattcctcaggactga
ccattgctcatcttccgacaagggaagtccttgtcacctcattccctaaa
gaccaatcagtttaaagggtgcactgttcctccaatcatattgtgcctag
ttgctgatgctctgttctgcccctggaaaccatataaaaacttggttgaa
ctggtgctgggggtcactgcctcttcttcgggtctgggacaaccccagtt
cactggaacaaaaaattcctcttgctttttgcatcaatcctggctccacg
tggttcactcagggggttcccgggtaagctgaggctgccagagtcttaca
cctgctacatattccaagtctagtctagcatctaactattttccttcctt
ccttacataactcttcagctcaccaactttctctcccccaagctactaat
tttctaaacttctggctatttcactg

gaattccttgcagcccacattcagcaggaagaagtttcagagagctgtca
tcctgatcccttgggtttgggtgtcttgttatggttcttttataaattat
agctagataatagccagaagctggaaagaacccagatgcccctcaacaga
ggaatggatacagaaaatgtggtacatctacacaatggagtactactcag
ctattaaaaagaatgaatttatgaaattcctagccaaatggatggacccg
gagggcatcaatctgagtgaggtaacacattcacaaaggaactcacacaa
tatgtactcactgataagtggatattagccccaaacctaggatacccaag
atataaaatacaatttgctaaacacatgaaactcaagaagaatgaagact
gaagtgtggacactatgcccctccttagaattgggaacaaaacacccatg
gaaggagttacagagacaaagtttggagctgagatgaaagggtggaccat
gtagagactgccatatccagggatccaccccataatcagcatccaaacgc
tgacaccattgcatatactagcaagattttatcgaaaggacccagatgta
gctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatg
ctcacagttagctaatggatggatcacagggctcccaatggaggagctag
agaaagtagccaaggagctaaagggatctgcaaccctataggtggaacaa
cattatgaactaaccagtaccccggagctcttgactctagctgcatatgt
atcaaaagatggcctagtcggccatcactggaaagagaggcccattggac
acgcaaactttatatgccccagtacaggggaacgccagggccaaaaaggg
gagtgggtggggtaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_8469049_8470130
seq2: B6Ng01-003L05.b_44_1119 (reverse)

seq1  CAGTGAAATAG-CAGAAGTTATAAGGAAAATAAGTAGCTTGGGGGGAGGA  49
      ||||||||||| |||||||| ||  |||||| |||||||||||||   ||
seq2  CAGTGAAATAGCCAGAAGTT-TA--GAAAATTAGTAGCTTGGGGGAGAGA  47

seq1  AAGTTGGTGAGCTGGAAAGAGTTTATGTAAGGAAGGAAGGAAGAATAGTT  99
      ||||||||||||||  ||||| |||||||||||||||||||| |||||||
seq2  AAGTTGGTGAGCTG--AAGAG-TTATGTAAGGAAGGAAGGAA-AATAGTT  93

seq1  AGATGCTAGACTAGACTTTGAAATATGTAGCAGGTGTAAGACTCTGGCAG  149
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  AGATGCTAGACTAGAC-TTGGAATATGTAGCAGGTGTAAGACTCTGGCAG  142

seq1  CCTCAGCTTACCGGGGAACCCCCTGAGTGAACCACGTGGAGCCAGGATTG  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTTACCCGGGAACCCCCTGAGTGAACCACGTGGAGCCAGGATTG  192

seq1  ATGCAAAAAGCAAGAGGAATTTTTTGTTCCAGTGAACTGGGGTTGTCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAAAGCAAGAGGAATTTTTTGTTCCAGTGAACTGGGGTTGTCCCA  242

seq1  GACCCGAAGAAGAGGCAGTGACCCCCAGCACCAGTTC-ACCAAGTTTTTA  298
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GACCCGAAGAAGAGGCAGTGACCCCCAGCACCAGTTCAACCAAGTTTTTA  292

seq1  TATGGTTTCCAGGGGCAGAACAGAGCATCAGCAACTAGGCACAATATGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTCCAGGGGCAGAACAGAGCATCAGCAACTAGGCACAATATGAT  342

seq1  TGGAGGAACAGTGCACCCTTTAAACTGATTGGTCTTTAGGGAATGAGGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAACAGTGCACCCTTTAAACTGATTGGTCTTTAGGGAATGAGGTG  392

seq1  ACAAGGACTTCCCTTGTCGGAAGATGAGCAATGGTCAGTCCTGAGGAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACTTCCCTTGTCGGAAGATGAGCAATGGTCAGTCCTGAGGAATA  442

seq1  TGTCTTGTGATGTGAGAAAAGCTAATTAGCCTCTCCCTTCTGGAGTCGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGTGATGTGAGAAAAGCTAATTAGCCTCTCCCTTCTGGAGTCGGG  492

seq1  GAGAGTGTTTCAAAGTTCAAAACCTTTCAAAGTTCCTGAGCTAACCTTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGTTTCAAAGTTCAAAACCTTTCAAAGTTCCTGAGCTAACCTTTT  542

seq1  CATTGGTACTTGTGATATTCAGGAAGCCTCGAGGCTAGCACGTATTTTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTACTTGTGATATTCAGGAAGCCTCGAGGCTAGCACGTATTTTGG  592

seq1  TATGATAATAGGCATTATGTACAGCCATTTGACCTTTCTGCCTTTTGGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAATAGGCATTATGTACAGCCATTTGACCTTTCTGCCTTTTGGAA  642

seq1  TTTGGGGAAGTGGAGTTTCCTGTGAATCTCACAAAACTGACATAAGTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAAGTGGAGTTTCCTGTGAATCTCACAAAACTGACATAAGTTTA  692

seq1  GAAGCTTAAGAATTTTTTATTTTATTGGTAACATTTGTTTCTGGTTACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTAAGAATTTTTTATTTTATTGGTAACATTTGTTTCTGGTTACAA  742

seq1  ATAAATTTACTAAAGAAAATTTAGAGTATTCAGAAAACGACAGTGGAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTACTAAAGAAAATTTAGAGTATTCAGAAAACGACAGTGGAAAT  792

seq1  AATTCCAAAGATTTGTTGATGAGAATAATCAGTTATCTGTAAGTAGGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAAGATTTGTTGATGAGAATAATCAGTTATCTGTAAGTAGGTAG  842

seq1  AGTTCCTCACTAAACAAAGCCAACAGTGGAAAGCTGAAGGAGAGCTGTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTCACTAAACAAAGCCAACAGTGGAAAGCTGAAGGAGAGCTGTTG  892

seq1  AGGACTTGCCTGTAGCTTACTCTGCAACCATCTAGAGAAAACTGGGTGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTGCCTGTAGCTTACTCTGCAACCATCTAGAGAAAACTGGGTGGG  942

seq1  GTAGAACACATTAATAAGGATAAATTCTATATTCATCTTTATATACTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACACATTAATAAGGATAAATTCTATATTCATCTTTATATACTCTT  992

seq1  TATATGCTATAAAAAATAACCAAGACCAAGTAGTTAATAAAGAATGAGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCTATAAAAAATAACCAAGACCAAGTAGTTAATAAAGAATGAGAC  1042

seq1  TCCATTTTCTTATACTTTTGAAGGGTGAGAATTC  1082
      ||||||||||||||||||||||||||||||||||
seq2  TCCATTTTCTTATACTTTTGAAGGGTGAGAATTC  1076


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