BAC Information

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BAC

Clone NameB6Ng01-003N04
Chromosome18 (Build37)
Map Location 69,337,279 - 69,338,432
singlet/doubletsinglet
Overlap genenone
Upstream geneD18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
Downstream geneLOC100043380, EG225681, Tcf4, Ccdc68, Rab27b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003N04.bB6Ng01-003N04.g
ACCDH841415DH841416
length1,1421,139
definitionDH841415|Mus musculus domesticus DNA, BAC clone: B6Ng01-003N04, 5' end.DH841416|Mus musculus domesticus DNA, BAC clone: B6Ng01-003N04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccatcgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgctgtttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttcttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagatggtgttgttcccttatttctttctcagcctgttt
attctttgtggtagagaaaggcattgactgtttgagttaatttaatatca
agctaccttcccaaagctggtttatcagtttaggagtctctgtggaattt
tacggtcacttaatatacctactaatccttggcaaaatggaa
gaattctattattgctaaaatatcataatcattggcacaaagttcctaat
acattccttccatgggggcatcccattttcaattccagattctgatgtat
tctaccccgtatgtacgctgtcacattctgttaattgtttgttattctta
ttgatgtctataattccaaagccttggaattatctactttctttctactt
tactcatttctgttcttagttttactatttaatttcatttttagtttcat
ttactctatttttcatttccttcaggtgggaaattaggtaactgacaaga
ttctgcatcttaaatgcttagcacaagtacttaaattagcaaatttcccc
ctagataccatttaaacggcttcctataaattcaacatgttgtattttca
ttttctttccatgcaaaaaaaccagtttttgtctctttttaaagatttta
ttgaacatatggactattaaaattatataattttcattttcagaatttca
aggattagcctgggcttctggcacacacatactctctgtgttcagaaggt
tgaaccaggaggcgaatcgtgagtttgaagtcagcttgcaccacataatt
agtccctgtacccctctgctccccacaagacaaattcagtggtgatttta
aatctctttttgttgtttctcattgatctgattatttcaatgtgagttgg
ctttcctcttctgctatttttttttaatctgtagcttcctggagttattg
gtttctctctcattaaaaaattattctctctctttcccactccatctgtc
tcccctgtgtggatactaatatatattttaaaggcaggttaagattaacc
tgtattgtaggggtttttataaatcatattgtttataaatcataatcttg
gttatatactgaagtttgtattgaattatctgattccactttaagtattt
atttttactatgtgtatgtggtgtgcatgtgcatatgtacgtgtgctggt
gtctgtatgcgcccagtgcccaggacactaagaaaggtgtatcagttcct
tcaaacgaacttatgggcaattatgagctgctgactggggtgctgaacca
acttgatcttctgctaagaacaggtgctctcctgccgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69337279_69338432
seq2: B6Ng01-003N04.g_70_1208 (reverse)

seq1  CTCGGCAGCGAAGAGCACCTGCTGCTTTAGCAGAAGAACCAGGTTTGGGT  50
      |||||||  | |||||||||| |   ||||||||||| | ||  ||||  
seq2  CTCGGCA--GGAGAGCACCTGTT--CTTAGCAGAAGATCAAG--TTGG--  42

seq1  TCCAGCACCCAGGTCAGGCAGCTCATAATTGCCCATAAGTTCGGTTTGAG  100
      | ||||||||  |||| |||||||||||||||||||||||||| ||  ||
seq2  TTCAGCACCCCAGTCA-GCAGCTCATAATTGCCCATAAGTTCGTTTGAAG  91

seq1  GAAACCTGATACCACTTTC-TAGTGTCCTTGTGCAACTGTGCGCATACAG  149
      |||  |||||||  ||||| |||||||| || || |||| ||||||||||
seq2  GAA--CTGATACACCTTTCTTAGTGTCC-TGGGC-ACTGGGCGCATACAG  137

seq1  ACAACCAAGCACACGTACATATGCACATGCACACCACATACACATAAGTA  199
      |||  | |||||||||||||||||||||||||||||||||||||| ||||
seq2  ACA--CCAGCACACGTACATATGCACATGCACACCACATACACAT-AGTA  184

seq1  AAAATAAATACTTAAAGTGGAATCAGATAATTCAATACAAACTTCAGTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATACTTAAAGTGGAATCAGATAATTCAATACAAACTTCAGTAT  234

seq1  ATAACCAAGATTATGATTTATAAACAATATGATTTATAAAAACCCCTACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGATTATGATTTATAAACAATATGATTTATAAAAACCCCTACA  284

seq1  ATACAGGTTAATCTTAACCTGCCTTTAAAATATATATTAGTATCCACACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTTAATCTTAACCTGCCTTTAAAATATATATTAGTATCCACACA  334

seq1  GGGGAGACAGATGGAGTGGGAAAGAGAGAGAATAATTTTTTAATGAGAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGACAGATGGAGTGGGAAAGAGAGAGAATAATTTTTTAATGAGAGA  384

seq1  GAAACCAATAACTCCAGGAAGCTACAGATTAAAAAAAAATAGCAGAAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAATAACTCCAGGAAGCTACAGATTAAAAAAAAATAGCAGAAGAG  434

seq1  GAAAGCCAACTCACATTGAAATAATCAGATCAATGAGAAACAACAAAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAACTCACATTGAAATAATCAGATCAATGAGAAACAACAAAAAG  484

seq1  AGATTTAAAATCACCACTGAATTTGTCTTGTGGGGAGCAGAGGGGTACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAATCACCACTGAATTTGTCTTGTGGGGAGCAGAGGGGTACAG  534

seq1  GGACTAATTATGTGGTGCAAGCTGACTTCAAACTCACGATTCGCCTCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAATTATGTGGTGCAAGCTGACTTCAAACTCACGATTCGCCTCCTG  584

seq1  GTTCAACCTTCTGAACACAGAGAGTATGTGTGTGCCAGAAGCCCAGGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACCTTCTGAACACAGAGAGTATGTGTGTGCCAGAAGCCCAGGCTA  634

seq1  ATCCTTGAAATTCTGAAAATGAAAATTATATAATTTTAATAGTCCATATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGAAATTCTGAAAATGAAAATTATATAATTTTAATAGTCCATATG  684

seq1  TTCAATAAAATCTTTAAAAAGAGACAAAAACTGGTTTTTTTGCATGGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAAATCTTTAAAAAGAGACAAAAACTGGTTTTTTTGCATGGAAA  734

seq1  GAAAATGAAAATACAACATGTTGAATTTATAGGAAGCCGTTTAAATGGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAAATACAACATGTTGAATTTATAGGAAGCCGTTTAAATGGTA  784

seq1  TCTAGGGGGAAATTTGCTAATTTAAGTACTTGTGCTAAGCATTTAAGATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGGGAAATTTGCTAATTTAAGTACTTGTGCTAAGCATTTAAGATG  834

seq1  CAGAATCTTGTCAGTTACCTAATTTCCCACCTGAAGGAAATGAAAAATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTTGTCAGTTACCTAATTTCCCACCTGAAGGAAATGAAAAATAG  884

seq1  AGTAAATGAAACTAAAAATGAAATTAAATAGTAAAACTAAGAACAGAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGAAACTAAAAATGAAATTAAATAGTAAAACTAAGAACAGAAAT  934

seq1  GAGTAAAGTAGAAAGAAAGTAGATAATTCCAAGGCTTTGGAATTATAGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGTAGAAAGAAAGTAGATAATTCCAAGGCTTTGGAATTATAGAC  984

seq1  ATCAATAAGAATAACAAACAATTAACAGAATGTGACAGCGTACATACGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAGAATAACAAACAATTAACAGAATGTGACAGCGTACATACGGG  1034

seq1  GTAGAATACATCAGAATCTGGAATTGAAAATGGGATGCCCCCATGGAAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATACATCAGAATCTGGAATTGAAAATGGGATGCCCCCATGGAAGG  1084

seq1  AATGTATTAGGAACTTTGTGCCAATGATTATGATATTTTAGCAATAATAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTAGGAACTTTGTGCCAATGATTATGATATTTTAGCAATAATAG  1134

seq1  AATTC  1154
      |||||
seq2  AATTC  1139