BAC Information

Click to search

BAC

Clone NameB6Ng01-005O02
Chromosome18 (Build37)
Map Location 22,396,349 - 22,574,974
singlet/doubletdoublet
Overlap geneLOC546708, LOC100040547, Asxl3
Upstream geneGm944, LOC665722, LOC225264, Klhl14, 4921528I01Rik
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005O02.bB6Ng01-005O02.g
ACCDH842895DH842896
length1,181983
definitionDH842895|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O02, 5' end.DH842896|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,573,781 - 22,574,974)(22,396,349 - 22,397,061)
sequence
gaattctactaaaaggctggcattcagatatcatagcactataaaataaa
tatatatattggttgacatagcgttatccttaggatttactttattttaa
agttaagcatatgtgtgtatatctgttcatgttaattcaggcaagaagaa
ggggtcagatctcctggagctggactcaggaaaactgagacaagaactct
tgaagatcaataggcactcttaagcagttagccacctctctaggcccagt
tcactatcaggcaatggcagacactgtcatttcctatacatctttacttc
tctctctgacagaataacaaatgccaatttatccttattaactttaaata
actcagtgatgctaggctgattctttcaattgtgctaagggtatcttacc
aattactggttattatccacctagatccttctagtctctgtaccaaagag
gcaatatgaggggctagagacaagaacagattgtcggcccatctctcctc
atccttctttgcttttctttcccacttctccctcacacacacacacacac
acacacacacacacacacacacacacacgtagaaaactttctcaggagga
ggggaatgggaacaaatcagtgctcacattggaagggcaaattatctctg
tcactagctgaaaactgttccctgctgtttcagtcagagttttcacaaca
ctttgaaactggcttgtgatgtcacatattcacctgggcttggatacagt
aagaagagagagaggtttctaagactgtttcttctttgagatcaaatcaa
ataacaaaacctttaatgactgtctgcatcaaggaaatgctgtaaatttt
aaaatatttttaatatgtgggaagtacatgcaggtgggctgtttgcaaag
gttgaacataacccgcactcaatagattttcactcttctaggttttccac
aactatacatggcacttttttggataggaaatatgcttgtcctgcagagc
aattatagcttgcaaaaagatacaaaagtggtgagcagggtactcagaat
aagctatttactattctttcaatgatttcccaagcatttcccttatgcac
tcaaggctatgcaagggaaatcttaaattggtcaatttgctggaattgtt
gtgggctgagttattctggtgagactaatca
gaattccagacaggactaacagatggtgcattcaagactctgctcagctt
tcataggctggagagtaaccacagcaaaccaacagagacttaattctttc
tgtgtgagttgagtatctttgccccccaaaaagtaacaggtaatggggct
ggaggaggcaaaggagcagcctccacaaatgacacacagtcaaagacagg
cacccagctgggaaatacactgggcagcccagccagtgtttacacactcc
tcccattcctctagagtcaccagcagggaatggtgagcccctgctatggc
acataaaccagacagacacaacaaacacttctaaagtgctaagattaagc
ctttttgaggccacagtctaagagatcaggccagagacctcattctaacc
caagcaaaataaaatactcaaaatgggtcccatagcctccaaacagagta
gacaaatttccaaagaataatatcaatcgtccaattccaagagccacaca
ctgaaggagaagataacaattaactgatgctaaaactcaggcaaaacaga
taatggcattgcccacaatgatagtaaaatggccactatagaaaggcttc
aacaattacaagttatattaagcaaatgaagaaaaaatacaacagaaagt
tacaatacatgaatattagggggctactaataatagcatttttgaaaatg
aaacagctgaatgggttcaaaaatagaatatggtggatgccatgcagaaa
gggactgcagtggacagtgagcttcctggagatggtccgccattctgcac
agctgtgagatgaatgtacctcagagaggcatagctccagggctttgtct
atggattgcttcttgctattgatgtgcctttttcatgtctgctatgccat
cttcctcatatctgtcatggtggactaggcatgaaggagaccctggctgc
ctgtagtctgctgtgatgcttctggagacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22573781_22574974
seq2: B6Ng01-005O02.b_44_1224 (reverse)

seq1  TGATTAGTTACTTCACAGAATAACTCAGACCCAC-ACATATCCAGCAAAT  49
      ||||||||  ||   ||||||||||||| ||||| |||  ||||||||||
seq2  TGATTAGT--CTCACCAGAATAACTCAG-CCCACAACAATTCCAGCAAAT  47

seq1  GTGACCCAAATTAGATTT-CCTGGCATAGCCTTTGAAGTTGCATTAGGGA  98
       ||||| |  | |||||| ||| |||||||| ||||   ||||| |||||
seq2  -TGACCAATTTAAGATTTCCCTTGCATAGCC-TTGA--GTGCATAAGGGA  93

seq1  AATTGCTTTGGGGAAATCACTGAAAGAATAGTAAATAGCTTATTTCCTTG  148
      || |||||  ||||||||| ||||||||||||||||||||||||    ||
seq2  AA-TGCTT--GGGAAATCATTGAAAGAATAGTAAATAGCTTATT---CTG  137

seq1  AGTACTCCTTGGCTCACCCACTTTTGTATCTTTTTTGCAAGCTATAATTG  198
      ||||| |||  ||||| ||||||||||||| |||||||||||||||||||
seq2  AGTAC-CCT--GCTCA-CCACTTTTGTATC-TTTTTGCAAGCTATAATTG  182

seq1  CTTCTTGCAGGACAAGCATATTTCCTATCCAAAAAAGTGCCATGTATAG-  247
      ||   |||||||||||||||||||||||||||||||||||||||||||| 
seq2  CT--CTGCAGGACAAGCATATTTCCTATCCAAAAAAGTGCCATGTATAGT  230

seq1  TGTGGAAAACCTAG-AGAGTGAAAATCTATTGAGTGCGGGTTATGTTCAA  296
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAACCTAGAAGAGTGAAAATCTATTGAGTGCGGGTTATGTTCAA  280

seq1  CCTTTGCAAACAGCCCACCTTGCATGTACTT-CCACATATT-AAAATATT  344
      ||||||||||||||||||| ||||||||||| ||||||||| ||||||||
seq2  CCTTTGCAAACAGCCCACC-TGCATGTACTTCCCACATATTAAAAATATT  329

seq1  TTAAAATTTACAGCATTTCCTTGATGCAGACAGTCATT-AAGGTTTTGTT  393
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAAAATTTACAGCATTTCCTTGATGCAGACAGTCATTAAAGGTTTTGTT  379

seq1  ATTTGATTTGATCTCAAAGAAGAAACAGTCTTAGAAACCTCTCTCTCTTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTGATCTCAAAGAAGAAACAGTCTTAGAAACCTCTCTCTCTTC  429

seq1  TTACTGTATCCAAGCCCAGGTGAATATGTGACATCACAAGCCAGTTTCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTATCCAAGCCCAGGTGAATATGTGACATCACAAGCCAGTTTCAA  479

seq1  AGTGTTGTG-AAACTCTGACTGAAACAGCAGGGAACAGTTTTCAGCTAGT  542
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTGAAAACTCTGACTGAAACAGCAGGGAACAGTTTTCAGCTAGT  529

seq1  GACAGAGATAATTTGCCCTTCCAATGTGAGCACTGATTTGTTCCCATTCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGATAATTTGCCCTTCCAATGTGAGCACTGATTTGTTCCCATTCC  579

seq1  CCTCCTCCTGAGAAAGTTTTCTACGTGTGTGTGTGTGTGTGTGTGTGTGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTGAGAAAGTTTTCTACGTGTGTGTGTGTGTGTGTGTGTGTGT  629

seq1  GTGTGTGTGTGTGTGTGTGAGGGAGAAGTGGGAAAGAAAAGCAAAGAAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGAGGGAGAAGTGGGAAAGAAAAGCAAAGAAGG  679

seq1  ATGAGGAGAGATGGGCCGACAATCTGTTCTTGTCTCTAGCCCCTCATATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAGAGATGGGCCGACAATCTGTTCTTGTCTCTAGCCCCTCATATT  729

seq1  GCCTCTTTGGTACAGAGACTAGAAGGATCTAGGTGGATAATAACCAGTAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTGGTACAGAGACTAGAAGGATCTAGGTGGATAATAACCAGTAA  779

seq1  TTGGTAAGATACCCTTAGCACAATTGAAAGAATCAGCCTAGCATCACTGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGATACCCTTAGCACAATTGAAAGAATCAGCCTAGCATCACTGA  829

seq1  GTTATTTAAAGTTAATAAGGATAAATTGGCATTTGTTATTCTGTCAGAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTAAAGTTAATAAGGATAAATTGGCATTTGTTATTCTGTCAGAGA  879

seq1  GAGAAGTAAAGATGTATAGGAAATGACAGTGTCTGCCATTGCCTGATAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAAAGATGTATAGGAAATGACAGTGTCTGCCATTGCCTGATAGT  929

seq1  GAACTGGGCCTAGAGAGGTGGCTAACTGCTTAAGAGTGCCTATTGATCTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGCCTAGAGAGGTGGCTAACTGCTTAAGAGTGCCTATTGATCTT  979

seq1  CAAGAGTTCTTGTCTCAGTTTTCCTGAGTCCAGCTCCAGGAGATCTGACC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTCTTGTCTCAGTTTTCCTGAGTCCAGCTCCAGGAGATCTGACC  1029

seq1  CCTTCTTCTTGCCTGAATTAACATGAACAGATATACACACATATGCTTAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTTGCCTGAATTAACATGAACAGATATACACACATATGCTTAA  1079

seq1  CTTTAAAATAAAGTAAATCCTAAGGATAACGCTATGTCAACCAATATATA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATAAAGTAAATCCTAAGGATAACGCTATGTCAACCAATATATA  1129

seq1  TATTTATTTTATAGTGCTATGATATCTGAATGCCAGCCTTTTAGTAGAAT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTATAGTGCTATGATATCTGAATGCCAGCCTTTTAGTAGAAT  1179

seq1  TC  1194
      ||
seq2  TC  1181

seq1: chr18_22396349_22397061
seq2: B6Ng01-005O02.g_69_781

seq1  GAATTCCAGACAGGACTAACAGATGGTGCATTCAAGACTCTGCTCAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACAGGACTAACAGATGGTGCATTCAAGACTCTGCTCAGCTT  50

seq1  TCATAGGCTGGAGAGTAACCACAGCAAACCAACAGAGACTTAATTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGCTGGAGAGTAACCACAGCAAACCAACAGAGACTTAATTCTTTC  100

seq1  TGTGTGAGTTGAGTATCTTTGCCCCCCAAAAAGTAACAGGTAATGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGTTGAGTATCTTTGCCCCCCAAAAAGTAACAGGTAATGGGGCT  150

seq1  GGAGGAGGCAAAGGAGCAGCCTCCACAAATGACACACAGTCAAAGACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGCAAAGGAGCAGCCTCCACAAATGACACACAGTCAAAGACAGG  200

seq1  CACCCAGCTGGGAAATACACTGGGCAGCCCAGCCAGTGTTTACACACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCTGGGAAATACACTGGGCAGCCCAGCCAGTGTTTACACACTCC  250

seq1  TCCCATTCCTCTAGAGTCACCAGCAGGGAATGGTGAGCCCCTGCTATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCCTCTAGAGTCACCAGCAGGGAATGGTGAGCCCCTGCTATGGC  300

seq1  ACATAAACCAGACAGACACAACAAACACTTCTAAAGTGCTAAGATTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACCAGACAGACACAACAAACACTTCTAAAGTGCTAAGATTAAGC  350

seq1  CTTTTTGAGGCCACAGTCTAAGAGATCAGGCCAGAGACCTCATTCTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAGGCCACAGTCTAAGAGATCAGGCCAGAGACCTCATTCTAACC  400

seq1  CAAGCAAAATAAAATACTCAAAATGGGTCCCATAGCCTCCAAACAGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAATAAAATACTCAAAATGGGTCCCATAGCCTCCAAACAGAGTA  450

seq1  GACAAATTTCCAAAGAATAATATCAATCGTCCAATTCCAAGAGCCACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTTCCAAAGAATAATATCAATCGTCCAATTCCAAGAGCCACACA  500

seq1  CTGAAGGAGAAGATAACAATTAACTGATGCTAAAACTCAGGCAAAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGAAGATAACAATTAACTGATGCTAAAACTCAGGCAAAACAGA  550

seq1  TAATGGCATTGCCCACAATGATAGTAAAATGGCCACTATAGAAAGGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCATTGCCCACAATGATAGTAAAATGGCCACTATAGAAAGGCTTC  600

seq1  AACAATTACAAGTTATATTAAGCAAATGAAGAAAAAATACAACAGAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTACAAGTTATATTAAGCAAATGAAGAAAAAATACAACAGAAAGT  650

seq1  TACAATACATGAATATTAGGGGGCTACTAATAATAGCATTTTTGAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACATGAATATTAGGGGGCTACTAATAATAGCATTTTTGAAAATG  700

seq1  AAACAGCTGAATG  713
      |||||||||||||
seq2  AAACAGCTGAATG  713