BAC Information

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BAC

Clone NameB6Ng01-020B23
Chromosome18 (Build37)
Map Location 13,859,097 - 13,859,826
singlet/doubletsinglet
Overlap geneZfp521
Upstream gene2810439F02Rik, Cabyr, LOC665356, Osbpl1a, LOC435556, Impact, Hrh4, EG383354, LOC665379, LOC100040358
Downstream geneLOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020B23.bB6Ng01-020B23.g
ACCDH853011DH853012
length1,224730
definitionDH853011|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B23, 5' end.DH853012|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaagacattgaggagctcttgagcagaaatgaagtgggaga
tgaaatggaaaaacccaatagctaaactagaaactcaaaaggaaacatga
gaagtcaagtgagtcaagcagaggactgaagacagagcagagaatctaga
acaagtatgaaaaaaggaaagactcaggaaaggaacacaggaaatgcagg
gcatcataaaaaaaaaattcagagttgtcgaattataggtatagatgagg
gaaaagaatccaaagttggtagcataaaccagatcttcaactagatcata
aaagaaaagttctccaactagaaaaggcataaccatacaaatacaagaag
catgtagaataccaagcagtcgtgaccagaaaagaaaacactgagtatgc
atgacaaagaaagtacaaaaaaccaagtcactcaaaggaaaacatatcag
aacagtaactaaattctcagtgaaaactttgaaagccagaagagcctgga
aaataagtttctgagtcctaagacaccactttgaccaacgtagattaaca
taaccagtgaaactgtctgccataattgaaggagaaagaaaaacttttca
taacataaacaaacaacctagagaaacttatatgcaacacatcaaactta
aagaaaacacaggaggccatatttcaggctaaaaggaagaatgaacatag
ccaagagagcatggagagaaatgtggggctattactctactaagacacaa
aggtatcacctggaaaacaaacaataacccaaaacaaacaacatgacact
tcacacacatgttccaataataactttaaatattaatgatctagaatttt
caatcagaagacacaggataactaaatggatcaacaaggaaactccatct
ctttgctgtctacaagaacacatcttagtgttaaaggtggctataatcta
aaagtacaaggatagacaaaagtgctctaatcaaacaggaccaggaagat
acgtaactaaatagctttaaactacaaaagaatcagaagagatacatcat
tctatcatggaacattagccagaagaaatggtttctaaaatattatatgc
actaactctggtggaccattcatttttaaaaagtatactgatctaagcaa
ttggccagcttgacatcttgggaaccgtatggattctgaatagggcactg
gtctgaaagacagttccgaacact
gaattcaaattaacttggaggagcaaattgtataaggacgtgaaggttat
agattgctctctccatagttacagcacacctctgtgtgaagggattaaag
ggcggcctctctggtagctcagaatacttggaggggtgaggagactgtca
cagaccaagaagcaaagcagaaaaggcgcccaaaagtggcatgagaggag
gaacgtcacatggtgttcttagaaaccaagtctctttggtggaagacact
gctgtcattttaatgatcagaaataccctagcagaagtggtgtgcaagtg
acagtataagaatactatacttccttagagactaagacagaatggccaga
tatctctcagtgattgagggtgcttgccacagagcctgagggcctgagct
ccatccctggggaatgcactcggtggaagggagaagcaactccacgaagc
tgtcttctgacccttagctggcctcctggcccactagaggtttcttctct
tggtttctctgtgagctgtttaaaaacaaaattgggttcagcggatgcaa
aggagacttccagaacggggtcctgatgctgtcttaagcatagaaaaaga
tacagagaagggaagagagacaggggacgatgcaaaggagacttccagaa
cggggtcctgatgctgtcttaagcatagagaacggtacagagaagggaag
agagacaggggaggaatgagggtggtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_13859097_13859826
seq2: B6Ng01-020B23.g_65_794 (reverse)

seq1  TCCCACCACCCTCATTCCTCCCCTGTCTCTCTTCCCTTCTCTGTACCGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCACCCTCATTCCTCCCCTGTCTCTCTTCCCTTCTCTGTACCGTT  50

seq1  CTCTATGCTTAAGACAGCATCAGGACCCCGTTCTGGAAGTCTCCTTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCTTAAGACAGCATCAGGACCCCGTTCTGGAAGTCTCCTTTGCA  100

seq1  TCGTCCCCTGTCTCTCTTCCCTTCTCTGTATCTTTTTCTATGCTTAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCCCTGTCTCTCTTCCCTTCTCTGTATCTTTTTCTATGCTTAAGAC  150

seq1  AGCATCAGGACCCCGTTCTGGAAGTCTCCTTTGCATCCGCTGAACCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGGACCCCGTTCTGGAAGTCTCCTTTGCATCCGCTGAACCCAAT  200

seq1  TTTGTTTTTAAACAGCTCACAGAGAAACCAAGAGAAGAAACCTCTAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTAAACAGCTCACAGAGAAACCAAGAGAAGAAACCTCTAGTGG  250

seq1  GCCAGGAGGCCAGCTAAGGGTCAGAAGACAGCTTCGTGGAGTTGCTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAGGCCAGCTAAGGGTCAGAAGACAGCTTCGTGGAGTTGCTTCTC  300

seq1  CCTTCCACCGAGTGCATTCCCCAGGGATGGAGCTCAGGCCCTCAGGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACCGAGTGCATTCCCCAGGGATGGAGCTCAGGCCCTCAGGCTCT  350

seq1  GTGGCAAGCACCCTCAATCACTGAGAGATATCTGGCCATTCTGTCTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAGCACCCTCAATCACTGAGAGATATCTGGCCATTCTGTCTTAGT  400

seq1  CTCTAAGGAAGTATAGTATTCTTATACTGTCACTTGCACACCACTTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGGAAGTATAGTATTCTTATACTGTCACTTGCACACCACTTCTGC  450

seq1  TAGGGTATTTCTGATCATTAAAATGACAGCAGTGTCTTCCACCAAAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTATTTCTGATCATTAAAATGACAGCAGTGTCTTCCACCAAAGAGA  500

seq1  CTTGGTTTCTAAGAACACCATGTGACGTTCCTCCTCTCATGCCACTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTCTAAGAACACCATGTGACGTTCCTCCTCTCATGCCACTTTTG  550

seq1  GGCGCCTTTTCTGCTTTGCTTCTTGGTCTGTGACAGTCTCCTCACCCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCTTTTCTGCTTTGCTTCTTGGTCTGTGACAGTCTCCTCACCCCTC  600

seq1  CAAGTATTCTGAGCTACCAGAGAGGCCGCCCTTTAATCCCTTCACACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTCTGAGCTACCAGAGAGGCCGCCCTTTAATCCCTTCACACAGA  650

seq1  GGTGTGCTGTAACTATGGAGAGAGCAATCTATAACCTTCACGTCCTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTGTAACTATGGAGAGAGCAATCTATAACCTTCACGTCCTTATA  700

seq1  CAATTTGCTCCTCCAAGTTAATTTGAATTC  730
      ||||||||||||||||||||||||||||||
seq2  CAATTTGCTCCTCCAAGTTAATTTGAATTC  730