BAC Information

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BAC

Clone NameB6Ng01-020M09
Chromosome18 (Build37)
Map Location 27,472,391 - 27,472,990
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646, EG271505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020M09.bB6Ng01-020M09.g
ACCDH853472DH853473
length1,168953
definitionDH853472|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M09, 5' end.DH853473|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctaggttgttttgatttgcatttccctgatcattaaggatgtt
aaaatttttttcaggtgcttctcagcccttcagtattcctcagcttagaa
ttctttgtttagctctgaaccccatttttaatggggttatttaaatttct
gaagtccagcaacttgagctctttgtatatattggatattagtcccctat
cagatttagaattggtaaaaattctttcacaatcttttggtggccttttt
ttgtcttattggcagtgttttttgccttacagaagctttgaaattttatg
aggtcccatttgtcaattcttgatcttacagcacaagccattgctgtttt
gtttaggatttttttcccctgtgcacatatctttgaggctttcccccact
tcctcctctataaatttcaatgtctctgtttttatttggaattctttgat
ccacttagacttgagatttgtacaaggtgataagaatggatcaattcaaa
ttcttataaatgatatctgccagttctgccagcaccatttattgaaaatg
ctgtctttttccacttaatggttttagctcctttgtcaaagatcaagtaa
ccataggtgtgtggattaatttctgggtcttcaattctattccattgatc
tacctgtctgttgctgtaccagtaccacgcagttttttatcacaattgct
ctgtagtacagttgaggtcaagcatggttattctaccagaagttcttcta
ttgttgagaatagtttttgctatcttaggttttttgttattccattgaat
ttgcacattgccctttctaactcagtgaagaattgagttggattttgaga
gagattgcattgcatctgtagatttctttcagcaaggtagccatttttac
tatattaatcttgccaatccatgagcatgggagatctttctatcttttga
gtttctttcttgaagttcttatcatacagatcttttacttccttagtaga
gtcacacaagtattttatatttttttgacaatatgaaggtgtgtttccta
actcttctcagctttaatcttgtataacaagacatgcttatgagtaattt
attcagtatgcctgaccggatatacagctcaggtctcgggaatttaagtc
gctcttttattttccatc
gaattccaagttcagtgacagaccttgtgccaaaacataaagcagagaac
aattgaagagacatgttgatctgtcttcctcattgtttgccaatataaat
atcacatacatacataagcacacacacacacacacacacacacacacaca
cacacacacacacaaattcataaaatgggaacgcttggagagagagagag
ggaaagggaagggaaggcagagggggaagcaagtaggttttgcttctaga
tgccacttttggtctcattaaagaagcatgccatgtgtggttctgtgttt
ccacctcatagaggggtgtcaggacaccactcgtttagcaaaacacagag
gtgttaggccagttcctttttctccttagggattcatgaggtgcaaacat
gccactcaagggagacaaatctcagcctgtgtttctccacatgagaaatg
gtgagggctaggcctgtggctatggttctcaagtttctgggtacccagat
gttgctagaaaccttgaagagttgaggacaggcactggaggactgagagg
aacaccaggctgggatgaatacagcttagctcagggtgagtaccaggggt
tcagagggacctactgtgggagacttggtgctgctcagtatggcaaaagt
ctctctccccaaggcggtccttgaggaaggagacagtcattgattgttca
aaatgcttattcatggtgacaaaggatgcaaatgactactgagagtagag
cagatattaaacaagttttgcaagaaagaatgtccaggaatggaagtgta
taggctaaacctatctagataccttattaccatggagaactctaggttct
atgctgtttgacagttgtcatggtcctcttagttgggtattgttgccatc
tgctcaagacagaatctggtcagacagattaaatgcctaccattctcata
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27472391_27472990
seq2: B6Ng01-020M09.g_71_670 (reverse)

seq1  ACCCCTGGTACTCACCCTGAGCTAAGCTGTATTCATCCCAGCCTGGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGGTACTCACCCTGAGCTAAGCTGTATTCATCCCAGCCTGGTGTT  50

seq1  CCTCTCAGTCCTCCAGTGCCTGTCCTCAACTCTTCAAGGTTTCTAGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGTCCTCCAGTGCCTGTCCTCAACTCTTCAAGGTTTCTAGCAAC  100

seq1  ATCTGGGTACCCAGAAACTTGAGAACCATAGCCACAGGCCTAGCCCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTACCCAGAAACTTGAGAACCATAGCCACAGGCCTAGCCCTCAC  150

seq1  CATTTCTCATGTGGAGAAACACAGGCTGAGATTTGTCTCCCTTGAGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCATGTGGAGAAACACAGGCTGAGATTTGTCTCCCTTGAGTGGC  200

seq1  ATGTTTGCACCTCATGAATCCCTAAGGAGAAAAAGGAACTGGCCTAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCACCTCATGAATCCCTAAGGAGAAAAAGGAACTGGCCTAACAC  250

seq1  CTCTGTGTTTTGCTAAACGAGTGGTGTCCTGACACCCCTCTATGAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTTTTGCTAAACGAGTGGTGTCCTGACACCCCTCTATGAGGTGG  300

seq1  AAACACAGAACCACACATGGCATGCTTCTTTAATGAGACCAAAAGTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGAACCACACATGGCATGCTTCTTTAATGAGACCAAAAGTGGCA  350

seq1  TCTAGAAGCAAAACCTACTTGCTTCCCCCTCTGCCTTCCCTTCCCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGCAAAACCTACTTGCTTCCCCCTCTGCCTTCCCTTCCCTTTCC  400

seq1  CTCTCTCTCTCTCCAAGCGTTCCCATTTTATGAATTTGTGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCCAAGCGTTCCCATTTTATGAATTTGTGTGTGTGTGTG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTATGTATGTATGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTATGTATGTATGTGAT  500

seq1  ATTTATATTGGCAAACAATGAGGAAGACAGATCAACATGTCTCTTCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATTGGCAAACAATGAGGAAGACAGATCAACATGTCTCTTCAATT  550

seq1  GTTCTCTGCTTTATGTTTTGGCACAAGGTCTGTCACTGAACTTGGAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGCTTTATGTTTTGGCACAAGGTCTGTCACTGAACTTGGAATTC  600