BAC Information

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BAC

Clone NameB6Ng01-021B12
Chromosome18 (Build37)
Map Location 63,482,886 - 63,621,129
singlet/doubletdoublet
Overlap gene9030411M15Rik
Upstream geneHtr4, Fbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik
Downstream geneLOC627792, Txnl1, Wdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B12.bB6Ng01-021B12.g
ACCDH853699DH853700
length520823
definitionDH853699|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B12, 5' end.DH853700|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,620,605 - 63,621,129)(63,482,886 - 63,483,711)
sequence
aagtagatttaagaacttcatgccccttgggaaggtgagagtggagaggc
tttgtgtgtctatatttagtcttgacccacaggccaaactttagaattaa
aacaaaaaactaagagccaggcatggtggcacatgcttttaattcctgtg
cttggaaggaagagtcaggcaggtctctgtgccttcaaggctagccttaa
aggtctatatagcgagtttcaggacagccagagctatatactgagaccct
gtcttaaaaaaaaccaaaccaaaccaaaccaaacctaaccaaaccaatcc
aaaacaaaacaaaacaaaactaaacaaaacaaaccaaaacaaaccaaaac
aaaccaaaccaaaacaaaactggcatgcagccatgcacctgaaatactgt
ctactggggacatggcagtaggaaggttgagttcagagtagcctgtgctt
cttatcaaggctcctagcagtaataaaatcactaaacagctctctatgga
tgagtgtgtctgtaatttgg
gaattctccgactgtataaatcttatttctccctaatcagatagttccat
gtgtggtgtataatgaatttctgagcaactttattaccctgctgtgtgtg
tctgtggtggggtacactgggctcaacacatgacatcagtatgtgataga
aagctctctacactgagaatctgagaacttgtcctctacggggattgtgg
gatccagcccctaactagtttttcaaaacagaagttttagtgtttgggca
tataaatgatcttctttctttatcagtgcagtctataacccaggcatcaa
aaggtatttctattcgaatagtcttcatcttgctgacgacaccaagctca
agataagtggatgcttcttttttttttttttttcttataaaaaacaacat
ttaactggggctggcttacagattcagaggttcagtccattaccatcaag
gtgggaacatggcagcatccaggcagtcatggtgcaggaggagctgagag
ttctatgtcttcatccaaaggctgctagtggaagactgactttccaggca
actaggatgaggatcttatgcccacaccctcagtgacacacccattccaa
ccaggtcacacctattccaacaagggccacacctccagatggtgccactc
ccgggtccaaggatatacaaaccatcacagatatgttttcacctattgag
gtgatactcccctcattctctccatcttgaaaattaggatgctgttgttt
cctccttttattctgggatgaacaagagtgtagggtcctaataatgtttt
tatgattcttgttgtctagaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63620605_63621129
seq2: B6Ng01-021B12.b_36_561 (reverse)

seq1  CCAAATTACAGACACACTCATCCATAGAGAGCTGTTTAGTGATTTTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTACAGACACACTCATCCATAGAGAGCTGTTTAGTGATTTTATTA  50

seq1  CTGCTAGGAGCCTTGCTAAGTAGCACAGGCTACTCTGAACTCAACCTTCC  100
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  CTGCTAGGAGCCTTGATAAGAAGCACAGGCTACTCTGAACTCAACCTTCC  100

seq1  TACTGCCATGTCCCCAGTAGACAGTATTTCAGGTGCATGGCTGCATGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCATGTCCCCAGTAGACAGTATTTCAGGTGCATGGCTGCATGCCA  150

seq1  GTTTTGTTTTGGTTTGGTTTGTTTTGGTTTGTTTTGGTTTGTTTTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTTTTGTTTTGGTTTGGTTTGTTTTGGTTTGTTTTGGTTTGTTTTGTTTA  200

seq1  GTTTTGTTTTGTTTTGTTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTT  250
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTGGATTGGTTTGGTTAGGTTTGGTTTGGTTT  250

seq1  GGTTTGGTTTTTTTTAAGACAGGGTCTCAGTATATAGCTCTGGCTGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTTTTTTTAAGACAGGGTCTCAGTATATAGCTCTGGCTGTCCT  300

seq1  GAAACTCGCTATATAGACCTTTAAGGCTAGCCTTGAAGGCACAGAGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCGCTATATAGACCTTTAAGGCTAGCCTTGAAGGCACAGAGACCT  350

seq1  GCCTGACTCTTCCTTCCAAGCACAGGAATTAAAAGCATGTGCCACCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACTCTTCCTTCCAAGCACAGGAATTAAAAGCATGTGCCACCATGC  400

seq1  CTGGCTCTTAGTTTTTTGTTTTAATTCTAAAGTTTGGCCTGTGGGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTTAGTTTTTTGTTTTAATTCTAAAGTTTGGCCTGTGGGTCAAG  450

seq1  ACTAAATATAGACACACAAAGCCTCTCCACTCTCACCTTCCCAAGGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATATAGACACACAAAGCCTCTCCACTCTCACCTTCCCAAGGGGCA  500

seq1  TGAAGTTCTT-AATCTACTTGAATTC  525
      |||||||||| |||||||||||||||
seq2  TGAAGTTCTTAAATCTACTTGAATTC  526

seq1: chr18_63482886_63483711
seq2: B6Ng01-021B12.g_71_893

seq1  GAATTCTCCGACTGTATAAATCTTATTTCTCCCTAATCAGATAGTTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGACTGTATAAATCTTATTTCTCCCTAATCAGATAGTTCCAT  50

seq1  GTGTGGTGTATAATGAATTTCTGAGCAACTTTATTACCCTGCTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGTATAATGAATTTCTGAGCAACTTTATTACCCTGCTGTGTGTG  100

seq1  TCTGTGGTGGGGTACACTGGGCTCAACACATGACATCAGTATGTGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTGGGGTACACTGGGCTCAACACATGACATCAGTATGTGATAGA  150

seq1  AAGCTCTCTACACTGAGAATCTGAGAACTTGTCCTCTACGGGGATTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCTACACTGAGAATCTGAGAACTTGTCCTCTACGGGGATTGTGG  200

seq1  GATCCAGCCCCTAACTAGTTTTTCAAAACAGAAGTTTTAGTGTTTGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGCCCCTAACTAGTTTTTCAAAACAGAAGTTTTAGTGTTTGGGCA  250

seq1  TATAAATGATCTTCTTTCTTTATCAGTGCAGTCTATAACCCAGGCATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGATCTTCTTTCTTTATCAGTGCAGTCTATAACCCAGGCATCAA  300

seq1  AAGGTATTTCTATTCGAATAGTCTTCATCTTGCTGACGACACCAAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATTTCTATTCGAATAGTCTTCATCTTGCTGACGACACCAAGCTCA  350

seq1  AGATAAGTGGATGCTTCTTTTTTTTTTTTTTTTCTTATAAAAAACAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGTGGATGCTTCTTTTTTTTTTTTTTTTCTTATAAAAAACAACAT  400

seq1  TTAACTGGGGCTGGCTTACAGATTCAGAGGTTCAGTCCATTACCATCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGGGCTGGCTTACAGATTCAGAGGTTCAGTCCATTACCATCAAG  450

seq1  GTGGGAACATGGCAGCATCCAGGCAGTCATGGTGCAGGAGGAGCTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAACATGGCAGCATCCAGGCAGTCATGGTGCAGGAGGAGCTGAGAG  500

seq1  TTCTATGTCTTCATCCAAAGGCTGCTAGTGGAAGACTGAC-TTCCAGGCA  549
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCTATGTCTTCATCCAAAGGCTGCTAGTGGAAGACTGACTTTCCAGGCA  550

seq1  ACTAGGATGAGGATCTTATGCCCACACCCTCAGTGACACACCCATTCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGATGAGGATCTTATGCCCACACCCTCAGTGACACACCCATTCCAA  600

seq1  CCAGGTCACACCTATTCCAACAA-GGCCACACCTCCAGATGGTGCCACTC  648
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAGGTCACACCTATTCCAACAAGGGCCACACCTCCAGATGGTGCCACTC  650

seq1  CCGGGTCCAAGGATATACAAACCATCACAGATATGTTTCCACCTTATTGA  698
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  CCGGGTCCAAGGATATACAAACCATCACAGATATGTTTTCACC-TATTGA  699

seq1  GGTGATTACTCCCCTCATTCTCTCCATCTTTGAAAATTAGGATGCTGTTT  748
      ||||| |||||||||||||||||||||| |||||||||||||||||| ||
seq2  GGTGA-TACTCCCCTCATTCTCTCCATC-TTGAAAATTAGGATGCTG-TT  746

seq1  GTTTCCTCCTTTTATTCTGGGATGAACAAGAGTGGTAGGGTCCTAAGAGT  798
      ||||||||||||||||||||||||||||||||| |||||||||||| | |
seq2  GTTTCCTCCTTTTATTCTGGGATGAACAAGAGT-GTAGGGTCCTAATAAT  795

seq1  GTCTTTATGATGCTTG-TGTCTAGGAGGT  826
      || |||||||| |||| |||||| |||||
seq2  GTTTTTATGATTCTTGTTGTCTA-GAGGT  823