BAC Information

Click to search

BAC

Clone NameB6Ng01-022D14
Chromosome18 (Build37)
Map Location 66,814,671 - 66,815,733
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp532, 5330437I02Rik, Sec11c, Grp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
Downstream geneMc4r, Gnal, Chmp1b, Mppe1, Impa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1, Cep76, Tnfsf5ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022D14.bB6Ng01-022D14.g
ACCDH854501DH854502
length1,0541,155
definitionDH854501|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D14, 5' end.DH854502|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaacaggactcaagtacttccgtacgttttgtgtgcagggtac
catttgttgtctgttctgggctaatgctggaaggtagtttgcagtggaaa
aaggctcactaaggagattatagcctggtgaagtaaagagcagaccatgt
tttcctcaccttataaaaaacgttggcttcgttagggagtgcagtcctca
ccgctctccctatctccctgaggggtgttggtagcacaaggcatgctgat
atccagccttctgctgttcctgtgattcacacacttcatttcttgtctgt
cctgggagactggtattttcttccagtatccgtgaaacaggaacaatata
accttgttccctgcaagtaagacaagattgcatcccactcttgactctcg
ttgtgacatccctgaggtgatcccatgggaaccacatcaccttcaccttc
cttctgagtttcatgaagtgagatgctttctttgttcttctctgagcatt
cctgaaggtttcggggttagtaaacacagaagctgctgcgcatgtatgcg
ccatttccgggctgctagtgagaacatgctgactcactcccacagatcca
ccctttttagtttggaagttggcaactcagtgggagccagagttctgtat
tctgaccttgtggaccctacctcagggggcgaccagcatagggaaccgtg
cctgtcttaggttgcccctggatattgggtcttacccattattgactacc
ggctctggaatgtcagcttccttggagagcgagccctatggagtaggttg
gcctattggaaggcctttcttatcttcgagattggatctgtgtctgacct
cactttaacttaatgatctacctgaagtcctatttataaatacagtcaca
ttggaattagggttcttctctgctctagcaggatgcacctaagtctctca
ctatgccactggttctcatgtctgatgggtctcccacttccagggtcttc
agaatgtgctcagcattctgctctgcactcccagggctttttgctttgtt
catc
gaattcattacttttaaaggttttagggtaaattgccttgggtttagggc
ccataagaccatttcatctacatacagataacacacttctccaatttggt
gtcccctacttatttctcttgcctcatgactttgcctaggacttccagca
tgtggccatgacgtgaggacagtggagtctctggttttattcttatctct
aaaggaagctttcagtttggtttttaaaaacttttaagtatgatatgatt
gctggagttttcacatctaagaatttttcttattttcccagttggttaac
tattttgtagtcatcctaaagaatactgaattttttcaactgcttttttt
tatatatatatctgaagtgattatgtgagttgtatccatctatctctgtt
aagttgcatgtgctgaattacttacatatgtcaaaccctcctggcgtcct
gggtataaatttcaaatcattttgaaaggtatatgaacctttcaatgtac
tgctgtgttgggttttggatacttggaaacaatttaataaaggagaaaga
aaatgtatgtgctgaaaaattatctcactggaagaaaatttaaaagacag
aagtaaatggaaaaacatcttttatttgtgaacaaaagactaaacattgt
tttaaaataattattaattaatttaaatttgcatcctggctgcagtttcc
cctccttccagtccttttctcccacgtccccttccccaacccacttctcc
tctgttttatcttcagaaaattggaggcctccccttttttgaagactaaa
cattgttaaaatcatagtaaacaaagatgtctacagatttaatacaaata
aaaaagttctcatagacttaataagaaactatgaaaagcacctactagct
taagcaattttggaaaaaagcaagctgatgtatcagatttctttatttaa
acatactagaaatctatagcaacccaatagtatgtgtggcaatataaaag
aatactaactgcacctaaaccatgggaatgaaagaatacctacggccagg
tgtgacttgtgggtattaccattacgtctcgcagtgacaacatatggaaa
gagcttgattcaagaagcaggagagttcacgccgtgcagaggaagggtgt
aggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_66814671_66815733
seq2: B6Ng01-022D14.b_43_1096

seq1  GAATTCCCAACAGGACTCAAGTACTTCCGTACGTTTTGTGTGCAGGGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACAGGACTCAAGTACTTCCGTACGTTTTGTGTGCAGGGTAC  50

seq1  CATTTGTTGTCTGTTCTGGGCTAATGCTGGAAGGTAGTTTGCAGTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGTCTGTTCTGGGCTAATGCTGGAAGGTAGTTTGCAGTGGAAA  100

seq1  AAGGCTCACTAAGGAGATTATAGCCTGGTGAAGTAAAGAGCAGACCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCACTAAGGAGATTATAGCCTGGTGAAGTAAAGAGCAGACCATGT  150

seq1  TTTCCTCACCTTATAAAAAACGTTGGCTTCGTTAGGGAGTGCAGTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCACCTTATAAAAAACGTTGGCTTCGTTAGGGAGTGCAGTCCTCA  200

seq1  CCGCTCTCCCTATCTCCCTGAGGGGTGTTGGTAGCACAAGGCATGCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCTCCCTATCTCCCTGAGGGGTGTTGGTAGCACAAGGCATGCTGAT  250

seq1  ATCCAGCCTTCTGCTGTTCCTGTGATTCACACACTTCATTTCTTGTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCCTTCTGCTGTTCCTGTGATTCACACACTTCATTTCTTGTCTGT  300

seq1  CCTGGGAGACTGGTATTTTCTTCCAGTATCCGTGAAACAGGAACAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGACTGGTATTTTCTTCCAGTATCCGTGAAACAGGAACAATATA  350

seq1  ACCTTGTTCCCTGCAAGTAAGACAAGATTGCATCCCACTCTTGACTCTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTCCCTGCAAGTAAGACAAGATTGCATCCCACTCTTGACTCTCG  400

seq1  TTGTGACATCCCTGAGGTGATCCCATGGGAACCACATCACCTTCACCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACATCCCTGAGGTGATCCCATGGGAACCACATCACCTTCACCTTC  450

seq1  CTTCTGAGTTTCATGAAGTGAGATGCTTTCTTTGTTCTTCTCTGAGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGTTTCATGAAGTGAGATGCTTTCTTTGTTCTTCTCTGAGCATT  500

seq1  CCTGAAGGTTTCGGGGTTAGTAAACACAGAAGCTGCTGCGCATGTATGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGTTTCGGGGTTAGTAAACACAGAAGCTGCTGCGCATGTATGCG  550

seq1  CCATTTCCGGGCTGCTAGTGAGAACATGCTGACTCACTCCCACAGATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCGGGCTGCTAGTGAGAACATGCTGACTCACTCCCACAGATCCA  600

seq1  CCCTTTTTAGTTTGGAAGTTGGCAACTCAGTGGGAGCCAGAGTTCTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTAGTTTGGAAGTTGGCAACTCAGTGGGAGCCAGAGTTCTGTAT  650

seq1  TCTGACCTTGTGGACCCTACCTCAGGGGGCGACCAGCATAGGGAACCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTTGTGGACCCTACCTCAGGGGGCGACCAGCATAGGGAACCGTG  700

seq1  CCTGTCTTAGGTTGCCCCTGGATATTGGGTCTTACCCATTATTGACTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTAGGTTGCCCCTGGATATTGGGTCTTACCCATTATTGACTACC  750

seq1  GGCTCTGGAATGTCAGCTTCCTTGGAGAGCGAGCCCTATGGAGTAGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGAATGTCAGCTTCCTTGGAGAGCGAGCCCTATGGAGTAGGTTG  800

seq1  GCCTATTGGAAGGCCTTTCTTATCTTCGAGAATTGGATCTGTGTCTGACC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCCTATTGGAAGGCCTTTCTTATCTTCGAG-ATTGGATCTGTGTCTGACC  849

seq1  TCACTTTAAACTTAATGATCTACCTGAAGTTCCTATTTATAAATACAGTC  900
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TCACTTT-AACTTAATGATCTACCTGAAG-TCCTATTTATAAATACAGTC  897

seq1  ACATTGGAAATTAGGGTTTCTTCTCCTGACTCTAGCAGGGATGCACCTAA  950
      ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||
seq2  ACATTGG-AATTAGGG-TTCTTCT-CTG-CTCTAGCA-GGATGCACCTAA  942

seq1  GTCTCTCACATATGCCACTGTTTCTCATGTTCTGATGTGTCTCCCACTTC  1000
      ||||||||| |||||||||| |||||||| ||||||| ||||||||||||
seq2  GTCTCTCAC-TATGCCACTGGTTCTCATG-TCTGATGGGTCTCCCACTTC  990

seq1  CAGTGTCTTCAGATTGT-CTCAGCATTTCTGC-CTGCACTCCCAGGGCTT  1048
      ||| ||||||||| ||| ||||||| |||||| |||||||||||||||||
seq2  CAGGGTCTTCAGAATGTGCTCAGCA-TTCTGCTCTGCACTCCCAGGGCTT  1039

seq1  TTTGCTTTGCTCATC  1063
      ||||||||| |||||
seq2  TTTGCTTTGTTCATC  1054