BAC Information

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BAC

Clone NameB6Ng01-022P22
Chromosome18 (Build37)
Map Location 58,612,711 - 58,716,895
singlet/doubletdoublet
Overlap geneSlc27a6
Upstream gene1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneIsoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P22.bB6Ng01-022P22.g
ACCDH855041DH855042
length1,0021,056
definitionDH855041|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P22, 5' end.DH855042|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,715,893 - 58,716,895)(58,612,711 - 58,613,772)
sequence
gaattctttcagggacggagggtaccagtagctcctcccccaaaatggca
agaagcagaaattctatagagatattctttagttctattgctatttgctg
atctacagcaaagtgcttgaggaggtgtgggaggagctaagtcactggct
gtggggatggaaatactattgcatacgcatatcttacattccttatcacc
tacctcaaagtattagacaggaagtatggatagaaaggggagggcaggaa
ataggttggtttgctttgggcacagcagaccacagtccatactctacctc
cgcccaccaccacggcagtgggttcacaggtgttgatgcagtgtaggagg
gaatcgaagcgaaggttggagttgaggaaggccaccacgcagcccagttt
agccaggccaaaccacacatgaacgaagtcgggctcgttgctcatcaaca
aagccacaacgtccccccttttcagcgaggagtggttcaggagagcgtgg
gctattctgttactcctcttgtccacgtcctcgtaggtgtagacgtcccc
ctcataaatgatgaaggctttccgtggttgcttcctggtgtggctcagga
acttatccagcaccgtgaccagctcccccctcagttttgtacatctccat
ctgaattccgtagcgcaccaccttcagcaagtaccagaaatcatcccaga
aatacgggaacagaagtttctgcaggaaatgcagggagagcagtccagcc
cccaatcctgtgagccatgacaggagcatgggtgcccagacctccagcag
acccgatgggtcctagcagtgtctctttcttttccaagagtttcacctct
ttttgccctggagactcctgtcctgaaagctcagaggctggcacctgtag
tctggcttaagatgtctttgtaaatcccatgaaagaaatcaaaggtttcg
ccagaaagctacagaacgctggtggatacccctggggcattgggctagac
at
gaattccaatgaacagtgaaacatctggagggattttaaaaataccaact
cccgagccatacccagaattgtggattcagcctctagtggaggacagaga
gacaattatttctaaaattatctcagtcattattaaaagtcactaggata
gcctcctaaagattccctcctttttaatcttttcaagtaaaatgcaacca
taaataattacctgtttttcttctgagtaagcaagaagagttatctagca
tctagtcagtatctaaagcatggaaagcaggttatacacaaaacatcgag
aaggaaactgactcacggtgtcaggattcatagccctgggcacatgccct
gctctggctgtaataaatagcatgaccaaaagcaacttggggaaaaatgg
tttacttcatcttacactttgcagtccatcacctagaagcaaaaacagaa
agccagaggcaggaactgaagcagagaccatggcttcttactgttttgcc
cccaggctctgattccactgcctctcttacacagtccagggccacctgtc
tagggacagtaccgtccactctctggggtatcctacatcaatcagtaatc
gaaagaattccctacagacatgcccagacgtcaatctcatggagacacaa
tacaatccctgcgtcccttttcccaggctcctcaggttgacaagtcatgc
taagcaagataggtatcataatgcaaactctttcagcacgaggatgagag
aatccagtggatcatcccagcactgttttcccctgtgtgcaaccattgtc
tcacggagctcgtgcttcgagatcatctctgcattctcaggagcttaacg
cccctcactgacccactactaatcgatttgtttatgatgtcaaacttcta
aattctgttcaaattattgtcaattcatactccatcgtgccttgcaagaa
ttgttttggacattcccactttgtatgtgacaatatgtttaatctctgac
taatttaatggggaataactccatgcttattgtacctcatgtatatttgt
catgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58715893_58716895
seq2: B6Ng01-022P22.b_43_1043 (reverse)

seq1  TGTCTAGCCCAATGCCCCAGGGCGTAT-CACCAGCGTTCTGTAGCTTTCT  49
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TGTCTAGCCCAATGCCCCAGGG-GTATCCACCAGCGTTCTGTAGCTTTCT  49

seq1  GGGCGAAAACCTTTGATTTCTTTCATGGGATATACAAAGACATCTTGAGC  99
       |||| ||||||||||||||||||||||||| |||||||||||||| |||
seq2  -GGCG-AAACCTTTGATTTCTTTCATGGGATTTACAAAGACATCTTAAGC  97

seq1  CAGAACTACAGGTGCCAGCCTCTGAGCTTTCAGGACAGGAGTCTCCAGGG  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAG-ACTACAGGTGCCAGCCTCTGAGCTTTCAGGACAGGAGTCTCCAGGG  146

seq1  CAAAAAGAGGTGAAACTCTTGGAAAAGAAAGAGACACTGCTAGGACCCAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAGGTGAAACTCTTGGAAAAGAAAGAGACACTGCTAGGACCCAT  196

seq1  CGGGTCTGCTGGAGGTCTGGGCACCCATGCTCCTGTCATGGCTCACAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTCTGCTGGAGGTCTGGGCACCCATGCTCCTGTCATGGCTCACAGGA  246

seq1  TTGGGGGCTGGACTGCTCTCCCTGCATTTCCTGCAGAAACTTCTGTTCCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGCTGGACTGCTCTCCCTGCATTTCCTGCAGAAACTTCTGTTCCC  296

seq1  GTATTTCTGGGATGATTTCTGGTACTTGCTGAAGGTGGTGCGCTACGGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTGGGATGATTTCTGGTACTTGCTGAAGGTGGTGCGCTACGGAA  346

seq1  TTCAGATGGAGATGTAC-AAACTGAGGGGGGAGCTGGTCACGGTGCTGGA  398
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCAGATGGAGATGTACAAAACTGAGGGGGGAGCTGGTCACGGTGCTGGA  396

seq1  TAAGTTCCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTTCATCATTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTTCATCATTT  446

seq1  ATGAGGGGGACGTCTACACCTACGAGGACGTGGACAAGAGGAGTAACAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGGACGTCTACACCTACGAGGACGTGGACAAGAGGAGTAACAGA  496

seq1  ATAGCCCACGCTCTCCTGAACCACTCCTCGCTGAAAAGGGGGGACGTTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCACGCTCTCCTGAACCACTCCTCGCTGAAAAGGGGGGACGTTGT  546

seq1  GGCTTTGTTGATGAGCAACGAGCCCGACTTCGTTCATGTGTGGTTTGGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGTTGATGAGCAACGAGCCCGACTTCGTTCATGTGTGGTTTGGCC  596

seq1  TGGCTAAACTGGGCTGCGTGGTGGCCTTCCTCAACTCCAACCTTCGCTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAAACTGGGCTGCGTGGTGGCCTTCCTCAACTCCAACCTTCGCTTC  646

seq1  GATTCCCTCCTACACTGCATCAACACCTGTGAACCCACTGCCGTGGTGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCTCCTACACTGCATCAACACCTGTGAACCCACTGCCGTGGTGGT  696

seq1  GGGCGGAGGTAGAGTATGGACTGTGGTCTGCTGTGCCCAAAGCAAACCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGAGGTAGAGTATGGACTGTGGTCTGCTGTGCCCAAAGCAAACCAA  746

seq1  CCTATTTCCTGCCCTCCCCTTTCTATCCATACTTCCTGTCTAATACTTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCCTGCCCTCCCCTTTCTATCCATACTTCCTGTCTAATACTTTG  796

seq1  AGGTAGGTGATAAGGAATGTAAGATATGCGTATGCAATAGTATTTCCATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGTGATAAGGAATGTAAGATATGCGTATGCAATAGTATTTCCATC  846

seq1  CCCACAGCCAGTGACTTAGCTCCTCCCACACCTCCTCAAGCACTTTGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCCAGTGACTTAGCTCCTCCCACACCTCCTCAAGCACTTTGCTG  896

seq1  TAGATCAGCAAATAGCAATAGAACTAAAGAATATCTCTATAGAATTTCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGCAAATAGCAATAGAACTAAAGAATATCTCTATAGAATTTCTG  946

seq1  CTTCTTGCCATTTTGGGGGAGGAGCTACTGGTACCCTCCGTCCCTGAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCCATTTTGGGGGAGGAGCTACTGGTACCCTCCGTCCCTGAAAG  996

seq1  AATTC  1003
      |||||
seq2  AATTC  1001

seq1: chr18_58612711_58613772
seq2: B6Ng01-022P22.g_68_1123

seq1  GAATTCCAATGAACAGTGAAACATCTGGAGGGATTTTAAAAATACCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGAACAGTGAAACATCTGGAGGGATTTTAAAAATACCAACT  50

seq1  CCCGAGCCATACCCAGAATTGTGGATTCAGCCTCTAGTGGAGGACAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCCATACCCAGAATTGTGGATTCAGCCTCTAGTGGAGGACAGAGA  100

seq1  GACAATTATTTCTAAAATTATCTCAGTCATTATTAAAAGTCACTAGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTATTTCTAAAATTATCTCAGTCATTATTAAAAGTCACTAGGATA  150

seq1  GCCTCCTAAAGATTCCCTCCTTTTTAATCTTTTCAAGTAAAATGCAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTAAAGATTCCCTCCTTTTTAATCTTTTCAAGTAAAATGCAACCA  200

seq1  TAAATAATTACCTGTTTTTCTTCTGAGTAAGCAAGAAGAGTTATCTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTACCTGTTTTTCTTCTGAGTAAGCAAGAAGAGTTATCTAGCA  250

seq1  TCTAGTCAGTATCTAAAGCATGGAAAGCAGGTTATACACAAAACATCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCAGTATCTAAAGCATGGAAAGCAGGTTATACACAAAACATCGAG  300

seq1  AAGGAAACTGACTCACGGTGTCAGGATTCATAGCCCTGGGCACATGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACTGACTCACGGTGTCAGGATTCATAGCCCTGGGCACATGCCCT  350

seq1  GCTCTGGCTGTAATAAATAGCATGACCAAAAGCAACTTGGGGAAAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGCTGTAATAAATAGCATGACCAAAAGCAACTTGGGGAAAAATGG  400

seq1  TTTACTTCATCTTACACTTTGCAGTCCATCACCTAGAAGCAAAAACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCATCTTACACTTTGCAGTCCATCACCTAGAAGCAAAAACAGAA  450

seq1  AGCCAGAGGCAGGAACTGAAGCAGAGACCATGGCTTCTTACTGTTTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGGCAGGAACTGAAGCAGAGACCATGGCTTCTTACTGTTTTGCC  500

seq1  CCCAGGCTCTGATTCCACTGCCTCTCTTACACAGTCCAGGGCCACCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTCTGATTCCACTGCCTCTCTTACACAGTCCAGGGCCACCTGTC  550

seq1  TAGGGACAGTACCGTCCACTCTCTGGGGTATCCTACATCAATCAGTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACAGTACCGTCCACTCTCTGGGGTATCCTACATCAATCAGTAATC  600

seq1  GAAAGAATTCCCTACAGACATGCCCAGACGTCAATCTCATGGAGACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTCCCTACAGACATGCCCAGACGTCAATCTCATGGAGACACAA  650

seq1  TACAATCCCTGCGTCCCTTTTCCCAGGCTCCTCAGGTTGACAAGTCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCCCTGCGTCCCTTTTCCCAGGCTCCTCAGGTTGACAAGTCATGC  700

seq1  TAAGCAAGATAGGTATCATAATGCAAACTCTTTCAGCACGAGGATGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAGATAGGTATCATAATGCAAACTCTTTCAGCACGAGGATGAGAG  750

seq1  AATCCAGTGGATCATCCCAGCACTGTTTTCCCCTGTGTGCAACCATTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGTGGATCATCCCAGCACTGTTTTCCCCTGTGTGCAACCATTGTC  800

seq1  TCACGGAGCTCGTGCTTCGAGATCATCTCTGCATTCTCAGGAGCTTAACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAGCTCGTGCTTCGAGATCATCTCTGCATTCTCAGGAGCTTAACG  850

seq1  CCCCTCACTGACCCACTACTAATCGATTTGTTTATGATGTCAAACTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACTGACCCACTACTAATCGATTTGTTTATGATGTCAAACTTCTA  900

seq1  GATTCTGTTCAAATTATTGTCAATTCATACTCCATCGTGCCTTGCAAGAA  950
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTTCAAATTATTGTCAATTCATACTCCATCGTGCCTTGCAAGAA  950

seq1  TTGTTTTGGACATTCCCACTTTGTATGTGACAATATGTTTAATTCTCTGA  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTTTTGGACATTCCCACTTTGTATGTGACAATATGTTTAA-TCTCTGA  999

seq1  CATAATTTTAATGTGGAATTAACTTCAGTGCTTATTGTTAACATCATGTA  1050
      | ||| ||||||| |||| ||||| || ||||||||||  || |||||||
seq2  C-TAA-TTTAATGGGGAA-TAACTCCA-TGCTTATTGT--ACCTCATGTA  1043

seq1  TA-TTGTCATGTC  1062
      || ||||||||||
seq2  TATTTGTCATGTC  1056