BAC Information

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BAC

Clone NameB6Ng01-025N13
Chromosome18 (Build37)
Map Location 45,555,066 - 45,555,596
singlet/doubletsinglet
Overlap genenone
Upstream geneDcp2, Mcc, LOC100042883, Ythdc2, LOC626309, LOC225457, LOC100042900
Downstream geneKcnn2, Trim36, LOC100042905, Pggt1b, Ccdc112, EG225468, LOC100042916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025N13.bB6Ng01-025N13.g
ACCDH857065DH857066
length6501,056
definitionDH857065|Mus musculus domesticus DNA, BAC clone: B6Ng01-025N13, 5' end.DH857066|Mus musculus domesticus DNA, BAC clone: B6Ng01-025N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaaaacctttcaaccaaaaaaaaaaaaagggggggggggct
aaatggatttagaatagaattcttttttttttaattttttattaggtatt
tagctcatttacatttccaatgctataccaaaagtcccccatacccaccc
acccgaactcccctacccacccactccccctttttggccctggcgttccc
ctgtactggggcatataaattttgcatgtccaatgggcctctctttccag
tgatggccgactaggccatcttttgatacatatgcagctagagtcaagag
caccggggtactggttagttcataatgttgttccacctatagggttgaag
atccctttagctccttgggtactttctctagctcctccattgggagccct
atgatccatccattagctgactgtgagcatccacttctgtgtttcctagg
ccccggcatagtctcacaagagacagctacatttgggtcctttcaataaa
atcttgctagtgtatgcagtggtgtcagcgtttggatgctgattatgggg
tggatccctggatatggcagtctctacatggtccatcctttcatcttcag
ctccaaactttgtctctgtaactccttccaagggtgttttgttccccact

gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtgcactttcttgaattctttatatatattggatattagtccc
ctatctgatttaggatagataaagatcctttcccaatctcttggtagtct
ttttgtcttattgacggtgtcttttaccttgcagaagctttacaatttta
ttaagtcccatttatagattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttccccagtacccatatctttgagggttttccctac
agtgtcctcaataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttaattcaaggagataggaatggatcaattcac
attcttctacatgataaccgccagttgtgccagcaccatttgctgaagat
gctgtctattttccactggatggtttttgcacccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtctgcaattctattccattgg
tctacttgtctgttgctataccagtaccatacagtttttataacaattgc
tctgcagtacagctttaggtcaggcatgatgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aattggcagattgccctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttattatatttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttatcagagacttgaagttcttatcata
cagaaaattcacttccttagttagagtcacaccaaagtattttatattat
ttgggactattgagtagggtgttatttccttactctttctcagcctgtta
ttcttgtggaaaggaaaggccagggacttgtttgagttaaatttaatcca
gctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_45555066_45555596
seq2: B6Ng01-025N13.g_596_1122 (reverse)

seq1  AGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTT-CTCTAC  49
      ||||||||||| |||| ||||||||||||||||  |||||||| || | |
seq2  AGTAGCTGGAT-TAAATTTAACTCAAACAAGTCCCTGGCCTTTCCTTTCC  49

seq1  ACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTC  99
      || |||||| |||||||||||||||  | || ||||| |||||||| |||
seq2  AC-AAGAAT-AACAGGCTGAGAAAG--AGTAAGGAAATAACACCCTACTC  95

seq1  AATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAG  149
      ||||||| ||||||||||||||||  | || |||||||||||||||||||
seq2  AATAGTCCCAAATAATATAAAATACTTTGGTGTGACTCTAACTAAGGAAG  145

seq1  TGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAA  199
      ||||   |||||||||||| ||||||||||||||| | ||||||||||||
seq2  TGAATTTTCTGTATGATAAGAACTTCAAGTCTCTG-ATAAAGAAATTAAA  194

seq1  GAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGAT  244

seq1  C-AACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGGTTCAAT  298
      | || ||  |||||||||||||||||||||||||||||||||| ||||||
seq2  CAAATATAATAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAAT  294

seq1  GCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  GCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGGGC  344

seq1  AATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTC  398
      ||| ||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  AATCTGCCAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTC  394

seq1  TTCTCAAGGATAAAAGAATCTCTGGTGGAATCACCATGCCTGACCTAAAG  448
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TTCTCAAGGATAAAAGAACCTCTGGTGGAATCATCATGCCTGACCTAAAG  444

seq1  CTTTACTACAGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAGA  498
      || |||| ||||||||||||  ||||||||| |||||||||||||||  |
seq2  CTGTACTGCAGAGCAATTGTTATAAAAACTGTATGGTACTGGTATAGCAA  494

seq1  CAGACAAGTAGACCAATGGAATAGAATTGAAGA  531
      ||||||||||||||||||||||||||||| |||
seq2  CAGACAAGTAGACCAATGGAATAGAATTGCAGA  527