BAC Information

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BAC

Clone NameB6Ng01-026M01
Chromosome18 (Build37)
Map Location 83,755,639 - 83,756,580
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026M01.bB6Ng01-026M01.g
ACCDH857696DH857697
length973946
definitionDH857696|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M01, 5' end.DH857697|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttatctctgttttccatttttaaaaattgggtgatttgg
tttgttggtgcctaacttctcgagttccttacatattttggatattagcc
ttctgttggatgtaggttggtgaagatgattttcatctgtaggctgctgt
tttgtcctattgacagtgcccttttccttacagaagcttttcagtttcat
gaggttgcatttatcaattgtcgatcttagacttgagtcatcattgttct
gttcaggaaattgtctcctgtacaatgtgttccaggctatttcccatttt
ctctcctattagattttatctggttttatgttgagttctttgatccattt
tggacttgagttttgtgcagggtgtgaaaactatggatctatttgcattc
tctacatgcagacattcagttagaccagcaccatttgttaaagatgcttt
ctttttttcattgtatggttttggcttctttgtcaaaattcaactgttca
taggtttgtgggtttatttctgggttttcaagtcaattccattggtcaat
ccgtctgtttgtataccaatgccatgcagtttttatgactattgctctgt
agtacagcttgaggttagggatggtgattcctctagtagttctcgaggat
aatacgatagtatacataagcaaccccaaaattctaccagagaactccta
cagctgataaacaccttaagcaaagtggcttgatacaaaattaactcaaa
gaaaccagtaactttcagttacactagtgtactggctatttttgtgtcaa
ctttgacacacctggagttatcacagagaaaggagcttcagttgagaaat
gcctccatgagaaacaactgtcagcattttctcaattagtgatcatgggg
aaaggccccttgtggatgggaccatctctggcctgcaatcttgtgttcta
tatgagagcagtgctgtagcaag
gaattcactgtagacagtggtatggaatgcctcgaatgatgaccctggaa
atttggcaggtcacattcagtctgtgcccagagttaacctcaaggaacac
ttcacggacattcactgttgtatcacttgctgtgggcagcatcacagttg
gaacaacctacttcctgtctgtggcatccaatgtccatgacttgggttgt
gtatagaccagaggatgagtgggaactacgatgtcactcaaatggcacca
ttgtaaaagacctagtggttccaaaagaaactcactgggctctatgttct
ggagatgaagagaatttttaaaaagcacataggtactaggtaaacaccaa
aactttgtcataaaacctactaattgagggtgtcacttttaatcacaaaa
gtatgtaacaaactgaccagtggtctacgatgcttagcttttggcaacat
ccagcctcattctatgcttatgaaaagggctaagacacctcagtgttgat
attgctatgcagatactgcagcaacaccaaaaatggtaccttaaccagtg
ttgtggagacagagcagatattgtgaatactgtcaaactttacagtacct
ataataattaaagatttaaaataatctcttgctagatggaaggagaccat
gcaacacttcctaggattcagccctgttgaccaggtttgcatgtgaaagc
attatttgtacctgaacaagtaaacttattagtaacgttagccacacctc
catatgctgttcttctcaccgcctgtattcatacatatcaaaagctaggg
aagcttgaaggtaaacacatgtgcttatccacatactaagacctgaattt
agaaccctggcatcaatgtagaaaagccagtttggctgtgggtctgtttt
gaccctaattgttggaggaggcaaaacaggaaagttcaactggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83755639_83756580
seq2: B6Ng01-026M01.g_69_1014

seq1  GAATTCACTGTAGACAGTGGTATGGAATGCCTCGAATGATGACCCTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTAGACAGTGGTATGGAATGCCTCGAATGATGACCCTGGAA  50

seq1  ATTTGGCAGGTCACATTCAGTCTGTGCCCAGAGTTAACCTCAAGGAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCAGGTCACATTCAGTCTGTGCCCAGAGTTAACCTCAAGGAACAC  100

seq1  TTCACGGACATTCACTGTTGTATCACTTGCTGTGGGCAGCATCACAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGGACATTCACTGTTGTATCACTTGCTGTGGGCAGCATCACAGTTG  150

seq1  GAACAACCTACTTCCTGTCTGTGGCATCCAATGTCCATGACTTGGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACCTACTTCCTGTCTGTGGCATCCAATGTCCATGACTTGGGTTGT  200

seq1  GTATAGACCAGAGGATGAGTGGGAACTACGATGTCACTCAAATGGCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGACCAGAGGATGAGTGGGAACTACGATGTCACTCAAATGGCACCA  250

seq1  TTGTAAAAGACCTAGTGGTTCCAAAAGAAACTCACTGGGCTCTATGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAGACCTAGTGGTTCCAAAAGAAACTCACTGGGCTCTATGTTCT  300

seq1  GGAGATGAAGAGAATTTTTAAAAAGCACATAGGTACTAGGTAAACACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAAGAGAATTTTTAAAAAGCACATAGGTACTAGGTAAACACCAA  350

seq1  AACTTTGTCATAAAACCTACTAATTGAGGGTGTCACTTTTAATCACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTCATAAAACCTACTAATTGAGGGTGTCACTTTTAATCACAAAA  400

seq1  GTATGTAACAAACTGACCAGTGGTCTACGATGCTTAGCTTTTGGCAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAACAAACTGACCAGTGGTCTACGATGCTTAGCTTTTGGCAACAT  450

seq1  CCAGCCTCATTCTATGCTTATGAAAAGGGCTAAGACACCTCAGTGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCATTCTATGCTTATGAAAAGGGCTAAGACACCTCAGTGTTGAT  500

seq1  ATTGCTATGCAGATACTGCAGCAACACCAAAAATGGTACCTTAACCAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATGCAGATACTGCAGCAACACCAAAAATGGTACCTTAACCAGTG  550

seq1  TTGTGGAGACAGAGCAGATATTGTGAATACTGTCAAACTTTACAGTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGACAGAGCAGATATTGTGAATACTGTCAAACTTTACAGTACCT  600

seq1  ATAATAATTAAAGATTTAAAATAATCTCTTGCTAGATGGAAGGAGACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTAAAGATTTAAAATAATCTCTTGCTAGATGGAAGGAGACCAT  650

seq1  GCAACACTTCCTAGGATTCAGCCCTGTTGACCAGGTTTGCATGTGAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACTTCCTAGGATTCAGCCCTGTTGACCAGGTTTGCATGTGAAAGC  700

seq1  ATTATTTGTACCTGAACAAGTAAACTTATTAGTAACGTTAGCCACACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGTACCTGAACAAGTAAACTTATTAGTAACGTTAGCCACACCTC  750

seq1  CATATGCTG-TCTTCTCACCGCCTGTATTCATACATATCAAAAGCTAGGG  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCTGTTCTTCTCACCGCCTGTATTCATACATATCAAAAGCTAGGG  800

seq1  AAGCTTGAAAGGTAAACACATGTGC-TATCCACATACAAAGACCTGAATT  848
      ||||||| ||||||||||||||||| ||||||||||| ||||||||||||
seq2  AAGCTTG-AAGGTAAACACATGTGCTTATCCACATACTAAGACCTGAATT  849

seq1  TAGAACCCTGGCATCAATGTAG-AAAGCCAGGTATGGCTGTGGGTCTG-T  896
      |||||||||||||||||||||| ||||||| || |||||||||||||| |
seq2  TAGAACCCTGGCATCAATGTAGAAAAGCCA-GTTTGGCTGTGGGTCTGTT  898

seq1  TTGACCCTAACTG-TGGAGGAGGCAGAAACAGGAAGGT--CACTGGTGC  942
      |||||||||| || ||||||||||| ||||||||| ||   ||||||||
seq2  TTGACCCTAATTGTTGGAGGAGGCA-AAACAGGAAAGTTCAACTGGTGC  946