BAC Information

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BAC

Clone NameB6Ng01-028F07
Chromosome18 (Build37)
Map Location 82,904,754 - 83,071,062
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040871, B020010K11Rik, Galr1, Mbp, EG637748, Zfp236, LOC100039563
Downstream geneZfp516, LOC100041001, 4921531P14Rik, LOC665284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028F07.bB6Ng01-028F07.g
ACCDH858836DH858837
length1,1361,022
definitionDH858836|Mus musculus domesticus DNA, BAC clone: B6Ng01-028F07, 5' end.DH858837|Mus musculus domesticus DNA, BAC clone: B6Ng01-028F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,069,900 - 83,071,062)(82,904,754 - 82,905,785)
sequence
gaattctaaaaacctaaaccgcagaactgtagtcacacaaggactgtaaa
atcttacaatcctgtatgtaaccccagcatctgacaggccaacggaggac
agtgacttcaagtctacctgagtttcacagtgagcccctgtctcaaaaat
gattaaaatagggctggctggctcagaagccaagggatctacagctccag
ggccctgttcccagcacacacgtggcatctcacaaccatctataacttca
tttccaaggaatctgacatagtctttgggtctctcccaggggcaccatgc
atgcccctggtgtacaaacatacaatgcaacaatgcttcttttttaaaag
tgtataacgaaactgcctccgtcattagtaacgtcatgctctcttgtcat
tcctgactgcagttttaacttctccctctcttgctgtccaaaggcacaga
aaagttaatggtaaaaaattaactgtgaattttgggaccttgcaatacat
ttcactgcacagcatggtttatatcctaagactactcccctaatgcccat
gtgttaaacacctagcccctgacttgttactgtggagaaccattggcagg
tccattaggaattaggtcattggtagtaccactaaggggattatggatcc
ctggtctctgtttctctctgtgtgtctgtctctctctgtctctctttcca
tctctcattcctgcttacaagttgccacgacatgagaaacttcctccacc
aagaaccctagccataatgtgccatctacagaggcccactgaccccacac
cgacaccccaaaactgtgcactaaaatcagcctttaatctttttaatttc
attatctcaagtgtctgcttacagtaacagaaaactgacatgtagattct
aaaaaagttttgttactaaactctgagagagaaaaaagaaaacactcaaa
tgtttgctaaaagatttaaatatttcagtaaaaaatagctcaggactata
gctccatgacaaatactcactactatttgttttagactatagtcagaagg
gaaatagaatgaaaaaaaaaaaaagagttggatgaaactttagtcataca
tcaaaattactcgaatgttttatttggtgacggaac
gaattcaggtcttcaggcttggcagtaaacaggtctgctcactgagccac
ctcccctgccccaggtctacttcttctagggcagcaacaggaagggaaat
gacaccagagctgcacgtgtttatgcttgtaagtcatgccaacccaatga
tgcaatccgctgtaagaaacagctgtagagacagaagcaaagccacaagg
ggcacctggaagggaaagcttccttagagcttctacctaaatgtcacagg
tggtgagtgtcacctgcatccaacactggaggggtgtggcctgtgagatc
acactttaagcaccaggaagatgaaggtgctgagtgagtcagcgctgagc
cagcagccgcctcagaacccagctgttcacctgcctgttgggctacactg
tcctcctggtaggggtggatgttccagtctgtcttctgtgatcttgtcgt
gaatcacagagggaaatctacactctaacagcggacttggtgataacccc
ccaagtctttcttagcgtcccccaagacgtgaggctaccagcatctttgc
tggttgttggaagatgctgcctcgtctgacagatgactccagggcatcaa
ggatcaataatagcagacacacagccgtgaggatggtgtgcctgggctgt
gtgcactcggaaggcactcctgtttctggtgctggtactgtttctggaaa
gttctatccagaggcctctgacagccaaatatgaagcaatacttcacacg
ccctctgttttgttggtctttgcaacctcagcttttacagaagcaaacca
atccccaggatccgcccccacccccacccccacccccaactcatctgctg
ccccttccagcactttctccacattgcaaaggaagcaagcagacctgaca
ttccaagatgctggtgtctcatcatggacccattacgtttgtgtccagat
gtggcccgtatatgttaacacctttaaagggatcaggctgcgcgtgttga
gactgaatctgatgtcctgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83069900_83071062
seq2: B6Ng01-028F07.b_47_1182 (reverse)

seq1  GTTCTGTCACCAAATAAAACATATTCCGAAGTAAATTTTTGATGTAATGA  50
      |||| |||||||||||||||  ||||   |||||  ||||||||| ||||
seq2  GTTCCGTCACCAAATAAAAC--ATTC--GAGTAA--TTTTGATGT-ATGA  43

seq1  CTAAAGTTTTTCAATCAAAACTCTTTTTTTTTTTTTTGGTTTCTATTTTT  100
      |||||||||    |||  ||||||||||||||||||    ||||| ||| 
seq2  CTAAAGTTT---CATC-CAACTCTTTTTTTTTTTTT--CATTCTA-TTTC  86

seq1  CCTTCTGACTTATAGTTCTTAAAAACAAATAGTAGGTGAGTTATTTGTCA  150
      ||||||||| ||||| |||  ||||||||||||| ||||| |||||||||
seq2  CCTTCTGAC-TATAG-TCT--AAAACAAATAGTA-GTGAG-TATTTGTCA  130

seq1  TGGAGCTATAGTCCCTGAGCTAATTTTTTTACTGAAATATTTTAAATCTT  200
      |||||||||||| |||||||||  ||||||||||||||| |||||||| |
seq2  TGGAGCTATAGT-CCTGAGCTA--TTTTTTACTGAAATA-TTTAAATC-T  175

seq1  TTTAGCAAACATTTGAGTGTTTTTCTTTTTTTCTCTCTCAGAGTTTAGTA  250
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  TTTAGCAAACATTTGAGTGTTTT--CTTTTTTCTCTCTCAGAGTTTAGTA  223

seq1  ACAAAACTTTTTTAGAATCTACATGTCAGTTTTCTGTTACTGTAAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTTTTTAGAATCTACATGTCAGTTTTCTGTTACTGTAAGCAGA  273

seq1  CACTTGAGATAATGAAATTAAAAAGATTAAAGGCTGATTTTAGTGCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGATAATGAAATTAAAAAGATTAAAGGCTGATTTTAGTGCACAG  323

seq1  TTTTGGGGTGTCGGTGTGGGGTCAGTGGGCCTCTGTAGATGGCACATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGTGTCGGTGTGGGGTCAGTGGGCCTCTGTAGATGGCACATTAT  373

seq1  GGCTAGGGTTCTTGGTGGAGGAAGTTTCTCATGTCGTGGCAACTTGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGGTTCTTGGTGGAGGAAGTTTCTCATGTCGTGGCAACTTGTAAG  423

seq1  CAGGAATGAGAGATGGAAAGAGAGACAGAGAGAGACAGACACACAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGAGAGATGGAAAGAGAGACAGAGAGAGACAGACACACAGAGAG  473

seq1  AAACAGAGACCAGGGATCCATAATCCCCTTAGTGGTACTACCAATGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGACCAGGGATCCATAATCCCCTTAGTGGTACTACCAATGACCT  523

seq1  AATTCCTAATGGACCTGCCAATGGTTCTCCACAGTAACAAGTCAGGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAATGGACCTGCCAATGGTTCTCCACAGTAACAAGTCAGGGGCT  573

seq1  AGGTGTTTAACACATGGGCATTAGGGGAGTAGTCTTAGGATATAAACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTAACACATGGGCATTAGGGGAGTAGTCTTAGGATATAAACCAT  623

seq1  GCTGTGCAGTGAAATGTATTGCAAGGTCCCAAAATTCACAGTTAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCAGTGAAATGTATTGCAAGGTCCCAAAATTCACAGTTAATTTTT  673

seq1  TACCATTAACTTTTCTGTGCCTTTGGACAGCAAGAGAGGGAGAAGTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTAACTTTTCTGTGCCTTTGGACAGCAAGAGAGGGAGAAGTTAAA  723

seq1  ACTGCAGTCAGGAATGACAAGAGAGCATGACGTTACTAATGACGGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTCAGGAATGACAAGAGAGCATGACGTTACTAATGACGGAGGCA  773

seq1  GTTTCGTTATACACTTTTAAAAAAGAAGCATTGTTGCATTGTATGTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGTTATACACTTTTAAAAAAGAAGCATTGTTGCATTGTATGTTTGT  823

seq1  ACACCAGGGGCATGCATGGTGCCCCTGGGAGAGACCCAAAGACTATGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGGGGCATGCATGGTGCCCCTGGGAGAGACCCAAAGACTATGTCA  873

seq1  GATTCCTTGGAAATGAAGTTATAGATGGTTGTGAGATGCCACGTGTGTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTGGAAATGAAGTTATAGATGGTTGTGAGATGCCACGTGTGTGC  923

seq1  TGGGAACAGGGCCCTGGAGCTGTAGATCCCTTGGCTTCTGAGCCAGCCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAGGGCCCTGGAGCTGTAGATCCCTTGGCTTCTGAGCCAGCCAG  973

seq1  CCCTATTTTAATCATTTTTGAGACAGGGGCTCACTGTGAAACTCAGGTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTTTAATCATTTTTGAGACAGGGGCTCACTGTGAAACTCAGGTAG  1023

seq1  ACTTGAAGTCACTGTCCTCCGTTGGCCTGTCAGATGCTGGGGTTACATAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGTCACTGTCCTCCGTTGGCCTGTCAGATGCTGGGGTTACATAC  1073

seq1  AGGATTGTAAGATTTTACAGTCCTTGTGTGACTACAGTTCTGCGGTTTAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTAAGATTTTACAGTCCTTGTGTGACTACAGTTCTGCGGTTTAG  1123

seq1  GTTTTTAGAATTC  1163
      |||||||||||||
seq2  GTTTTTAGAATTC  1136

seq1: chr18_82904754_82905785
seq2: B6Ng01-028F07.g_66_1087

seq1  GAATTCAGGTCTTCAGGCTTGGCAGTAAACAGGTCTGCTCACTGAGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTTCAGGCTTGGCAGTAAACAGGTCTGCTCACTGAGCCAC  50

seq1  CTCCCCTGCCCCAGGTCTACTTCTTCTAGGGCAGCAACAGGAAGGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGCCCCAGGTCTACTTCTTCTAGGGCAGCAACAGGAAGGGAAAT  100

seq1  GACACCAGAGCTGCACGTGTTTATGCTTGTAAGTCATGCCAACCCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGAGCTGCACGTGTTTATGCTTGTAAGTCATGCCAACCCAATGA  150

seq1  TGCAATCCGCTGTAAGAAACAGCTGTAGAGACAGAAGCAAAGCCACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCGCTGTAAGAAACAGCTGTAGAGACAGAAGCAAAGCCACAAGG  200

seq1  GGCACCTGGAAGGGAAAGCTTCCTTAGAGCTTCTACCTAAATGTCACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTGGAAGGGAAAGCTTCCTTAGAGCTTCTACCTAAATGTCACAGG  250

seq1  TGGTGAGTGTCACCTGCATCCAACACTGGAGGGGTGTGGCCTGTGAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGTGTCACCTGCATCCAACACTGGAGGGGTGTGGCCTGTGAGATC  300

seq1  ACACTTTAAGCACCAGGAAGATGAAGGTGCTGAGTGAGTCAGCGCTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAAGCACCAGGAAGATGAAGGTGCTGAGTGAGTCAGCGCTGAGC  350

seq1  CAGCAGCCGCCTCAGAACCCAGCTGTTCACCTGCCTGTTGGGCTACACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCGCCTCAGAACCCAGCTGTTCACCTGCCTGTTGGGCTACACTG  400

seq1  TCCTCCTGGTAGGGGTGGATGTTCCAGTCTGTCTTCTGTGATCTTGTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGGTAGGGGTGGATGTTCCAGTCTGTCTTCTGTGATCTTGTCGT  450

seq1  GAATCACAGAGGGAAATCTACACTCTAACAGCGGACTTGGTGATAACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACAGAGGGAAATCTACACTCTAACAGCGGACTTGGTGATAACCCC  500

seq1  CCAAGTCTTTCTTAGCGTCCCCCAAGACGTGAGGCTACCAGCATCTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTTTCTTAGCGTCCCCCAAGACGTGAGGCTACCAGCATCTTTGC  550

seq1  TGGTTGTTGGAAGATGCTGCCTCGTCTGACAGATGACTCCAGGGCATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTGGAAGATGCTGCCTCGTCTGACAGATGACTCCAGGGCATCAA  600

seq1  GGATCAATAATAGCAGACACACAGCCGTGAGGATGGTGTGCCTGGGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAATAATAGCAGACACACAGCCGTGAGGATGGTGTGCCTGGGCTGT  650

seq1  GTGCACTCGGAAGGCACTCCTGTTTCTGGTGCTGGTACTGTTTCTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTCGGAAGGCACTCCTGTTTCTGGTGCTGGTACTGTTTCTGGAAA  700

seq1  GTTCTATCCAGAGGCCTCTGACAGCCAAATATGAAGCAATACTTCACACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATCCAGAGGCCTCTGACAGCCAAATATGAAGCAATACTTCACACG  750

seq1  CCCTCTGTTTTGTTGGTCTTTGCAACCTCAGCTTTTACAGAAGCAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTTTTGTTGGTCTTTGCAACCTCAGCTTTTACAGAAGCAAACCA  800

seq1  ATCCCCAGGATCCGCCCCCACCCCCACCCCCACCCCCAACTCATCTGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGGATCCGCCCCCACCCCCACCCCCACCCCCAACTCATCTGCTG  850

seq1  CCCCTTCCAGCACTTTCTCCACATTGCAAAGGAAGCAAGCAGACCTGACC  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCCCTTCCAGCACTTTCTCCACATTGCAAAGGAAGCAAGCAGACCTGA-C  899

seq1  ATTCCAAGATGCTGGTGTCTCATCATGGAACCCATTACGTTTGTGTCCAA  950
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  ATTCCAAGATGCTGGTGTCTCATCATGG-ACCCATTACGTTTGTGTCC-A  947

seq1  GATGTGGCCCGTATATGGTTAACACCTTTAAAAAGTGATTCAGGCCTGCG  1000
      |||||||||||||||| ||||||||||||  |||| || ||||| |||||
seq2  GATGTGGCCCGTATAT-GTTAACACCTTT--AAAGGGA-TCAGG-CTGCG  992

seq1  CGTGCTGAGACTGGATCTGAGTGTCCGTGACA  1032
      |||| |||||||| |||||| ||||| |||||
seq2  CGTGTTGAGACTGAATCTGA-TGTCC-TGACA  1022