BAC Information

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BAC

Clone NameB6Ng01-029F14
Chromosome18 (Build37)
Map Location 60,118,032 - 60,249,869
singlet/doubletdoublet
Overlap genenone
Upstream geneAdamts19, A730017C20Rik, 4833446K15Rik, LOC667549
Downstream geneEG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo, LOC100042675, Ndst1, Rps14, LOC667619, Cd74, Tcof1, LOC100042699, Arsi, Camk2a, Slc6a7, Cdx1, Pdgfrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029F14.bB6Ng01-029F14.g
ACCDH859572DH859573
length1,1391,064
definitionDH859572|Mus musculus domesticus DNA, BAC clone: B6Ng01-029F14, 5' end.DH859573|Mus musculus domesticus DNA, BAC clone: B6Ng01-029F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,248,716 - 60,249,869)(60,118,032 - 60,119,093)
sequence
gaattcagtggatcttcacagtttaaaactcagcaaccacttaggtaaaa
caaaaaatttatgaccttttaaattttcttctttctttgtttctctcttt
ctttttcttttttttcttttttattatatattttctttatttacatttca
aatgctatctcaaaacttccctgtacccttccccagccctgcttccctat
ccacccactcccacttcttggccctggcattcccctgtgctggggcatat
aaagtttgcaagaccaaggggcctctcttcccaatcacatgcatgcatgt
gcaaatgtgcatgtacataagcacatgcactatttatactaatgtgaata
ttttaaaaagttaaaatatagtgttttataatttcatacaacattataat
gtatatgataagcacatggaaactagagagatgattctgtggttaacagt
acttgctgcttttccataggacacagatttcattcttggtattaacttgg
cactcaacaccagtctgtacttccaactgcagtgtttctggcctctgggg
gaactgtagttatgtactgcacagacatgtacaagacactcacaaatata
aaataaaataactaaaaatatgtaaagttaaaaagctagtggattttttc
acctgattattattttttattgaaaatacatttcatacaatatattctaa
tcacagttttccctcccttgtttcctctcagagctcccaccttcccacct
aacaatgccacttctttctctctctctctttagaaaacaattaagacaat
aagcaaagaatcaagcaaaacagaataaaacaagcaaacattaaaaaaat
caaacaacaataaagaagtgtggagaaattctgccttcagagatgaatga
agatgacatataagggacactgagatttagagagtcacattcttttacta
aggttttcactgacagattcacagagacttacttgtttctttcctagtgt
agcttcatgttcagagggagcaggttctagaaggtagacacgatagatct
tttggtcattctggtgagaatagtggagcataaatcaataaactggaatg
gtctgagcaccgaggaggacaactagaataaaacaatcc
gaattcattttggatattacagaattaatactgattaattcttaagggtg
ttagtagaagtatgaatatcagtcagtttttaatggtgtctaaccccaga
tatctcagtacctttcaaaacagtaaggtttggtgttttcttgctttctg
aataactattttatgttggattttcatcgaaacatcttcaaggtatttta
tggtaaagtagggggaaagcaggaatagaaaactgtgtttatagtaattg
tatgcaataaggaaatatgaggggcactgctctccaccaaatacagtttg
cagggttgagtgaccattgacaatgaggtaaatgcagatacttgagatta
ttcaaaatgctttaacatttcctcaaaccctttattatattttttaaatt
tactggtttgcatatgattggaatttttatcttaaaactagtcattgcct
acaaaaagtttgagaagtcctgatatataatcaattaatataaaaggaat
atatttacaaatataatttcaagaaatatttacaagaaattggtaaatat
cattggctccctccccccccccccgcccccaattgtctagcacatgccct
gcctgcctgaaaggaatgatttgttaataacagtccttaatgtcaagact
aaagtagtcaaggctgaaatgctcagtatgaaactgagtaacatgtagaa
aggtcccacaaagttgctttttatgaggctagattaattatcaggatcag
aagcagactccatttaagataggaaggactggaaactgcactatccaaga
aaagagaaaattgagtcaaaattgtggcatcccttttttcattgggcagt
ggagagatagaaatagtggcatttgtctccttggcttcctttcatctctg
aagcagcaggatctatgggtcaaggacagttgtatgaatgctctgtgtta
ggatgaaacttatgatgcatggtcttgttgtgacaaggaatatcccacag
tgggaggtataaggctacaaatcatctaatttcattgaagccttaactgt
gtcagccatggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_60248716_60249869
seq2: B6Ng01-029F14.b_42_1180 (reverse)

seq1  GGATTGTTTTTATCTAGGTTGTCCTCCTCGGGTGCTTCAGACCATTTTCA  50
      ||||||||||  |||| |||||||||||| ||||| |||||||| || ||
seq2  GGATTGTTTTATTCTA-GTTGTCCTCCTC-GGTGC-TCAGACCA-TTCCA  46

seq1  GTTTATTGGTTTTATGGCTCAACTATTCTCAACCAGAATGACCATAAGAT  100
      ||||||| | ||||| |||| ||||||||| ||||||||||||| |||||
seq2  GTTTATT-GATTTAT-GCTCCACTATTCTC-ACCAGAATGACCAAAAGAT  93

seq1  TCTTATCGTTGTCTTACCTTCTAGAACCCTGCTCCCTCTTGGACATGGAG  150
         ||||| |||| |||||||||||| ||||||||||| || ||||| ||
seq2  --CTATCG-TGTC-TACCTTCTAGAA-CCTGCTCCCTC-TGAACATGAAG  137

seq1  CTACACTAGGAAAGAAACAAGTAGGTCTCTGTTGAATCTGTCAGTGGAAA  200
      ||||||||||||||||||||||| ||||||| |||||||||||||| |||
seq2  CTACACTAGGAAAGAAACAAGTAAGTCTCTG-TGAATCTGTCAGTGAAAA  186

seq1  CCTTAGT-AAAGAATGTGACTCTCTAAATTCTCAGTGTCCCCTTATATGT  249
      ||||||| |||||||||||||||||||| ||||||||| |||||||||||
seq2  CCTTAGTAAAAGAATGTGACTCTCTAAA-TCTCAGTGT-CCCTTATATGT  234

seq1  CATCTTCATTCATCTCTGAGGGCAGAATTTCTCCACACTTCTTTATTGTT  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATCTTCATTCATCTCTGAAGGCAGAATTTCTCCACACTTCTTTATTGTT  284

seq1  GTTTGATTTTTTTAATGTTTGCTTGTTTTATTCTGTTTTGCTTGATTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTTTTTTAATGTTTGCTTGTTTTATTCTGTTTTGCTTGATTCTT  334

seq1  TGCTTATTGTCTTAATTGTTTTCTAAAGAGAGAGAGAGAAAGAAGTGGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTGTCTTAATTGTTTTCTAAAGAGAGAGAGAGAAAGAAGTGGCA  384

seq1  TTGTTAGGTGGGAAGGTGGGAGCTCTGAGAGGAAACAAGGGAGGGAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGTGGGAAGGTGGGAGCTCTGAGAGGAAACAAGGGAGGGAAAAC  434

seq1  TGTGATTAGAATATATTGTATGAAATGTATTTTCAATAAAAAATAATAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTAGAATATATTGTATGAAATGTATTTTCAATAAAAAATAATAAT  484

seq1  CAGGTGAAAAAATCCACTAGCTTTTTAACTTTACATATTTTTAGTTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAAAAAATCCACTAGCTTTTTAACTTTACATATTTTTAGTTATTT  534

seq1  TATTTTATATTTGTGAGTGTCTTGTACATGTCTGTGCAGTACATAACTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATTTGTGAGTGTCTTGTACATGTCTGTGCAGTACATAACTAC  584

seq1  AGTTCCCCCAGAGGCCAGAAACACTGCAGTTGGAAGTACAGACTGGTGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCCCAGAGGCCAGAAACACTGCAGTTGGAAGTACAGACTGGTGTT  634

seq1  GAGTGCCAAGTTAATACCAAGAATGAAATCTGTGTCCTATGGAAAAGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCAAGTTAATACCAAGAATGAAATCTGTGTCCTATGGAAAAGCAG  684

seq1  CAAGTACTGTTAACCACAGAATCATCTCTCTAGTTTCCATGTGCTTATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTGTTAACCACAGAATCATCTCTCTAGTTTCCATGTGCTTATCA  734

seq1  TATACATTATAATGTTGTATGAAATTATAAAACACTATATTTTAACTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTATAATGTTGTATGAAATTATAAAACACTATATTTTAACTTTT  784

seq1  TAAAATATTCACATTAGTATAAATAGTGCATGTGCTTATGTACATGCACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTCACATTAGTATAAATAGTGCATGTGCTTATGTACATGCACA  834

seq1  TTTGCACATGCATGCATGTGATTGGGAAGAGAGGCCCCTTGGTCTTGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACATGCATGCATGTGATTGGGAAGAGAGGCCCCTTGGTCTTGCAA  884

seq1  ACTTTATATGCCCCAGCACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGCCCCAGCACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTG  934

seq1  GGTGGATAGGGAAGCAGGGCTGGGGAAGGGTACAGGGAAGTTTTGAGATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATAGGGAAGCAGGGCTGGGGAAGGGTACAGGGAAGTTTTGAGATA  984

seq1  GCATTTGAAATGTAAATAAAGAAAATATATAATAAAAAAGAAAAAAAAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGAAATGTAAATAAAGAAAATATATAATAAAAAAGAAAAAAAAGA  1034

seq1  AAAAGAAAGAGAGAAACAAAGAAAGAAGAAAATTTAAAAGGTCATAAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAGAGAAACAAAGAAAGAAGAAAATTTAAAAGGTCATAAATT  1084

seq1  TTTTGTTTTACCTAAGTGGTTGCTGAGTTTTAAACTGTGAAGATCCACTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTACCTAAGTGGTTGCTGAGTTTTAAACTGTGAAGATCCACTG  1134

seq1  AATTC  1154
      |||||
seq2  AATTC  1139

seq1: chr18_60118032_60119093
seq2: B6Ng01-029F14.g_65_1128

seq1  GAATTCATTTTGGATATTACAGAATTAATACTGATTAATTCTTAAGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTGGATATTACAGAATTAATACTGATTAATTCTTAAGGGTG  50

seq1  TTAGTAGAAGTATGAATATCAGTCAGTTTTTAATGGTGTCTAACCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGAAGTATGAATATCAGTCAGTTTTTAATGGTGTCTAACCCCAGA  100

seq1  TATCTCAGTACCTTTCAAAACAGTAAGGTTTGGTGTTTTCTTGCTTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGTACCTTTCAAAACAGTAAGGTTTGGTGTTTTCTTGCTTTCTG  150

seq1  AATAACTATTTTATGTTGGATTTTCATCGAAACATCTTCAAGGTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTATTTTATGTTGGATTTTCATCGAAACATCTTCAAGGTATTTTA  200

seq1  TGGTAAAGTAGGGGGAAAGCAGGAATAGAAAACTGTGTTTATAGTAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGTAGGGGGAAAGCAGGAATAGAAAACTGTGTTTATAGTAATTG  250

seq1  TATGCAATAAGGAAATATGAGGGGCACTGCTCTCCACCAAATACAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATAAGGAAATATGAGGGGCACTGCTCTCCACCAAATACAGTTTG  300

seq1  CAGGGTTGAGTGACCATTGACAATGAGGTAAATGCAGATACTTGAGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGAGTGACCATTGACAATGAGGTAAATGCAGATACTTGAGATTA  350

seq1  TTCAAAATGCTTTAACATTTCCTCAAACCCTTTATTATATTTTTTAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATGCTTTAACATTTCCTCAAACCCTTTATTATATTTTTTAAATT  400

seq1  TACTGGTTTGCATATGATTGGAATTTTTATCTTAAAACTAGTCATTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTTGCATATGATTGGAATTTTTATCTTAAAACTAGTCATTGCCT  450

seq1  ACAAAAAGTTTGAGAAGTCCTGATATATAATCAATTAATATAAAAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGTTTGAGAAGTCCTGATATATAATCAATTAATATAAAAGGAAT  500

seq1  ATATTTACAAATATAATTTCAAGAAATATTTACAAGAAATTGGTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAAATATAATTTCAAGAAATATTTACAAGAAATTGGTAAATAT  550

seq1  CATTGGCTCCCTCCCCCCCCCCCCCGCCCCCAATTGTCTAGCACATGCCC  600
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTCCCT-CCCCCCCCCCCCGCCCCCAATTGTCTAGCACATGCCC  599

seq1  TGCCTGCCTGAAAGGAATGATTTGTTAATAACAGTCCTTAATGTCAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTGAAAGGAATGATTTGTTAATAACAGTCCTTAATGTCAAGAC  649

seq1  TAAAGTAGTCAAGGCTGAAATGCTCAGTATGAAACTGAGTAACATGTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGTCAAGGCTGAAATGCTCAGTATGAAACTGAGTAACATGTAGA  699

seq1  AAGGTCCCACAAAGTTGCTTTTTATGAGGCTAGATTAATTATCAGGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCCACAAAGTTGCTTTTTATGAGGCTAGATTAATTATCAGGATCA  749

seq1  GAAGCAGACTCCATTTAAGATAGGAAGGACTGGAAACTGCACTATCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGCAGACTCCATTTAAGATAGGAAGGACTGGAAACTGCACTATCCAA-  798

seq1  GAAAAGAGAAAATTGAGCCAAAATTGTGGCATCCC-TTTCTCATTGGGCA  849
      ||||||||||||||||| ||||||||||||||||| ||| ||||||||||
seq2  GAAAAGAGAAAATTGAGTCAAAATTGTGGCATCCCTTTTTTCATTGGGCA  848

seq1  GTGGAGAGATAGAAATAGTGGCATATGTCTCCTTGGC-TCCCTACAGCTC  898
      |||||||||||||||||||||||| |||||||||||| ||| | || |||
seq2  GTGGAGAGATAGAAATAGTGGCATTTGTCTCCTTGGCTTCCTTTCATCTC  898

seq1  TGAAGCAGCAGGACCTAT-GGTCAA-GACAGTTGTATGAATGC-CTGTG-  944
      ||||||||||||| |||| |||||| ||||||||||||||||| ||||| 
seq2  TGAAGCAGCAGGATCTATGGGTCAAGGACAGTTGTATGAATGCTCTGTGT  948

seq1  TAGGATGTAAACTATGATGCATGGTCTTGTTTGTGACAGGGATATTCCCA  994
      ||||||| ||  ||||||||||||||||| |||||||| |||   |||||
seq2  TAGGATGAAACTTATGATGCATGGTCTTG-TTGTGACAAGGAATATCCCA  997

seq1  CAGTGGAGTGTAGTAAGGCTACAATACATCT-ATCTCATTGTAGCCTTAA  1043
      ||||||   ||| |||||||||||  ||||| || |||||| ||||||||
seq2  CAGTGGGAGGTA-TAAGGCTACAAATCATCTAATTTCATTGAAGCCTTAA  1046

seq1  CTGTGCCAGCACATGGTGA  1062
      ||||| |||| ||||||||
seq2  CTGTGTCAGC-CATGGTGA  1064