BAC Information

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BAC

Clone NameB6Ng01-029I23
Chromosome18 (Build37)
Map Location 83,681,473 - 83,682,486
singlet/doubletsinglet
Overlap genenone
Upstream geneMbp, EG637748, Zfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029I23.bB6Ng01-029I23.g
ACCDH859728DH859729
length1,0431,148
definitionDH859728|Mus musculus domesticus DNA, BAC clone: B6Ng01-029I23, 5' end.DH859729|Mus musculus domesticus DNA, BAC clone: B6Ng01-029I23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccaacggtgagcagcttatatgtgttgtgttgcttttcctgt
tgctgtgataaaatgcttggcaaaggtgaattcaagaggaagggttccat
tcttactccatctggacggtacagcccatcactgtggggagcacagtagt
gaggctgcaaagctctgatcccacagtcaggggcagagtgaggaaaaagg
ctggggctcagcctgattggtctttcttgtgtagttcatgaccccgaccg
ttgaaactatgctctctacgtttaggggagctcctcccctcaatctactt
aatctagagaatgtctcaccatatattacacactcatatgctagtctctt
tggtgattctagatcctatcaacttgataatcaatattaaccatcacatg
aaaaatcagtagggatacacacactaaaataaagataaaaacaactagtg
gaaagcaatacaaacccagaaatggtagagttagacagcgctaagtgctt
attatagctgtgttgtacatagtaaagtttttctgtaaatttttttctta
attcttgagattataatataattacagtattcaccttccttttcatccat
ttgaaccatcccatatatataccatgtgtgtgtgtgcgtgtgtgtgtgtg
tgtatctttgctgtttttcaaattcatgacctttttttaaacattaatgt
ggatacttgcctatatggtatgtatatatccaaaaaatacacaaatgcac
ccatctcagttagcataatgttgtttgtctattttaagggtaaactatgg
ggttggataaccaattggtgtgctctttcctggggaagacaatttctccc
acactccgcaatcttagttgcctgcagttctttgtgtaggattgaggcct
cataggctttctcctgcctgtgttgtatgtttgttgacattcttgttcag
ctcatatttagacagtcctgttggtgaggggttatgggtgtatcttgtga
ataaaactaagaaatataaatattcagccaacgtcccaattct
gaattctcacctgagtaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagaacaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcatccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggagaatccagcaatacctctcctgggc
atatatcctgaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataataaccagaagctggaaacaacccagat
gcccctcaacagaggaatggatactaaaaaatgtggtacatatacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaataacaa
aaaactcacacaaatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagagacaatttgctaaacacatgaaactcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacacagtttggaactgagacga
aaggatggaccatctagagactgccatatcctgggatccatcccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacctagatatagctgtctcatgtagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctatggatggatcacagggccctcaat
ggagagctagagaagtactcaaggagctaagagatctgcaaccctatagg
tgaacaacattatgaactaaccagtacttactgctagcatcaaagatggc
taatcggcatcagtggaaagaaagccattgtcatgcaactataatgctct
gttcagggagacgcccgggccaaaagtgcgtatgcgtgatatgagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83681473_83682486
seq2: B6Ng01-029I23.b_76_1091 (reverse)

seq1  AGAATTGGGAAGTTGGCTGGAATA-TTATATTTCTTAGTTATA-TCACAA  48
      |||||||||| ||||||| ||||| ||||||||||||||| || ||||||
seq2  AGAATTGGGACGTTGGCT-GAATATTTATATTTCTTAGTTTTATTCACAA  49

seq1  GATACATCCATAAACCCTCACCAACAGGACTGTCTAAATATGAGCTGAAC  98
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  GATACACCCATAACCCCTCACCAACAGGACTGTCTAAATATGAGCTGAAC  99

seq1  AAGAATGTCAACAAACATACAACACAGGCAGGAGAAAGCCTATGAGGCCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTCAACAAACATACAACACAGGCAGGAGAAAGCCTATGAGGCCT  149

seq1  CAATCCTACACAAAGAACTGCAGGCAACTAAGATTGCGGAGTGTGGGAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTACACAAAGAACTGCAGGCAACTAAGATTGCGGAGTGTGGGAGA  199

seq1  AATTGTCTTCCCCAGGAAAGAGCACACCAATTGGTTATCCAACCCCATAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTCCCCAGGAAAGAGCACACCAATTGGTTATCCAACCCCATAG  249

seq1  TTTACCCTTAAAATAGACAAACAACATTATGCTAACTGAGATGGGTGCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCTTAAAATAGACAAACAACATTATGCTAACTGAGATGGGTGCAT  299

seq1  TTGTGTA-TTTTTGGATATATACATACCATATAGGCAAGTATCCACATTA  347
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTTTTTGGATATATACATACCATATAGGCAAGTATCCACATTA  349

seq1  ATGTTTAAAAAAAGGTCATGAATTTGAAAAACAGCAAAGATACACACACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAAAAAGGTCATGAATTTGAAAAACAGCAAAGATACACACACA  399

seq1  CACACACGCACACACACACATGGTATATATATGGGATGGTTCAAATGGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGCACACACACACATGGTATATATATGGGATGGTTCAAATGGAT  449

seq1  GAAAAGGAAGGTGAATACTGTAATTATATTATAATCTCAAGAATTAAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAGGTGAATACTGTAATTATATTATAATCTCAAGAATTAAGAA  499

seq1  AAAAATTTACAGAAAAACTTTACTATGTACAACACAGCTATAATAAGCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTACAGAAAAACTTTACTATGTACAACACAGCTATAATAAGCAC  549

seq1  TTAGCGCTGTCTAACTCTACCATTTCTGGGTTTGTATTGCTTTCCACTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGCTGTCTAACTCTACCATTTCTGGGTTTGTATTGCTTTCCACTAG  599

seq1  TTGTTTTTATCTTTATTTTAGTGTGTGTATCCCTACTGATTTTTCATGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTATCTTTATTTTAGTGTGTGTATCCCTACTGATTTTTCATGTG  649

seq1  ATGGTTAATATTGATTATCAAGTTGATAGGATCTAGAATCACCAAAGAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAATATTGATTATCAAGTTGATAGGATCTAGAATCACCAAAGAGA  699

seq1  CTAGCATATGAGTGTGTAATATATGGTGAGACATTCTCTAGATTAAGTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATATGAGTGTGTAATATATGGTGAGACATTCTCTAGATTAAGTAG  749

seq1  ATTGAGGGGAGGAGCTCCCCTAAACGTAGAGAGCATAGTTTCAACGGTCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGGGAGGAGCTCCCCTAAACGTAGAGAGCATAGTTTCAACGGTCG  799

seq1  GGGTCATGAACTACACAAGAAAGACCAATCAGGCTGAGCCCCAGCCTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATGAACTACACAAGAAAGACCAATCAGGCTGAGCCCCAGCCTTTT  849

seq1  TCCTCACTCTGCCCCTGACTGTGGGATCAGAGCTTTGCAGCCTCACTACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTCTGCCCCTGACTGTGGGATCAGAGCTTTGCAGCCTCACTACT  899

seq1  GTGCTCCCCACAGTGATGGGCTGTACCGTCCAGATGGAGTAAGAATGGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCCCACAGTGATGGGCTGTACCGTCCAGATGGAGTAAGAATGGAA  949

seq1  CCCTTCCTCTTGAATTCACCTTTGCCAAGCATTTTATCACAGCAACAGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTCTTGAATTCACCTTTGCCAAGCATTTTATCACAGCAACAGGA  999

seq1  AAAGCAACACAACACAT  1014
      |||||||||||||||||
seq2  AAAGCAACACAACACAT  1016