BAC Information

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BAC

Clone NameB6Ng01-030C12
Chromosome18 (Build37)
Map Location 63,864,527 - 63,981,422
singlet/doubletdoublet
Overlap geneWdr7
Upstream gene2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030C12.bB6Ng01-030C12.g
ACCDH860144DH860145
length1,1011,069
definitionDH860144|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C12, 5' end.DH860145|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,980,277 - 63,981,422)(63,864,527 - 63,865,621)
sequence
gaattccaaaagacaactacaacaattagtgttagagaataaaagataag
acttggatcattgttactaccaacgtacctaccttaaagcctctttctga
aaagactctacaaactccaccccagtctcctccctctgacacattctatg
ttcctggcctattctcacatgaactccccctcccatcctcctccccacct
ctgcctgcctgccacccccctctctcatgtgtgtctctgtgtatgtatgt
gtatgtatgtgtaagtatacccatacaagctacattgcccatatggcaga
gaatatataatatttgtctttctgagtctacttaaatttattaaatttat
tatcacttaatataatttctaggtccatccatttgttggagaatttcatc
ttatttccagtttaataaaattccactgggttactctggagtaacaaaga
cctggtgctgacatgcactatgagttgaggttctggtgaggacctcgtgg
taagtggtatataaaatcataacagtaagagtatggaaagaaagattaaa
tgatgatacttgaagacagaacaagcatggggtcccataagcactacctc
aatcactcccagaagacatcagcaataactgaccaacctcctgctgccct
cacctttgaaaggctcctccatctctcaatgctgccacactggagataaa
gctcttatgtatgagtcattaggaggaaagtatatcccaactaaactata
tctcttatacaaaattaactcacatcaattatggacttaaacttaaaata
taaaacaattgtcgggcgtggtggcgcatgcctttatcccagcacttggg
aggcagaggcagggagatttctgagttctaggccagcctgttctacagag
tgagttccaggacagccaggatatacagagaaaccctgtcttgaaacaaa
caaacaaacaacaaagacaaacaaaactaaaataacattagatttttatt
aaaaaaaatcatgatcctagtagactgatataaaagcataatccaatgag
atttgactagctggctcatcaggaataaacaaatttgctctgcaaaccta
t
gaattctggtgttgggaggcatccagttcagttcagaagagatggattaa
tattatttctacctgtccttccacagcttaggaatgaagctccgggtttg
tacctaaatactgcacacacacacacaccacaccacaccacactttaact
gtccttccaggtcacagaaagcatctaaaacaagacctctaaggaggttt
ctaagacacactgtgaaaagaactataagaatcagatctgagaaggcagt
ttaatgttcattttgtgtgtgtgtgctcttccatctatatttgcaatctt
tctctatcctgacctttgtcccaggaagatgatgttcatggcctgcatca
agttccctccatagagcttattggatatcagaaaatgatgagatctagat
acactattccttcttgctctgttgccacaggttacgacaccgccagagtt
tgcagcttaggccataccattttctaattcatgcccttcactttccttgc
ctcatcatagctaggaattggtatcactcctggctgttaacagtacccag
gtaccatgtgagaaccactggcctggacacccggcctcctgcgtggacac
ctggcctgctgataggcacctgtgcaaatgtgcctaggtgagagaataat
gagctgggcatctcccattcccactcccattcccactcccattcccattc
gaggctgtctggtaactagagtgtcgacaggtagctataggacaaggagg
ggcttggacagtgtgattccttaaagggcttcttatgcttctagaatgaa
ccactcatagctacttaagcacgtacaccattggtgagccttaatactat
agctgatcagccacactcaaagacttcactttctaatgtaaatagaggtc
tttagcttagaaatcattgctatttctcttccctgtacacatccccgagc
taaatgtatgctagactcagtccctcaagtaatgttttctatttgccatt
tagtgctatatgtcactttttttttaagcaagatcatcgtttttaactct
aactttcagggaaaggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63980277_63981422
seq2: B6Ng01-030C12.b_44_1144 (reverse)

seq1  ATAGGGTTTTTGCAGAGCAAAATTTGTTTTATTCCTGATGAGGCCCAGCT  50
      |||||   |||||||||| ||||||| |||||||||||||||  ||||||
seq2  ATAGG---TTTGCAGAGC-AAATTTG-TTTATTCCTGATGAG--CCAGCT  43

seq1  AGTCAATATTTCTTCATGTGGATTATGCTTTTATTATCAAGTCTAACCTT  100
      |||||| || || |    ||||||||||||||| |||| ||||||  || 
seq2  AGTCAA-ATCTCAT----TGGATTATGCTTTTA-TATC-AGTCTA--CT-  83

seq1  AGGGATCAATGATTTTTTTTTTAATTAAAAAAATTCTAATTGTTTTATTT  150
        ||||| ||||||||||      |||| |||| |||||      | || 
seq2  -AGGATC-ATGATTTTTT------TTAATAAAAATCTAA------TGTTA  119

seq1  TTTTGGTTTTTTGTTTTTGTCTTTTGTTTTGTTTTGTTTTGTTTTGTTTT  200
      |||| ||||    | ||||||||   | ||||||   ||||||   | ||
seq2  TTTTAGTTT----TGTTTGTCTT---TGTTGTTT--GTTTGTT---TGTT  157

seq1  TCAAGACAGGGTTTCTCTGTATATCCCTGGCTGTCCTGGAACTCACTCTG  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAAGACAGGGTTTCTCTGTATAT-CCTGGCTGTCCTGGAACTCACTCTG  206

seq1  TAGAACAGGCTGGCCTAGAACTCAGAAATCTCCCTGCCTCTGCCTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAGGCTGGCCTAGAACTCAGAAATCTCCCTGCCTCTGCCTCCCAA  256

seq1  GTGCTGGGATTAAAGGCATGCGCCACCACGCCCGACAATTGTTTTATATT  350
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGA-TAAAGGCATGCGCCACCACGCCCGACAATTGTTTTATATT  305

seq1  TTAAGTTTAAGTCCATAATTGATGTGAGTTAATTTTGTATAAGAGATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTAAGTCCATAATTGATGTGAGTTAATTTTGTATAAGAGATATA  355

seq1  GTTTAGTTGGGATATACTTTCCTCCTAATGACTCATACATAAGAGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTTGGGATATACTTTCCTCCTAATGACTCATACATAAGAGCTTTA  405

seq1  TCTCCAGTGTGGCAGCATTGAGAGATGGAGGAGCCTTTCAAAGGTGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGTGTGGCAGCATTGAGAGATGGAGGAGCCTTTCAAAGGTGAGGG  455

seq1  CAGCAGGAGGTTGGTCAGTTATTGCTGATGTCTTCTGGGAGTGATTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGAGGTTGGTCAGTTATTGCTGATGTCTTCTGGGAGTGATTGAGG  505

seq1  TAGTGCTTATGGGACCCCATGCTTGTTCTGTCTTCAAGTATCATCATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTTATGGGACCCCATGCTTGTTCTGTCTTCAAGTATCATCATTTA  555

seq1  ATCTTTCTTTCCATACTCTTACTGTTATGATTTTATATACCACTTACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTTCCATACTCTTACTGTTATGATTTTATATACCACTTACCAC  605

seq1  GAGGTCCTCACCAGAACCTCAACTCATAGTGCATGTCAGCACCAGGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCTCACCAGAACCTCAACTCATAGTGCATGTCAGCACCAGGTCTT  655

seq1  TGTTACTCCAGAGTAACCCAGTGGAATTTTATTAAACTGGAAATAAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTCCAGAGTAACCCAGTGGAATTTTATTAAACTGGAAATAAGATG  705

seq1  AAATTCTCCAACAAATGGATGGACCTAGAAATTATATTAAGTGATAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCCAACAAATGGATGGACCTAGAAATTATATTAAGTGATAATAA  755

seq1  ATTTAATAAATTTAAGTAGACTCAGAAAGACAAATATTATATATTCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAATTTAAGTAGACTCAGAAAGACAAATATTATATATTCTCTG  805

seq1  CCATATGGGCAATGTAGCTTGTATGGGTATACTTACACATACATACACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGGGCAATGTAGCTTGTATGGGTATACTTACACATACATACACAT  855

seq1  ACATACACAGAGACACACATGAGAGAGGGGGGTGGCAGGCAGGCAGAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACAGAGACACACATGAGAGAGGGGGGTGGCAGGCAGGCAGAGGT  905

seq1  GGGGAGGAGGATGGGAGGGGGAGTTCATGTGAGAATAGGCCAGGAACATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAGGATGGGAGGGGGAGTTCATGTGAGAATAGGCCAGGAACATA  955

seq1  GAATGTGTCAGAGGGAGGAGACTGGGGTGGAGTTTGTAGAGTCTTTTCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTCAGAGGGAGGAGACTGGGGTGGAGTTTGTAGAGTCTTTTCAG  1005

seq1  AAAGAGGCTTTAAGGTAGGTACGTTGGTAGTAACAATGATCCAAGTCTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCTTTAAGGTAGGTACGTTGGTAGTAACAATGATCCAAGTCTTA  1055

seq1  TCTTTTATTCTCTAACACTAATTGTTGTAGTTGTCTTTTGGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTCTCTAACACTAATTGTTGTAGTTGTCTTTTGGAATTC  1101

seq1: chr18_63864527_63865621
seq2: B6Ng01-030C12.g_69_1137

seq1  GAATTCTGGTGTTGGGAGGCATCCAGTTCAGTTCAGAAGAGATGGATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTGTTGGGAGGCATCCAGTTCAGTTCAGAAGAGATGGATTAA  50

seq1  TATTATTTCTACCTGTCCTTCCACAGCTTAGGAATGAAGCTCCGGGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTCTACCTGTCCTTCCACAGCTTAGGAATGAAGCTCCGGGTTTG  100

seq1  TACCTAAATACTGCACACACACACACACCACACCACACCACACTTTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAATACTGCACACACACACACACCACACCACACCACACTTTAACT  150

seq1  GTCCTTCCAGGTCACAGAAAGCATCTAAAACAAGACCTCTAAGGAGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCAGGTCACAGAAAGCATCTAAAACAAGACCTCTAAGGAGGTTT  200

seq1  CTAAGACACACTGTGAAAAGAACTATAAGAATCAGATCTGAGAAGGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACACACTGTGAAAAGAACTATAAGAATCAGATCTGAGAAGGCAGT  250

seq1  TTAATGTTCATTTTGTGTGTGTGTGCTCTTCCATCTATATTTGCAATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTCATTTTGTGTGTGTGTGCTCTTCCATCTATATTTGCAATCTT  300

seq1  TCTCTATCCTGACCTTTGTCCCAGGAAGATGATGTTCATGGCCTGCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATCCTGACCTTTGTCCCAGGAAGATGATGTTCATGGCCTGCATCA  350

seq1  AGTTCCCTCCATAGAGCTTATTGGATATCAGAAAATGATGAGATCTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCTCCATAGAGCTTATTGGATATCAGAAAATGATGAGATCTAGAT  400

seq1  ACACTATTCCTTCTTGCTCTGTTGCCACAGGTTACGACACCGCCAGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATTCCTTCTTGCTCTGTTGCCACAGGTTACGACACCGCCAGAGTT  450

seq1  TGCAGCTTAGGCCATACCATTTTCTAATTCATGCCCTTCACTTTCCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTAGGCCATACCATTTTCTAATTCATGCCCTTCACTTTCCTTGC  500

seq1  CTCATCATAGCTAGGAATTGGTATCACTCCTGGCTGTTAACAGTACCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATAGCTAGGAATTGGTATCACTCCTGGCTGTTAACAGTACCCAG  550

seq1  GTACCATGTGAGAACCACTGGCCTGGACACCCGGCCTCCTGCGTGGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATGTGAGAACCACTGGCCTGGACACCCGGCCTCCTGCGTGGACAC  600

seq1  CTGGCCTGCTGATAGGCACCTGTGCAAATGTGCCTAGGTGAGAGAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGCTGATAGGCACCTGTGCAAATGTGCCTAGGTGAGAGAATAAT  650

seq1  GAGCTGGGCATCTCCCATTCCCACTCCCATTCCCACTCCCATTCCCATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCATCTCCCATTCCCACTCCCATTCCCACTCCCATTCCCATTC  700

seq1  GAGGCTGTCTGGTAACTAGAGTGTCGACAGGTAGCTATAGGACAAGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTCTGGTAACTAGAGTGTCGACAGGTAGCTATAGGACAAGGAGG  750

seq1  GGCTTGGACAGTGTGATTCCTTAAAGGGCTTCTTATGCTTCTAGAATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGACAGTGTGATTCCTTAAAGGGCTTCTTATGCTTCTAGAATGAA  800

seq1  CCACTCATAGCTACTTAAGCACGTACACCATTGGTGAGCCTTAATACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATAGCTACTTAAGCACGTACACCATTGGTGAGCCTTAATACTAT  850

seq1  AGCTGATCAGCCACACTCAAAGACTTCACTTTCTTAATGTAAATAGAGGT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCTGATCAGCCACACTCAAAGACTTCACTTTC-TAATGTAAATAGAGGT  899

seq1  CTTTTAGCTTTAGAAATCATTGCTAATTTCTCTTCCCCTGTTAACACATC  950
      | |||||| ||||||||||||||| ||||||||| ||||||  |||||| 
seq2  C-TTTAGC-TTAGAAATCATTGCT-ATTTCTCTT-CCCTGT--ACACAT-  942

seq1  CCCCGAGCCTAAATGTATGCTAGACTCAGTCCCTTCAAAGTAAATGTTTT  1000
      ||||||| ||||||||||||||||||||||||||   |||| ||||||||
seq2  CCCCGAG-CTAAATGTATGCTAGACTCAGTCCCT--CAAGT-AATGTTTT  988

seq1  CTATTTGCCATTTAGTGGCTAATATGTCACTTTTTTTTTTTTAAGCCAAG  1050
      |||||||||||||||| ||| |||||||||   |||||||||||| ||||
seq2  CTATTTGCCATTTAGT-GCT-ATATGTCAC---TTTTTTTTTAAG-CAAG  1032

seq1  ATCATCGTTTTTTTACACTCCTAAACTCTACAGTGGAAAAGGCAA  1095
      ||||||||||||    ||||   |||| | ||  || ||||||||
seq2  ATCATCGTTTTT---AACTC--TAACT-TTCA--GGGAAAGGCAA  1069