BAC Information

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BAC

Clone NameB6Ng01-030K14
Chromosome10 (Build37)18 (Build37)
Map Location 104,053,903 - 104,054,36382,521,430 - 82,522,421
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030K14.bB6Ng01-030K14.g
ACCDH860496DH860497
length962992
definitionDH860496|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K14, 5' end.DH860497|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(82,521,430 - 82,522,421)
sequence
gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgatat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagagaaaaacactcctccattgttgg
tgggattgcaagcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaattggacatagtactaccagaggatccagcaatacctctcctgg
gcatatatccagaagatgtcccaaccggtaagaaggacacatgctccact
atgttcatagcagccttatttataatagccagaagctgtaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaagaatgaatttatgaaattcctagtc
aaatggatgggcctggagggcatcatccttagtgaggtaacacattcaca
aaggaactcacacaataagtactcactgataagtggatattagcccaaaa
cctaggatacccaagatataagatacaatttgctaaacacatgaaactca
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccacggaaagagttacaaagtttggagctgagacgaaaggctg
gaccatctagagactgccatatccagggatccaccccataatcagcttcc
aaacgctgacaccattgcatacactagcaagattttatcgaaaggaccca
gatgtagctgtctcttgtgagactatgccgggcctagcaaacacagaagt
ggatgctcacagtcagctatgatggatcacaggctctatggagagctaag
aaagtaccaaga
gaattcaatgtggggagcccagagggtgagttgttttagaaagaaagtta
tttcagactcttaattgggtgtgaaagagacaggaagaaggcagagtttc
catagagcaggagtcggttcccaggagtggggtatggtgaagctgctagt
ctaaaagctttaagaaagcatcttatagcagaaagcagggtaagtcatgg
gaagggaggtgagctggccagcccacctggtccaatcactaagtgtcctc
tcacgttggtcatatccacacatgtagcttcgaggcagggatgaggtgca
acaagcatccgggagaattctaaactctcttctgcatctctggcctccag
caagggcgttctcacaactgcagcgttggtgcccttgcttcttgtgttct
tataagtttagggaggtgacttcctcaggcctcagtaactccactccacc
ttggaagcttcatggaaacacggtaggctctgggccacacagggaaactg
ttcacacctttgttgcacttggtattttctatgtgttcagttcctagggg
cagggactatggttgagggacagtggcttgctagacttggggaaacatgc
ccctctcattagctccatttaactcataaaacatgctatgtgacgcccag
acacgagtgaaatgatagctgcagtccatcagagcatcattgttttcacc
tctgttgactcttagtgggaccagcagctacttttcatgtatatgtggtg
gcattagctattgtcttcacaacccatcagatttctagatttttccctcc
cacaggacagaagttgggactcattgacctcaatgtcacctcttctgtgt
cctcttcacactaaactaaactcttatggaaccagaatcagagtagccac
attcttctggaggaaaaaaaaacaaaaagaaagatggaacctttcactct
ctgtttcaagcatatgcaaactataatatggaaaagaccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-030K14.b_42_514 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTACAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| |||||||||||||||||||||| |||||||||||||||||||| |
seq2  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCTG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTG--TTCCTCTT  288
      |||||||||||| |||||||||||||||||||||||||||  || |||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTTTTCTCTT  300

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  350

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  388
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTCTGACTGGTGTGAGGTGGAATATCAGGGTTGTTTTGATTTGCATTT  400

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  450

seq1  CGGTATTCCTCAGGTGAGAATTC  461
      |||||||||||| ||||||||||
seq2  CGGTATTCCTCAAGTGAGAATTC  473

seq1: chr18_82521430_82522421
seq2: B6Ng01-030K14.g_67_1050 (reverse)

seq1  TTTCCATTACTATAGTTTTGCAATATGCTTGAAATCAGAAGTGTGAAA-G  49
      |||||| || ||||| ||||| |||||||||||| ||| || |||||| |
seq2  TTTCCA-TATTATAG-TTTGC-ATATGCTTGAAA-CAG-AGAGTGAAAGG  45

seq1  TTCCATCTTTCCTTTTTTTTTTTTTTTTCCTCAAGATGAATGTGGCTACT  99
      |||||||||||  ||||| ||||||||||||| ||| |||||||||||||
seq2  TTCCATCTTTC--TTTTTGTTTTTTTTTCCTCCAGAAGAATGTGGCTACT  93

seq1  CTGATTCTGGTTCCATATGAGTTTTAGTTTAGTGTGAAGAGGACACAGGA  149
      ||||||||||||||||| ||| |||||||||||||||||||||||||| |
seq2  CTGATTCTGGTTCCATAAGAG-TTTAGTTTAGTGTGAAGAGGACACAGAA  142

seq1  GAGGTGACATTGAGGTCAATGAGTCCAACTTTCTGTCCTGTGGGAGGGAA  199
      |||||||||||||||||||||||||| |  ||||||||||||||||||||
seq2  GAGGTGACATTGAGGTCAATGAGTCCCAACTTCTGTCCTGTGGGAGGGAA  192

seq1  AAGTCTAGAAATCTGATGGGTTGTGAAGACAATAGCTAATGCCACCACAT  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGAAATCTGATGGGTTGTGAAGACAATAGCTAATGCCACCACAT  242

seq1  AATACATGAAAAGTAGCTGCTGGTCCCACTAAGAGTCAACAGAGGTGAAA  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATACATGAAAAGTAGCTGCTGGTCCCACTAAGAGTCAACAGAGGTGAAA  291

seq1  ACAATGATGCTCTGATGGACTGCAGCTATCATTTCACTCGTGTCTGGGCG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATGCTCTGATGGACTGCAGCTATCATTTCACTCGTGTCTGGGCG  341

seq1  TCACATAGCATGTTTTATGAGTTAAATGGAGCTAATGAGAGGGGCATGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGCATGTTTTATGAGTTAAATGGAGCTAATGAGAGGGGCATGTT  391

seq1  TCCCCAAGTCTAGCAAGCCACTGTCCCTCAACCATAGTCCCTGCCCCTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGTCTAGCAAGCCACTGTCCCTCAACCATAGTCCCTGCCCCTAG  441

seq1  GAACTGAACACATAGAAAATACCAAGTGCAACAAAGGTGTGAACAGTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAACACATAGAAAATACCAAGTGCAACAAAGGTGTGAACAGTTTC  491

seq1  CCTGTGTGGCCCAGAGCCTACCGTGTTTCCATGAAGCTTCCAAGGTGGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGCCCAGAGCCTACCGTGTTTCCATGAAGCTTCCAAGGTGGAG  541

seq1  TGGAGTTACTGAGGCCTGAGGAAGTCACCTCCCTAAACTTATAAGAACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTACTGAGGCCTGAGGAAGTCACCTCCCTAAACTTATAAGAACAC  591

seq1  AAGAAGCAAGGGCACCAACGCTGCAGTTGTGAGAACGCCCTTGCTGGAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAAGGGCACCAACGCTGCAGTTGTGAGAACGCCCTTGCTGGAGG  641

seq1  CCAGAGATGCAGAAGAGAGTTTAGAATTCTCCCGGATGCTTGTTGCACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGCAGAAGAGAGTTTAGAATTCTCCCGGATGCTTGTTGCACCT  691

seq1  CATCCCTGCCTCGAAGCTACATGTGTGGATATGACCAACGTGAGAGGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGCCTCGAAGCTACATGTGTGGATATGACCAACGTGAGAGGACA  741

seq1  CTTAGTGATTGGACCAGGTGGGCTGGCCAGCTCACCTCCCTTCCCATGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGATTGGACCAGGTGGGCTGGCCAGCTCACCTCCCTTCCCATGAC  791

seq1  TTACCCTGCTTTCTGCTATAAGATGCTTTCTTAAAGCTTTTAGACTAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGCTTTCTGCTATAAGATGCTTTCTTAAAGCTTTTAGACTAGCA  841

seq1  GCTTCACCATACCCCACTCCTGGGAACCGACTCCTGCTCTATGGAAACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACCATACCCCACTCCTGGGAACCGACTCCTGCTCTATGGAAACTC  891

seq1  TGCCTTCTTCCTGTCTCTTTCACACCCAATTAAGAGTCTGAAATAACTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTTCCTGTCTCTTTCACACCCAATTAAGAGTCTGAAATAACTTT  941

seq1  CTTTCTAAAACAACTCACCCTCTGGGCTCCCCACATTGAATTC  992
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAAACAACTCACCCTCTGGGCTCCCCACATTGAATTC  984