BAC Information

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BAC

Clone NameB6Ng01-032A22
Chromosome18 (Build37)
Map Location 83,742,606 - 83,743,697
singlet/doubletsinglet
Overlap genenone
Upstream geneMbp, Zfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032A22.bB6Ng01-032A22.g
ACCDH861501DH861502
length1,1321,081
definitionDH861501|Mus musculus domesticus DNA, BAC clone: B6Ng01-032A22, 5' end.DH861502|Mus musculus domesticus DNA, BAC clone: B6Ng01-032A22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcataagccaccactatgtctttttattggggggaattaag
actactaatattgagagttattgattaaaaactagatattgattcctgtt
attttgtttgtgatgtggggttttccatttcttttgatttgctgttatag
gtcacttcaatgtctttttattatgtaatgttttcctttctcagttgact
atgattctcttgcaatcgaccaatcttgcctggaatctgtagtctcacag
accttggatcctttcagagtcttcattgaaaagccaggtgttattctaat
gcacctgccttcattggcagtgtggtcttttccccttccaaccctgaaca
tcctttctttgctttatgccatttagtgtttggtgttatttttatgtgcc
atgggtaatttcttttctgatctaatctatttgttattgtgtgagcttct
tctaccttgatatatatctctttctttaatttgggataatttttatgatt
ttaaaaatatattttctgtctagttgtcctggcatgctctccttccttcg
tacttattattgatttggccttgtcatggctgagaatttctccaggtttt
gtacctggattctttaagaattaacattttctttgactgaggtatctctt
tcttctaccttctttataacccgagattctcttttccgtgtcttttcatc
tgttgttgaggcttatctctgaggtttttgtttgacatcttgaatttttc
atttccaattttatttcagttagattttctttagtgattctattcttttg
ttaaattctacttttatgtcttgagttgttttcgactgtggaaatacgtt
catttccttgaaataactttcctcattattttacattaaagtgatgtatg
cccttgatagtgaggtatgtttcttttcattcagctgcttgtgttttaat
gggccttcattaaggcatttatttatattccttttgaaggttcttgaaaa
aattaaccacttgattttcaagtcagtgtctccattttagcttcattatt
tctcctaggcctactgccatagaattcttggctctcgtgaaaacgtgata
tgtctcatttgttcctgttggggttttgtgcc
gaattcttatgtggtgtacgcccctcctttgtccagagcatatgcagagg
tacaaagaaaacagctttagatacttctctcaaaggagggcagaagtacc
caagatagtccaggtaggaggaagagaagtgaggagaatatagatttgag
aagtgactttaggctccctgtgctgtgagcaggcctggccctttccctcc
tctctgtggaaaatggggcaggaggcagagcatttctccttcccatcagc
agcaactgaaggatccctgcacagaacagagcaggaaaatgagacccaga
gctggagatgtggaactgtgggttcggaacactcgctgacagctgctgtg
acatccctattgtctgaatcctttaaagccacacgggaaacttccagtga
gaactggaatgaaaaaaaaaatgccaccacaattaagtctcactagacac
ctagcgcctgggctctgggaaaaggaggccttccaccaggcgagtgaaag
acaagggggaacagcttgccagcccgccgccccccatggttaatgaaggc
tctgccaggaagtgtgctcagaggagccaggatcttccttcattcagaga
actgtgctttgggcgatgtcataagaagcagcttgagaatggtggatgga
aatattcctgagagtgatctgaactatacaccacatctcaaactccaaga
agagtatttgttccactcaaaaaaacacccaaggtatctcagcaattaat
tttcaaggataaagaccgagtatgaaaatttgactaaactttcgcctaac
ccctctgcctctccaagtttagcaaacagcaagacaacgataggcttttt
actttccactccctccatcatgaatcaagtcccttgtatgaaacaaatcg
ttacaacaacaggactgacagcctgacagcctggtttggttataatggga
gtgacagccagcaaatcagaaatcatggcagtgcgtgtatgtgaacgaca
atttgtgcttagttgaatacctggaaactcagatatccgaaaaagagcag
agtaaattcaaacaacgttttatcatcccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83742606_83743697
seq2: B6Ng01-032A22.g_67_1147

seq1  GAATTCTTATGTGGTGTACGCCCCTCCTTTGTCCAGAGCATATGCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGTGGTGTACGCCCCTCCTTTGTCCAGAGCATATGCAGAGG  50

seq1  TACAAAGAAAACAGCTTTAGATACTTCTCTCAAAGGAGGGCAGAAGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAAAACAGCTTTAGATACTTCTCTCAAAGGAGGGCAGAAGTACC  100

seq1  CAAGATAGTCCAGGTAGGAGGAAGAGAAGTGAGGAGAATATAGATTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAGTCCAGGTAGGAGGAAGAGAAGTGAGGAGAATATAGATTTGAG  150

seq1  AAGTGACTTTAGGCTCCCTGTGCTGTGAGCAGGCCTGGCCCTTTCCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTTTAGGCTCCCTGTGCTGTGAGCAGGCCTGGCCCTTTCCCTCC  200

seq1  TCTCTGTGGAAAATGGGGCAGGAGGCAGAGCATTTCTCCTTCCCATCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGGAAAATGGGGCAGGAGGCAGAGCATTTCTCCTTCCCATCAGC  250

seq1  AGCAACTGAAGGATCCCTGCACAGAACAGAGCAGGAAAATGAGACCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGAAGGATCCCTGCACAGAACAGAGCAGGAAAATGAGACCCAGA  300

seq1  GCTGGAGATGTGGAACTGTGGGTTCGGAACACTCGCTGACAGCTGCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGATGTGGAACTGTGGGTTCGGAACACTCGCTGACAGCTGCTGTG  350

seq1  ACATCCCTATTGTCTGAATCCTTTAAAGCCACACGGGAAACTTCCAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTATTGTCTGAATCCTTTAAAGCCACACGGGAAACTTCCAGTGA  400

seq1  GAACTGGAATGAAAAAAAAAATGCCACCACAATTAAGTCTCACTAGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGAATGAAAAAAAAAATGCCACCACAATTAAGTCTCACTAGACAC  450

seq1  CTAGCGCCTGGGCTCTGGGAAAAGGAGGCCTTCCACCAGGCGAGTGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGCCTGGGCTCTGGGAAAAGGAGGCCTTCCACCAGGCGAGTGAAAG  500

seq1  ACAAGGGGGAACAGCTTGCCAGCCCGCCGCCCCCCATGGTTAATGAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGGGAACAGCTTGCCAGCCCGCCGCCCCCCATGGTTAATGAAGGC  550

seq1  TCTGCCAGGAAGTGTGCTCAGAGGAGCCAGGATCTTCCTTCATTCAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGGAAGTGTGCTCAGAGGAGCCAGGATCTTCCTTCATTCAGAGA  600

seq1  ACTGTGCTTTGGGCGATGTCATAAGAAGCAGCTTGAGAATGGTGGATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTTTGGGCGATGTCATAAGAAGCAGCTTGAGAATGGTGGATGGA  650

seq1  AATATTCCTGAGAGTGATCTGAACTATACACCACATCTCAAACTCCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTGAGAGTGATCTGAACTATACACCACATCTCAAACTCCAAGA  700

seq1  AGAGTATTTGTTCCACTCAAAAAAACACCCAAGGTATCTCAGCAATTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTTGTTCCACTCAAAAAAACACCCAAGGTATCTCAGCAATTAAT  750

seq1  TTTCAAGGATAAAGACCGAGTATGAAAATTTGACTAAACTTTCGCCTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGATAAAGACCGAGTATGAAAATTTGACTAAACTTTCGCCTAAC  800

seq1  CCCTCTGCCTCTCCAAGTTTAGCAAACAGCAGGACAACGATAGGCTTTTT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTCTGCCTCTCCAAGTTTAGCAAACAGCAAGACAACGATAGGCTTTTT  850

seq1  ACTTTCCACTCCCTCCATCATGAATCAAGTCCCTTGTATGAAACAAATCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCACTCCCTCCATCATGAATCAAGTCCCTTGTATGAAACAAATCG  900

seq1  TTACAACAACAGGGACTGACAGCCTGACAGCCTGG-TTGGTTATTAATGG  949
      ||||||||||| ||||||||||||||||||||||| ||||||| ||||||
seq2  TTACAACAACA-GGACTGACAGCCTGACAGCCTGGTTTGGTTA-TAATGG  948

seq1  GAGTGACAGCCAGCAAATCAGAAATCATGGCAGTGCGTGTATGTGAACGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACAGCCAGCAAATCAGAAATCATGGCAGTGCGTGTATGTGAACGA  998

seq1  CAATTTGTGCTTAGTTGAATAACCTGGAAACTCAGGATATCCGAGAGAAA  1049
      |||||||||||||||||||| ||||||||||||| |||||||  || |||
seq2  CAATTTGTGCTTAGTTGAAT-ACCTGGAAACTCA-GATATCC--GAAAAA  1044

seq1  GAGCAAGAGTAAAATCAAACAGAGACGTTTCTATCCATCCCAC  1092
      |||| |||||||| |||||||   |||||| ||| ||||||||
seq2  GAGC-AGAGTAAATTCAAACA---ACGTTT-TAT-CATCCCAC  1081