BAC Information

Click to search

BAC

Clone NameB6Ng01-033L10
Chromosome18 (Build37)
Map Location 84,908,889 - 85,025,025
singlet/doubletdoublet
Overlap geneB230399E16Rik, Cyb5
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725
Downstream geneFbxo15, 1700034H14Rik, LOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033L10.bB6Ng01-033L10.g
ACCDH862686DH862687
length5311,049
definitionDH862686|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L10, 5' end.DH862687|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,908,889 - 84,909,425)(85,023,969 - 85,025,025)
sequence
ctggacagcctcatccagtgtgttctggaagcttcgatggctcttgcagg
ccactctgaaagaactgcaggaggcggagaagtagcctctctcttgcctt
tgccatcaagagtagacagaggaagcgaccttcaagggactcctcctgta
gttgctatgcaaatgagctgtcagagcccgtggcatgctcttctgaagtg
tgcagctgagctccccttctgtggctgtgacgtggacctctcttgctcct
gcccagctcggttcgatctggtttcgtggcgacctccggtctgtcactcc
ttccgcagtgaccgaagggaggagtttcaccagagttgccagtctggaac
cctctgaggactgtacacagaccttgccactatagacaagaggctgctgc
tcttccttgttagctgctaacaagctaaagcgtggctgtgggcatactga
tggatatgtttgcaaataattgtgtgcataatgttgcacccatgagtgta
tgagtgggtttgtatatatgaatgtgtattg
gaattcttcatctgtgaaaggtaagcagccacaaaaagcaaaacttcatt
cgtcaagaccccaaaaaggctaagtgagtcagaagctaacagcctctgca
aggcgggatgctttcaatgaatattcaagacttgctttaaaaatcgcaga
atctcagcatcactaggaaaacattgtgtggggagcacagacaacttgcc
ttcaacgcggcctaggagatgttacgggcacccactgcccagaacggaaa
ggcaacaggagtcttacccgatgctctcttcctcccttccacagctctgc
ttaaacctggctcaaccacagaacagggaaatgcaaacttgctccttggc
ccttaacacctgttttcattccaaataatggtctctcggatttctatcat
cactaacctgtctaatgccatgatcttatataacaagactcaatttcata
aatgtaaactcaaaacctagggggcaggactagggggaaaaaaaaggttc
aaaatatctaggcaatgaggcttataatcctgtgggcagacgccagctcg
ggacccaagccctgctgctgtttagatggcctccctgtgggattcccacc
tctggacctcagatcattatttccggaagacagagttcacattgcacaag
tgaccttcaaactgtgttcgtgactagaaagataatttttctactattct
cctatttcacgatcaccttccggagttacatctcacctaaagcacacccc
aaacacccaactacacaggacaccgcagagggggaaccacagctcaagtc
tggccgcggctgcagtttccaaatgagcagggaaactcatcctggtttgt
gttaaaaaaaaaacactctttttttttttccctagttgtggtttctgaag
agattctcatggtcaccaggctggctctctaattcttgggaactctcctg
cctgagattacaggcatgcatgcacactacactagtcatgctttaaatca
ctgtcagctgcatcaaccctgcttgtctctctttacctgggagaatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_84908889_84909425
seq2: B6Ng01-033L10.b_47_583

seq1  GAATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGCTTCGATGGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGACAGCCTCATCCAGTGTGTTCTGGAAGCTTCGATGGCTCT  50

seq1  TGCAGGCCACTCTGAAAGAACTGCAGGAGGCGGAGAAGTAGCCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCCACTCTGAAAGAACTGCAGGAGGCGGAGAAGTAGCCTCTCTCT  100

seq1  TGCCTTTGCCATCAAGAGTAGACAGAGGAAGCGACCTTCAAGGGACTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGCCATCAAGAGTAGACAGAGGAAGCGACCTTCAAGGGACTCCT  150

seq1  CCTGTAGTTGCTATGCAAATGAGCTGTCAGAGCCCGTGGCATGCTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGTTGCTATGCAAATGAGCTGTCAGAGCCCGTGGCATGCTCTTCT  200

seq1  GAAGTGTGCAGCTGAGCTCCCCTTCTGTGGCTGTGACGTGGACCTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGCAGCTGAGCTCCCCTTCTGTGGCTGTGACGTGGACCTCTCTT  250

seq1  GCTCCTGCCCAGCTCGGTTCGATCTGGTTTCGTGGCGACCTCCGGTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCCCAGCTCGGTTCGATCTGGTTTCGTGGCGACCTCCGGTCTGT  300

seq1  CACTCCTTCCGCAGTGACCGAAGGGAGGAGTTTCACCAGAGTTGCCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTCCGCAGTGACCGAAGGGAGGAGTTTCACCAGAGTTGCCAGTC  350

seq1  TGGAACCCTCTGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCCTCTGAGGACTGTACACAGACCTTGCCACTATAGACAAGAGGC  400

seq1  TGCTGCTCTTCCTTGTTAGCTGCTAACAAGCTAAAGCGTGGCTGTGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCTTCCTTGTTAGCTGCTAACAAGCTAAAGCGTGGCTGTGGGCA  450

seq1  TACTGATGGATATGTTTGCAAATAATTGTGTGCATAATGTTGCACCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGGATATGTTTGCAAATAATTGTGTGCATAATGTTGCACCCATG  500

seq1  AGTGTATGAGTGGGTTTGTATATATGAATGTGTATTG  537
      |||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGAGTGGGTTTGTATATATGAATGTGTATTG  537

seq1: chr18_85023969_85025025
seq2: B6Ng01-033L10.g_68_1116 (reverse)

seq1  TAGATTCCTCACAGGTAAAGGAGAGACAAGCAGTGTCTGATTGCAGCTGA  50
      |||||| ||| |||||||| ||||||||||||| || ||| |||||||||
seq2  TAGATT-CTCCCAGGTAAA-GAGAGACAAGCAGGGT-TGA-TGCAGCTGA  46

seq1  CAGTGATTTAAAGCATTGACTAGTGTAGTGTGCATGCATGCCTGTAATCT  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGTGATTTAAAGCA-TGACTAGTGTAGTGTGCATGCATGCCTGTAATCT  95

seq1  CAGGCAGGAGAGTTCCCAAGAATTAGAGAGGCCAGCCTGGGTGACCATGA  150
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  CAGGCAGGAGAGTTCCCAAGAATTAGAGA-GCCAGCCT-GGTGACCATGA  143

seq1  GAATCTCTCCAGAAACCACAACTAGGAAAAAAAAAAAAGAGTGTTTTTTT  200
      |||||||| ||||||||||||||||| |||||||||||||||| ||||||
seq2  GAATCTCTTCAGAAACCACAACTAGGGAAAAAAAAAAAGAGTG-TTTTTT  192

seq1  TTTTAACACAAACCAGGATGAGTTTCCCTGCTCATTTGGAAACTGCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACACAAACCAGGATGAGTTTCCCTGCTCATTTGGAAACTGCAGCC  242

seq1  GCGGCCAGACTTGAGCTGTGGTTCCCCCTCTGCGGTGTCCTGTGTAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCCAGACTTGAGCTGTGGTTCCCCCTCTGCGGTGTCCTGTGTAGTTG  292

seq1  GGTGTTTGGGGTGTGCTTTAGGTGAGATGTAACTCCGGAAGGTGATCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGGGGTGTGCTTTAGGTGAGATGTAACTCCGGAAGGTGATCGTG  342

seq1  AAATAGGAGAATAGTAGAAAAATTATCTTTCTAGTCACGAACACAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAGAATAGTAGAAAAATTATCTTTCTAGTCACGAACACAGTTTG  392

seq1  AAGGTCACTTGTGCAATGTGAACTCTGTCTTCCGGAAATAATGATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACTTGTGCAATGTGAACTCTGTCTTCCGGAAATAATGATCTGAG  442

seq1  GTCCAGAGGTGGGAATCCCACAGGGAGGCCATCTAAACAGCAGCAGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAGGTGGGAATCCCACAGGGAGGCCATCTAAACAGCAGCAGGGCT  492

seq1  TGGGTCCCGAGCTGGCGTCTGCCCACAGGATTATAAGCCTCATTGCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCCGAGCTGGCGTCTGCCCACAGGATTATAAGCCTCATTGCCTAG  542

seq1  ATATTTTGAACCTTTTTTTTCCCCCTAGTCCTGCCCCCTAGGTTTTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGAACCTTTTTTTTCCCCCTAGTCCTGCCCCCTAGGTTTTGAGT  592

seq1  TTACATTTATGAAATTGAGTCTTGTTATATAAGATCATGGCATTAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTATGAAATTGAGTCTTGTTATATAAGATCATGGCATTAGACAG  642

seq1  GTTAGTGATGATAGAAATCCGAGAGACCATTATTTGGAATGAAAACAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGATGATAGAAATCCGAGAGACCATTATTTGGAATGAAAACAGGT  692

seq1  GTTAAGGGCCAAGGAGCAAGTTTGCATTTCCCTGTTCTGTGGTTGAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGGCCAAGGAGCAAGTTTGCATTTCCCTGTTCTGTGGTTGAGCCA  742

seq1  GGTTTAAGCAGAGCTGTGGAAGGGAGGAAGAGAGCATCGGGTAAGACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAGCAGAGCTGTGGAAGGGAGGAAGAGAGCATCGGGTAAGACTCC  792

seq1  TGTTGCCTTTCCGTTCTGGGCAGTGGGTGCCCGTAACATCTCCTAGGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTTTCCGTTCTGGGCAGTGGGTGCCCGTAACATCTCCTAGGCCG  842

seq1  CGTTGAAGGCAAGTTGTCTGTGCTCCCCACACAATGTTTTCCTAGTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGAAGGCAAGTTGTCTGTGCTCCCCACACAATGTTTTCCTAGTGATG  892

seq1  CTGAGATTCTGCGATTTTTAAAGCAAGTCTTGAATATTCATTGAAAGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTCTGCGATTTTTAAAGCAAGTCTTGAATATTCATTGAAAGCAT  942

seq1  CCCGCCTTGCAGAGGCTGTTAGCTTCTGACTCACTTAGCCTTTTTGGGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCTTGCAGAGGCTGTTAGCTTCTGACTCACTTAGCCTTTTTGGGGT  992

seq1  CTTGACGAATGAAGTTTTGCTTTTTGTGGCTGCTTACCTTTCACAGATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACGAATGAAGTTTTGCTTTTTGTGGCTGCTTACCTTTCACAGATGA  1042

seq1  AGAATTC  1057
      |||||||
seq2  AGAATTC  1049