BAC Information

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BAC

Clone NameB6Ng01-034H08
Chromosome18 (Build37)
Map Location 83,782,617 - 83,783,555
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik, LOC665284
Downstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034H08.bB6Ng01-034H08.g
ACCDH863208DH863209
length1,233935
definitionDH863208|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H08, 5' end.DH863209|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagacctttaagcaagacctaataccaatactcttcaaact
atttcacaaaatagaaacaaaaggagtgctacctaattcattctataaag
ccacaattatgcttatacctaaaccacacaaagaccaaagaaagaaagag
aacttcagaccaatctccgttataaacactgatgcaaaaatactcaataa
aatttgtgccaaccaaatccaagaacacatcaaaaagatcattcaccctg
atcaggtaggcttcgttccaaggatacagggatgattcaatatacagaaa
tccatcaaggtaatccactacataaactcaaagagaaaaaccacatgatc
atttcatcagatgctgaaaaaacatttgataaaattcagcatcccttcat
gataaaagtcttggaaaaatcaggaatccaaggcccatacctaaacatag
taaaagcaatatacagcaaaccagtagccaacatcaaactaaatggagag
aaacttgaatcaaccccactaaaatcagggactagacaagtctgcccacg
ctctcctatctattcaatatagtacacaaagttctagctagagtaagtag
acaacaaaaggaggtcaaagggatacaaattggaaaggaacttcaagtct
ctgaagaaagagattgaagaagatctcagaagatggaaagatctactatg
ctcgtgcattggcaggattaatatagtaaaaatggccatcttgctgaaag
caatctacagattcaatgcaatccccatcaaattgcaactcaattcttca
tagagttagaaggaggaatcctcaaattcatttggaatacaaaaatccag
gatagtgaaactattctcaacataaaagaacttctggggaaatcacattc
ctgaccaaagctgtatacagagcatagtgataaaacttcatgtattgtaa
gagcagcagggatcatgaaagatgaagaccagaatgacaccactatgtca
ctgatctttgacaggactaaactattcactggaaaagacgcattaacaat
atgctgtcacctgcagtcgagtgaagatcatggttcattcttacccttgt
ccagctcagctaatgtcaagaccctccattaacgacttgaacgttaagaa
ttgtggagcctgactggccgaatcgagaacctggctatgtgagactagtc
acatgagcctattcagtatgacattcctatcga
gaattcctcgcacaaaatcctgctcactagttttttttttttcctttacc
tttgtaaatgattgtaactaaaattagggaacagcatgtgtcagaagaac
tactattttctccctccttttgtcttggtttggtgaatagcaatgatgac
cttgcaaaaacaagcattggtaccagaagaagtgtgaattgcaaagcaca
cgtcacgtgaaagtcacgatgtccccgctacatcttttaatgcctttaag
tccccttgagcaccacaggtcaaatgtaaatttcatcgtgaaatgagatt
gaataaatggccaactccgtgagaaatctgtcttccttacctggctctac
attgcttcctctaatcatgtttaagacaccactttctgacagtgccttca
aagaatgtttcacagagagagtatcgttctcaaaaagaaaaatagacagt
gacagagcttctggataaaatcctgtgatttcatttactaaagaacatca
acagtcaaataaggtcatgttaagaaaacttgaaggaaacagaaaattta
attggaggtatagataccatgatttaataattggaggcaaccttagacac
ggtaatagtatcttccatagtggccaacgttaccttacagatatacttcc
tttgtttctaattaattaatttctttgtttgtttgtttacatcccaaaca
ctgccctcgctccttgtcgccccctcacatactcactcctccatgcccct
ccccttcacctctaagagggtgccccacagcgtatccctccaccctggct
catcacctctctacagggttaggtgcatcttctctactgaggcagacaag
ataaccttctgctacgtatgtgccatgggcctcagaacagtccatgatgc
tctttggtagtggctcatctctgagaactctcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_83782617_83783555
seq2: B6Ng01-034H08.g_67_1001

seq1  GAATTCCTCGCACAAAATCCTGCTCACTAGTTTTTTTTTTTTCCTTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGCACAAAATCCTGCTCACTAGTTTTTTTTTTTTCCTTTACC  50

seq1  TTTGTAAATGATTGTAACTAAAATTAGGGAACAGCATGTGTCAGAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATGATTGTAACTAAAATTAGGGAACAGCATGTGTCAGAAGAAC  100

seq1  TACTATTTTCTCCCTCCTTTTGTCTTGGTTTGGTGAATAGCAATGATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTCTCCCTCCTTTTGTCTTGGTTTGGTGAATAGCAATGATGAC  150

seq1  CTTGCAAAAACAAGCATTGGTACCAGAAGAAGTGTGAATTGCAAAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAAAACAAGCATTGGTACCAGAAGAAGTGTGAATTGCAAAGCACA  200

seq1  CGTCACGTGAAAGTCACGATGTCCCCGCTACATCTTTTAATGCCTTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACGTGAAAGTCACGATGTCCCCGCTACATCTTTTAATGCCTTTAAG  250

seq1  TCCCCTTGAGCACCACAGGTCAAATGTAAATTTCATCGTGAAATGAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTGAGCACCACAGGTCAAATGTAAATTTCATCGTGAAATGAGATT  300

seq1  GAATAAATGGCCAACTCCGTGAGAAATCTGTCTTCCTTACCTGGCTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGGCCAACTCCGTGAGAAATCTGTCTTCCTTACCTGGCTCTAC  350

seq1  ATTGCTTCCTCTAATCATGTTTAAGACACCACTTTCTGACAGTGCCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCCTCTAATCATGTTTAAGACACCACTTTCTGACAGTGCCTTCA  400

seq1  AAGAATGTTTCACAGAGAGAGTATCGTTCTCAAAAAGAAAAATAGACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTTTCACAGAGAGAGTATCGTTCTCAAAAAGAAAAATAGACAGT  450

seq1  GACAGAGCTTCTGGATAAAATCCTGTGATTTCATTTACTAAAGAACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGCTTCTGGATAAAATCCTGTGATTTCATTTACTAAAGAACATCA  500

seq1  ACAGTCAAATAAGGTCATGTTAAGAAAACTTGAAGGAAACAGAAAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAAATAAGGTCATGTTAAGAAAACTTGAAGGAAACAGAAAATTTA  550

seq1  ATTGGAGGTATAGATACCATGATTTAATAATTGGAGGCAACCTTAGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGGTATAGATACCATGATTTAATAATTGGAGGCAACCTTAGACAC  600

seq1  GGTAATAGTATCTTCCATAGTGGCCAACG-TACCTTACAGATATACTTCC  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTAATAGTATCTTCCATAGTGGCCAACGTTACCTTACAGATATACTTCC  650

seq1  TTTGTTTCTAATTAATTAATTTCTTTGTTTGTTTGTTTACATCCCAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTAATTAATTAATTTCTTTGTTTGTTTGTTTACATCCCAAACA  700

seq1  CTGCCCTCGCTCCTGGTCGCCCCCTCACATACTCACTCCTCCATGCCCCT  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCGCTCCTTGTCGCCCCCTCACATACTCACTCCTCCATGCCCCT  750

seq1  CCCCTTCACCTCTAAGAGGGTGCCCCACAGCGTATCCCTCCACCCTGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCACCTCTAAGAGGGTGCCCCACAGCGTATCCCTCCACCCTGGCT  800

seq1  CATCACCTCTCTACAGGATTAGGTGCATCTTCTTCTACTGAGGCCAGACA  849
      ||||||||||||||||| |||||||||||||| |||||||||| ||||||
seq2  CATCACCTCTCTACAGGGTTAGGTGCATCTTC-TCTACTGAGG-CAGACA  848

seq1  AGATAACCTTCTGCTACGTATGTGCCAGGGGCCTCAGAACAGTCCATGAA  899
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  AGATAACCTTCTGCTACGTATGTGCCATGGGCCTCAGAACAGTCCATG-A  897

seq1  TGCTCTTTGGTTGGTGGCTCAGTCTCTGAGAACTCTCGGA  939
      |||||||||| | |||||||| ||||||||||||||||||
seq2  TGCTCTTTGG-TAGTGGCTCA-TCTCTGAGAACTCTCGGA  935