BAC Information

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BAC

Clone NameB6Ng01-034P16
Chromosome18 (Build37)
Map Location 75,696,457 - 75,844,367
singlet/doubletdoublet
Overlap geneGm672
Upstream geneMyo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7
Downstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034P16.bB6Ng01-034P16.g
ACCDH863573DH863574
length877538
definitionDH863573|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P16, 5' end.DH863574|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,696,457 - 75,697,330)(75,843,828 - 75,844,367)
sequence
gaattccttgcgtagcatttttacactagaataggtttcttttcttttta
agaatttacttgtatatattgttcacaattcgctatcatggctgtcgtct
tttagttagggtcgaaaatgacctttcacgtaggtatgctatgagaacca
tgtgtgatcttgtggtttcttcctgcttggaaggtgaagaccttgatctt
aagatgtgggaggtggggcttttcagacaacaccgccattgcccggcaga
ggtgtcaagttgtagtccagggctgccaagggcaagtgtctggtaccggg
taaggtgtctccatgtgcttactctggcttaacagggaccacatatagag
ggcaactccaacctattcctggccaagccacagggagcagcagggcaggg
aggcaaggccacagctctcgtgtgtggctgtcaggacacatagtagggag
gcatgggtctgctgggtaacaaccatagagtgggttgtggggatagcaat
gacaatcagcaggaacaccagtgggactctagggagacacagctgcctaa
atgttgtggggcaccatgccctggatacctagtcagatggcagaggactg
aagaccatttctggggatgagaaggctaagtccctgatgactggcctacc
cacagggcactccctacatcccttcctgctttctgggggctcaccagcca
aggtggtatggctctaggaagttcccgactcaggcctgcttttacttttt
ccttccactgtgaaactggagctgcggctaccctttccagagagctccac
tctccctccatgccttccatgcaacccacaagtgtaagggcaggattcca
gaaaactcttttgttcccatagggaat
ttctttgagcagaactgatcccaccccatgccaagctaccccaggtcctg
tgagcagggcccagactgagttatatccacaaaagcgcgtggtcatctgg
ggctgctgcagcagcctgagtcacaggctcttacccgattcagcttccct
ccacgtaggcccatgcatgcggcagcagagggccaagtaaggagacgctg
tctgcgagttccaaggacacagttgagagcaggagggaacttggttgtca
acctctggcaggccagcaggagcctatccctggaggaggctgattttgct
caccgcactggagacaggcttgcttaatggatccataatagatatgagaa
gaggaaagtgtctttcaaagtgcccaattcctggtggcctgctgtgacct
cattgcttctctgattctggcattaggacattggggtggagacagcaaac
ccctatccttcccttcagtcatcagggttcccaggattcacaactccttt
ggtttttgtgaggtgcctgggggttgtgggtggaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75696457_75697330
seq2: B6Ng01-034P16.b_44_919

seq1  GAATTCCTTGCGTAGCATTTTTACACTAGAATAGGTTTCTTTTCTTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCGTAGCATTTTTACACTAGAATAGGTTTCTTTTCTTTTTA  50

seq1  AGAATTTACTTGTATATATTGTTCACAATTCGCTATCATGGCTGTCGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTACTTGTATATATTGTTCACAATTCGCTATCATGGCTGTCGTCT  100

seq1  TTTAGTTAGGGTCGAAAATGACCTTTCACGTAGGTATGCTATGAGAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTAGGGTCGAAAATGACCTTTCACGTAGGTATGCTATGAGAACCA  150

seq1  TGTGTGATCTTGTGGTTTCTTCCTGCTTGGAAGGTGAAGACCTTGATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATCTTGTGGTTTCTTCCTGCTTGGAAGGTGAAGACCTTGATCTT  200

seq1  AAGATGTGGGAGGTGGGGCTTTTCAGACAACACCGCCATTGCCCGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTGGGAGGTGGGGCTTTTCAGACAACACCGCCATTGCCCGGCAGA  250

seq1  GGTGTCAAGTTGTAGTCCAGGGCTGCCAAGGGCAAGTGTCTGGTACCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAAGTTGTAGTCCAGGGCTGCCAAGGGCAAGTGTCTGGTACCGGG  300

seq1  TAAGGTGTCTCCATGTGCTTACTCTGGCTTAACAGGGACCACATATAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGTCTCCATGTGCTTACTCTGGCTTAACAGGGACCACATATAGAG  350

seq1  GGCAACTCCAACCTATTCCTGGCCAAGCCACAGGGAGCAGCAGGGCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTCCAACCTATTCCTGGCCAAGCCACAGGGAGCAGCAGGGCAGGG  400

seq1  AGGCAAGGCCACAGCTCTCGTGTGTGGCTGTCAGGACACATAGTAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGCCACAGCTCTCGTGTGTGGCTGTCAGGACACATAGTAGGGAG  450

seq1  GCATGGGTCTGCTGGGTAACAACCATAGAGTGGGTTGTGGGGATAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGTCTGCTGGGTAACAACCATAGAGTGGGTTGTGGGGATAGCAAT  500

seq1  GACAATCAGCAGGAACACCAGTGGGACTCTAGGGAGACACAGCTGCCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCAGCAGGAACACCAGTGGGACTCTAGGGAGACACAGCTGCCTAA  550

seq1  ATGTTGTGGGGCACCATGCCCTGGATACCTAGTCAGATGGCAGAGGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGGGCACCATGCCCTGGATACCTAGTCAGATGGCAGAGGACTG  600

seq1  AAGACCATTTCT-GGGATGAGAAGGCTAAGTCCCTGATGACTGGCCTACC  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGACCATTTCTGGGGATGAGAAGGCTAAGTCCCTGATGACTGGCCTACC  650

seq1  CACAGGGCACTCCCTACATCCCTTCCTGC-TTCTGGGGGCTCACCAGCCA  698
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACAGGGCACTCCCTACATCCCTTCCTGCTTTCTGGGGGCTCACCAGCCA  700

seq1  AGGTGGTATGGCTCTAGGAAGTTCCCGACTCAGGCCTGCTTTTACTTTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTATGGCTCTAGGAAGTTCCCGACTCAGGCCTGCTTTTACTTTTT  750

seq1  CC-TCCACTGTGAAAACTGGAGCTGCGGCTA-CCTTTCCAGAGAGCTCCA  796
      || ||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  CCTTCCACTGTG-AAACTGGAGCTGCGGCTACCCTTTCCAGAGAGCTCCA  799

seq1  CTCTCCCTCCATGCCTTCCATTGCAACCCACAAGTGTAAAGGGCAGGATT  846
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  CTCTCCCTCCATGCCTTCCA-TGCAACCCACAAGTGT-AAGGGCAGGATT  847

seq1  CCAGGAAACACATATG-TCCCATAGGGAA  874
      |||| |||| | | || ||||||||||||
seq2  CCAGAAAACTCTTTTGTTCCCATAGGGAA  876

seq1: chr18_75843828_75844367
seq2: B6Ng01-034P16.g_76_613 (reverse)

seq1  AGCCTCC-CCCACCACCCCCAGGCACCTCACAAAAACCAAAGGAGTTGTG  49
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCACCCACAACCCCCAGGCACCTCACAAAAACCAAAGGAGTTGTG  50

seq1  AATCCTGGGAACCCTGATGACTGAAGGGAAGGATAGGGGTTTGCTGTCTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGGAACCCTGATGACTGAAGGGAAGGATAGGGGTTTGCTGTCTC  100

seq1  CACCCCAATGTCCTAATGCCAGAATCAGAGAAGCAATGAGGTCACAGCAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAATGTCCTAATGCCAGAATCAGAGAAGCAATGAGGTCACAGCAG  150

seq1  GCCACCAGGAATTGGGCACTTTGAAAGACACTTTCCTCTTCTCATATCTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGGAATTGGGCACTTTGAAAGACACTTTCCTCTTCTCATATCTA  200

seq1  TTATGGATCCATTAAGCAAGCCTGTCTCCAGTGCGGTGAGCAAAATCAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGATCCATTAAGCAAGCCTGTCTCCAGTGCGGTGAGCAAAATCAGC  250

seq1  CTCCTCCAGGGATAGGCTCCTGCTGGCCTGCCAGAGGTTGACAACCAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCAGGGATAGGCTCCTGCTGGCCTGCCAGAGGTTGACAACCAAGT  300

seq1  TCCCTCCTGCTCTCAACTGTGTCCTTGGAACTCGCAGACAGCGTCTCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTGCTCTCAACTGTGTCCTTGGAACTCGCAGACAGCGTCTCCTT  350

seq1  ACTTGGCCCTCTGCTGCCGCCTGCATGGGCCTACGTGGAGGGAAGCTGAA  399
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTTGGCCCTCTGCTGCCGCATGCATGGGCCTACGTGGAGGGAAGCTGAA  400

seq1  TCGGGTAAGAGCCTGTGACTCAGGCTGCTGCAGCAGCCCCAGATGACCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTAAGAGCCTGTGACTCAGGCTGCTGCAGCAGCCCCAGATGACCAC  450

seq1  GCGCTTTTGTGGATATAACTCAGTCTGGGCCCTGCTCACAGGACCTGGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTTTGTGGATATAACTCAGTCTGGGCCCTGCTCACAGGACCTGGGG  500

seq1  TAGCTTGGCATGGGGTGGGATCAGTTCTGCTCCTGAAAGAA  540
      ||||||||||||||||||||||||||||||||   ||||||
seq2  TAGCTTGGCATGGGGTGGGATCAGTTCTGCTC---AAAGAA  538