BAC Information

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BAC

Clone NameB6Ng01-037E11
Chromosome18 (Build37)
Map Location 86,617,635 - 86,774,749
singlet/doubletdoublet
Overlap geneNeto1
Upstream geneLOC665382, LOC545269, LOC545270, LOC665402
Downstream geneCbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318, Ppia-ps18_1039.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E11.bB6Ng01-037E11.g
ACCDH865205DH865206
length852940
definitionDH865205|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E11, 5' end.DH865206|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,774,221 - 86,774,749)(86,617,635 - 86,618,578)
sequence
gaattcataattgcaaccacagtgtcctcctgtggccataacatatttct
acaaagtaattcattttacttcttctctaataaggtttttatagcgtttt
catatagttttaaacaccgagttacagagtgacaagaagtgacccagagt
ctccctgctttctcagcgtttcttctagtccaaatgttgctttgtggagc
taggtttttaatgagaattcctggaaagaagctgtgtctgcagagacggg
ttgactgattagagcttctgtactgtgcagagataggaatgctatgggtc
cagaggctaattagcttgttctgggcaagctacaatccccaaatagtcaa
cccttgtgcacctctgtgtttgaactaacatcctgtgactaatagataaa
atcttcaactctattaacttaacagacccacttgcttccaacaacttaaa
aatatagcaatttcatcaataacttctgagccacatgggaaagctttatc
tcactgtaaccacctctctgatgacccactaacgtattttaaacttgcct
tcatttatgaatttctttgttaagtaaaactataaagacctcacgaaatt
gaaatcgcttccacagtaacatggaatttgggataagttatatctgtgtt
cctgggccatggtcactcaaaatggccctagaataaactgcctcttattt
cctttttagatgtggttttttagtgacagtgtggtggtacatgcctgtca
cccttgcattcgagagacagaggaggggaatcgtgagttctggaaaagtt
tagactacaaaagaggagccaaaatgaagggggtgttgtgggggatggtt
ta
gaattcacacacttgttcattacctttcttctgggctgtgatgtggttga
ggggaccttgtgatgaagggatgacggccacctcatgcaagacattttgc
agattaaagggatggtggagaaatatacaaacaaacaagcaaaagaagag
agtattgaggggagaacaaaatgaagcaaagctctgggaaaatgataaat
catcaggcagtgcacacaggggcttgtttatttagctgggtctggatttc
caataacccagatcatttattatagtttattaaactactagcacagttcc
cattgttatttgagaactacttctcactagctccatctggtgataacaga
gtttttgactcatgagtctttggtgggaagaagcactttccatggaaatt
ataaattaaatgatgtatatataaatttatatgaagtagatataatttaa
atgtaatatatatattacacacacacacacacacacacacatatatataa
ctaagttagtttagaatcctagaatagccactatgttacaattcatgttt
taaattctttgaagttttttttattctttcctgagatgggctcttactat
gagttcccgaatcccaggctgcttccttgaactcaatccttctgcatcag
ccatatgaatctggcactggggtgatagacatgtgctttcaccattgctt
tcatattaaatgaaatatttgataatgtggatgaactgaatatgaggttg
atgccctttgttggacaccttgataagtggcactgagaacagctgtgcaa
tcaggcaaacaaaggcacagcctgtaataccggctattcttacaggtttg
ctggcttgatacaatgccttcagattttatttacttcttgatttaataag
aaaactgtgtatatcactaatcagtctctacataaagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86774221_86774749
seq2: B6Ng01-037E11.b_369_899 (reverse)

seq1  TAAACCATCCCCCACAACACCCCCTTCATTTTGGCTCCTCTTTTGTAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATCCCCCACAACACCCCCTTCATTTTGGCTCCTCTTTTGTAGTC  50

seq1  TAAACTTTTCCAGAACTCACGATTCCCCTCCTCTGTCTCTCGAATGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTTCCAGAACTCACGATTCCCCTCCTCTGTCTCTCGAATGCAAG  100

seq1  GGTGACAGGCATGTACCACCACACTGTCACT-AAAAACCACATCT-AAAA  148
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  GGTGACAGGCATGTACCACCACACTGTCACTAAAAAACCACATCTAAAAA  150

seq1  GGAAATAAGAGGCAGTTTATTCTAGGGCCATTTTGAGTGACCATGGCCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAAGAGGCAGTTTATTCTAGGGCCATTTTGAGTGACCATGGCCCA  200

seq1  GGAACACAGATATAACTTATCCCAAATTCCATGTTACTGTGGAAGCGATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACAGATATAACTTATCCCAAATTCCATGTTACTGTGGAAGCGATT  250

seq1  TCAATTTCGTGAGGTCTTTATAGTTTTACTTAACAAAGAAATTCATAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCGTGAGGTCTTTATAGTTTTACTTAACAAAGAAATTCATAAAT  300

seq1  GAAGGCAAGTTTAAAATACGTTAGTGGGTCATCAGAGAGGTGGTTACAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAAGTTTAAAATACGTTAGTGGGTCATCAGAGAGGTGGTTACAGT  350

seq1  GAGATAAAGCTTTCCCATGTGGCTCAGAAGTTATTGATGAAATTGCTATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGCTTTCCCATGTGGCTCAGAAGTTATTGATGAAATTGCTATA  400

seq1  TTTTTAAGTTGTTGGAAGCAAGTGGGTCTGTTAAGTTAATAGAGTTGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTTGTTGGAAGCAAGTGGGTCTGTTAAGTTAATAGAGTTGAAG  450

seq1  ATTTTATCTATTAGTCACAGGATGTTAGTTCAAACACAGAGGTGCACAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCTATTAGTCACAGGATGTTAGTTCAAACACAGAGGTGCACAAG  500

seq1  GGTTGACTATTTGGGGATTGTAGCTTGCCCA  529
      |||||||||||||||||||||||||||||||
seq2  GGTTGACTATTTGGGGATTGTAGCTTGCCCA  531

seq1: chr18_86617635_86618578
seq2: B6Ng01-037E11.g_69_1007

seq1  GAATTCACACACTTGTTCATTACCTTTCTTCTGGGCTGTGATGTGGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACTTGTTCATTACCTTTCTTCTGGGCTGTGATGTGGTTGA  50

seq1  GGGGACCTTGTGATGAAGGGATGACGGCCACCTCATGCAAGACATTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCTTGTGATGAAGGGATGACGGCCACCTCATGCAAGACATTTTGC  100

seq1  AGATTAAAGGGATGGTGGAGAAATATACAAACAAACAAGCAAAAGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAGGGATGGTGGAGAAATATACAAACAAACAAGCAAAAGAAGAG  150

seq1  AGTATTGAGGGGAGAACAAAATGAAGCAAAGCTCTGGGAAAATGATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGAGGGGAGAACAAAATGAAGCAAAGCTCTGGGAAAATGATAAAT  200

seq1  CATCAGGCAGTGCACACAGGGGCTTGTTTATTTAGCTGGGTCTGGATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGCAGTGCACACAGGGGCTTGTTTATTTAGCTGGGTCTGGATTTC  250

seq1  CAATAACCCAGATCATTTATTATAGTTTATTAAACTACTAGCACAGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACCCAGATCATTTATTATAGTTTATTAAACTACTAGCACAGTTCC  300

seq1  CATTGTTATTTGAGAACTACTTCTCACTAGCTCCATCTGGTGATAACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTATTTGAGAACTACTTCTCACTAGCTCCATCTGGTGATAACAGA  350

seq1  GTTTTTGACTCATGAGTCTTTGGTGGGAAGAAGCACTTTCCATGGAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACTCATGAGTCTTTGGTGGGAAGAAGCACTTTCCATGGAAATT  400

seq1  ATAAATTAAATGATGTATATATAAATTTATATGAAGTAGATATAATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAAATGATGTATATATAAATTTATATGAAGTAGATATAATTTAA  450

seq1  ATGTAATATATATATTACACACACACACACACACACACACATATATATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATATATATATTACACACACACACACACACACACACATATATATAA  500

seq1  CTAAGTTAGTTTAGAATCCTAGAATAGCCACTATGTTACAATTCATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTAGTTTAGAATCCTAGAATAGCCACTATGTTACAATTCATGTTT  550

seq1  TAAATTCTTTGAAGTTTTTTTTATTCTTTCCTGAGATGGGCTCTTACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTTTGAAGTTTTTTTTATTCTTTCCTGAGATGGGCTCTTACTAT  600

seq1  GAGTTCCCGAATCCCAGGCTGCTTCCTTGAACTCAATCCTTCTGCATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCCGAATCCCAGGCTGCTTCCTTGAACTCAATCCTTCTGCATCAG  650

seq1  CCATATGAATCTGGCACTGGGGTGATAGACATGTGCTTTCACCATTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGAATCTGGCACTGGGGTGATAGACATGTGCTTTCACCATTGCTT  700

seq1  TCATATTAAATGAAATATTTGATAATGTGGATGAACTGAATATGAGGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTAAATGAAATATTTGATAATGTGGATGAACTGAATATGAGGTTG  750

seq1  ATGCCC-TTGTTGGACACCTTGATAAGTGGCACTGAGAACAGCTGTGCAA  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTTGTTGGACACCTTGATAAGTGGCACTGAGAACAGCTGTGCAA  800

seq1  TCAGGCAAACAAAGGCACAGCCTGTAATACCGGCTATTCTTACAGGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAACAAAGGCACAGCCTGTAATACCGGCTATTCTTACAGGTTTG  850

seq1  CTGGCTTGATACAATGCCTTCAGATTTTTATTTACTTTCTTGTATTTAAT  899
      |||||||||||||||||||||||| |||||||||| |||||| |||||||
seq2  CTGGCTTGATACAATGCCTTCAGA-TTTTATTTAC-TTCTTG-ATTTAAT  897

seq1  AAGAAAAACTGTGTATATCACATAATCAGCTCTCTACATAAAGAC  944
      ||| ||||||||||||||||| ||||||| |||||||||||||||
seq2  AAG-AAAACTGTGTATATCAC-TAATCAG-TCTCTACATAAAGAC  939