BAC Information

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BAC

Clone NameB6Ng01-038M19
Chromosome18 (Build37)
Map Location 28,927,816 - 28,929,001
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038M19.bB6Ng01-038M19.g
ACCDH866253DH866254
length1,1761,107
definitionDH866253|Mus musculus domesticus DNA, BAC clone: B6Ng01-038M19, 5' end.DH866254|Mus musculus domesticus DNA, BAC clone: B6Ng01-038M19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgaactctttggggactgtgtaacttctgccccattaggt
gaatcttgaagcagtacaaattttgattattcaatattacagatactaaa
cttgaagcaaagttgtttatctttgaataaaaaaaataatggtcttttat
acaaattactctctttgattgttgctttcttctgtatttctatagcactg
aggatctggggctacaaagtacgtaatagaacactcaaggcaaaagatta
gaaaacacttcaagattgacagataaaggtattccaagtcacagatacag
caaagagcatggagaactaagatggccactctttttagaaaatgtggtgt
tagattggatattcatagaaatgagtgttttagaagggaatctcagattc
ttgtttgtagtcttagaacaagagatgataagacccctaaagcaactaca
tgtagtcatatctttagcaaaaaaaatgtataactggatttgaaatatga
caatggctgtttactcaaaagtataccactccagccaacagctagacaca
aaattaagaaagatgattgtcacatgttggtcaaagcttcagatagcaaa
aggcaacttagaggtgagaagagaagaaaacggaagaccatggctgaaga
gctgagaatttctgagctgtagaagctcacttcaccattggaaaactgac
cagagagtttgcgtcttaccattgtcttttatttttaattttttttatta
cgtattttcctcaattacatttccaatgctagcccaaaagtcccgcatgc
cctcccccccacttccctacccacccattcccactttttggccctggtgt
tcccctgtactggggcatataaagtttgcatgaccaatgggcctctcttt
ccagtgatagccgactaggccatcttttgatacatatgcagctagagtca
agagctccgggtactggttagttcatattgttgttccacctatagggttg
cagatctcctttaactccttgggtgctttcctctagctcctccattgggg
gccctgtgatctatccatagctgactatgagcatccacttatgtggttgc
taggcccagcctagtctcacaagagacagctatatcagttctttcagcag
ctgctagtatgcatgtgttcagcgtt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattggtggattttcgtatattaaacc
atccctgcatccctggaataaaacctgcttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccctttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccactttggttgattttcccctgagtttgattaa
tttcctgccgtctactcctcttgggtgaatttgctccttttttctagggc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccgttcttctt
ggaagcactcagcgcttgagtttccctcttagaaagccttcattgtgtcc
ataggtttgggacagtggtgctcatttccttaaccttaaaagtcttaatt
tcttcttattccttctttgacaaggtatctgagaaaaagtgtattcggtt
cccagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28927816_28929001
seq2: B6Ng01-038M19.b_47_1222 (reverse)

seq1  AACGCTGACACCATTGCATACACTAGCAAGCCTTTGCTGAAAGGACCCTG  50
      |||||||| ||   |||||  |||||| |||   ||||||||| |  |||
seq2  AACGCTGA-ACACATGCAT--ACTAGC-AGC---TGCTGAAAGAA--CTG  41

seq1  ATATAGCTGTCTCTTGTGAGACTAGGCTGGGGCCTAGCAAACACATAAGT  100
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  ATATAGCTGTCTCTTGTGAGACTAGGCT-GGGCCTAGCAACCACATAAGT  90

seq1  GGATGCTCATAGTCAGCTATTGGATAGATCACAGGGCCCCCAATGGAGGA  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGATGCTCATAGTCAGCTA-TGGATAGATCACAGGGCCCCCAATGGAGGA  139

seq1  GCTAGA-GAAAGCACCCAAGGAGTTAAA-GAGATCTGCAACCCTATAGGT  198
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTAGAGGAAAGCACCCAAGGAGTTAAAGGAGATCTGCAACCCTATAGGT  189

seq1  GGAACAACAATATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTG  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAACAACAATATGAACTAACCAGTA-CCCGGAGCTCTTGACTCTAGCTG  238

seq1  CATATGTATCAAAAGATGGCCTAGTCGGCTATCACTGGAAAGAGAGGCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATCAAAAGATGGCCTAGTCGGCTATCACTGGAAAGAGAGGCCC  288

seq1  ATTGGTCATGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCATGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCA  338

seq1  AAAAGTGGGAATGGGTGGGTAGGGAAGTGGGGGGGAGGGCATGCGGGACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGGAATGGGTGGGTAGGGAAGTGGGGGGGAGGGCATGCGGGACT  388

seq1  TTTGGGCTAGCATTGGAAATGTAATTGAGGAAAATACGTAATAAAAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTAGCATTGGAAATGTAATTGAGGAAAATACGTAATAAAAAAAA  438

seq1  TTAAAAATAAAAGACAATGGTAAGACGCAAACTCTCTGGTCAGTTTTCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAAAAGACAATGGTAAGACGCAAACTCTCTGGTCAGTTTTCCA  488

seq1  ATGGTGAAGTGAGCTTCTACAGCTCAGAAATTCTCAGCTCTTCAGCCATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAAGTGAGCTTCTACAGCTCAGAAATTCTCAGCTCTTCAGCCATG  538

seq1  GTCTTCCGTTTTCTTCTCTTCTCACCTCTAAGTTGCCTTTTGCTATCTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCGTTTTCTTCTCTTCTCACCTCTAAGTTGCCTTTTGCTATCTGA  588

seq1  AGCTTTGACCAACATGTGACAATCATCTTTCTTAATTTTGTGTCTAGCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGACCAACATGTGACAATCATCTTTCTTAATTTTGTGTCTAGCTG  638

seq1  TTGGCTGGAGTGGTATACTTTTGAGTAAACAGCCATTGTCATATTTCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGAGTGGTATACTTTTGAGTAAACAGCCATTGTCATATTTCAAA  688

seq1  TCCAGTTATACATTTTTTTTGCTAAAGATATGACTACATGTAGTTGCTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTATACATTTTTTTTGCTAAAGATATGACTACATGTAGTTGCTTT  738

seq1  AGGGGTCTTATCATCTCTTGTTCTAAGACTACAAACAAGAATCTGAGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTTATCATCTCTTGTTCTAAGACTACAAACAAGAATCTGAGATT  788

seq1  CCCTTCTAAAACACTCATTTCTATGAATATCCAATCTAACACCACATTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTAAAACACTCATTTCTATGAATATCCAATCTAACACCACATTTT  838

seq1  CTAAAAAGAGTGGCCATCTTAGTTCTCCATGCTCTTTGCTGTATCTGTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAGAGTGGCCATCTTAGTTCTCCATGCTCTTTGCTGTATCTGTGA  888

seq1  CTTGGAATACCTTTATCTGTCAATCTTGAAGTGTTTTCTAATCTTTTGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATACCTTTATCTGTCAATCTTGAAGTGTTTTCTAATCTTTTGCC  938

seq1  TTGAGTGTTCTATTACGTACTTTGTAGCCCCAGATCCTCAGTGCTATAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTTCTATTACGTACTTTGTAGCCCCAGATCCTCAGTGCTATAGA  988

seq1  AATACAGAAGAAAGCAACAATCAAAGAGAGTAATTTGTATAAAAGACCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAAGAAAGCAACAATCAAAGAGAGTAATTTGTATAAAAGACCAT  1038

seq1  TATTTTTTTTATTCAAAGATAAACAACTTTGCTTCAAGTTTAGTATCTGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTATTCAAAGATAAACAACTTTGCTTCAAGTTTAGTATCTGT  1088

seq1  AATATTGAATAATCAAAATTTGTACTGCTTCAAGATTCACCTAATGGGGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAATAATCAAAATTTGTACTGCTTCAAGATTCACCTAATGGGGC  1138

seq1  AGAAGTTACACAGTCCCCAAAGAGTTCAGAGAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTACACAGTCCCCAAAGAGTTCAGAGAGAATTC  1176