BAC Information

Click to search

BAC

Clone NameB6Ng01-041A10
Chromosome18 (Build37)
Map Location 76,209,931 - 76,210,978
singlet/doubletsinglet
Overlap geneZbtb7c
Upstream geneDym, LOC628356, EG667777, Smad7, Gm672
Downstream gene4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576, EG664805, LOC620139, Ier3ip1, Hdhd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041A10.bB6Ng01-041A10.g
ACCDH867810DH867811
length1,061489
definitionDH867810|Mus musculus domesticus DNA, BAC clone: B6Ng01-041A10, 5' end.DH867811|Mus musculus domesticus DNA, BAC clone: B6Ng01-041A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacaaagatatttcctatctttgaatacttatatgaagtttaa
cttgtcaattaaccatagtgagagattaataataattaataatgaaacaa
taaccataaataaaacctagtaagtgtagtctctcttctcaaagtatcct
attgtattgtaccatgacaatgaaagactatattacaacacctacatgat
gggaccaactgagtgaacaacacaggctgcttgtcgggtgtggctatgtt
tgtctccattgatccccgggctgtctttctggaccgcatgatgacatctg
ccttcccaattgtcatgcctaggatgtgaatcttccctttgtccagtgtg
tgccatatgtgtgctacctacccaccaggtagtaacaatctcatttgtca
aatcagctgctacaggatcacggtgtttgtgctcaaataaccctcagaac
agtatatattttaaaacacaatgaattgtttcttcttggaattctccatt
ttatatttttgatcctagttgactgtcaatagctagctgtatatagtact
aactgtagaaacccatcaacaaaaggagacagatatactttatatctaag
ccagcttgaatacagctgtcttagagggtttgataagttaatttgaccag
ctggcggtaaagggcaccacatatatatgatatgcacacgaatacatgaa
cagatgcagactatcatctgtgcctgacactatagcttcgcttcttaagc
ctgagccataagttgtgcaaacacagcgatgtaaattcctggggtctgta
tactatagctgtcctgggtttgtacactattgctgtcctgggtttgtaca
ctatagctctctatggtttgtacactatagctgtcctgggtttgtaacca
atgctctctggggtttggacactatactgtcctgggttgtcacatagctg
tcctcaccttgtttgctcctttttcacaaattgctttgacaaagggctta
cctaggtataacttacatctataggaaggcagacttgtatcatttttatg
gaggggatttc

cagaggaaaatacttcccagacattgcccagctacacacctaaccgtgat
actctatcttataatcaaaacctgaaaagcttagccctcctgaacaattt
tctgagggatatgattcaccaaaatgagggggtaaacccaggagaggaca
ttgggaaggcaggaacccaaaccacagactgaaacggtgtggagtaagca
gttgacattgaagaaaagcagccaagaataatggtgggcctgtggcagaa
tggagccagttcaacctaggggaggtcagggggtctctggagggccttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttctccttctcc
ttctccttctccttctccttctccttctccctctccctctccctctccct
ctccctctccctctctcactctctctctctctgagtgtgagtgtgaggtt
gtggtatttgaattggtttttttagatatgagctaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_76209931_76210978
seq2: B6Ng01-041A10.b_67_1092

seq1  TTATATGAAGTTTAACTTGTCAATTAACCATAGTGAGAGATTAATAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGAAGTTTAACTTGTCAATTAACCATAGTGAGAGATTAATAATAA  50

seq1  TTAATAATGAAACAATAACCATAAATAAAACCTAGTAAGTGTAGTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGAAACAATAACCATAAATAAAACCTAGTAAGTGTAGTCTCTC  100

seq1  TTCTCAAAGTATCCTATTGTATTGTACCATGACAATGAAAGACTATATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAGTATCCTATTGTATTGTACCATGACAATGAAAGACTATATTA  150

seq1  CAACACCTACATGATGGGACCAACTGAGTGAACAACACAGGCTGCTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCTACATGATGGGACCAACTGAGTGAACAACACAGGCTGCTTGTC  200

seq1  GGGTGTGGCTATGTTTGTCTCCATTGATCCCCGGGCTGTCTTTCTGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGCTATGTTTGTCTCCATTGATCCCCGGGCTGTCTTTCTGGACC  250

seq1  GCATGATGACATCTGCCTTCCCAATTGTCATGCCTAGGATGTGAATCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGACATCTGCCTTCCCAATTGTCATGCCTAGGATGTGAATCTTC  300

seq1  CCTTTGTCCAGTGTGTGCCATATGTGTGCTACCTACCCACCAGGTAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCCAGTGTGTGCCATATGTGTGCTACCTACCCACCAGGTAGTAA  350

seq1  CAATCTCATTTGTCAAATCAGCTGCTACAGGATCACGGTGTTTGTGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCATTTGTCAAATCAGCTGCTACAGGATCACGGTGTTTGTGCTCA  400

seq1  AATAACCCTCAGAACAGTATATATTTTAAAACACAATGAATTGTTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCCTCAGAACAGTATATATTTTAAAACACAATGAATTGTTTCTTC  450

seq1  TTGGAATTCTCCATTTTATATTTTTGATCCTAGTTGACTGTCAATAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCTCCATTTTATATTTTTGATCCTAGTTGACTGTCAATAGCTA  500

seq1  GCTGTATATAGTACTAACTGTAGAAACCCATCAACAAAAGGAGACAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATAGTACTAACTGTAGAAACCCATCAACAAAAGGAGACAGATA  550

seq1  TACTTTATATCTAAGCCAGCTTGAATACAGCTGTCTTAGAGGGTTTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATATCTAAGCCAGCTTGAATACAGCTGTCTTAGAGGGTTTGATA  600

seq1  AGTTAATTTGACCAGCTGGCGGTAAAGGGCACCACATATATATGATATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTGACCAGCTGGCGGTAAAGGGCACCACATATATATGATATGC  650

seq1  ACACGAATACATGAACAGATGCAGACTATCATCTGTGCCTGACACTATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAATACATGAACAGATGCAGACTATCATCTGTGCCTGACACTATAG  700

seq1  CTTCGCTTCTTAAGCCTGAGCCATAAGTTGTGCAAACACAGCGATGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCTTCTTAAGCCTGAGCCATAAGTTGTGCAAACACAGCGATGTAAA  750

seq1  TTCCT-GGGTCTGTATACTATAGCTGTCCTGGGTTTGTACACTATTGCTG  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGGTCTGTATACTATAGCTGTCCTGGGTTTGTACACTATTGCTG  800

seq1  TCCTGGGTTTGTACACTATAGCTCTCTATGGTTTGTACACTATAGCTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGTTTGTACACTATAGCTCTCTATGGTTTGTACACTATAGCTGTC  850

seq1  CTGGGTTTGTACACTATAGCTCTCTGGGGTTTGTACACTATAGCTGTCCT  899
      ||||||||||| || |  ||||||||||||||| |||||||| |||||||
seq2  CTGGGTTTGTA-ACCAATGCTCTCTGGGGTTTGGACACTATA-CTGTCCT  898

seq1  GGGTTTGTACACTATAGCTGTCCTTCAGCTTTGTTATGCTTCTATTTTCA  949
      ||| |||| ||| |||||||||| ||| | ||||| |||| || ||||||
seq2  GGG-TTGT-CAC-ATAGCTGTCC-TCA-CCTTGTT-TGCTCCT-TTTTCA  941

seq1  TCAGAGTTGCTTCTGACAGATGGACTGAGCTAAGGTTATAAGCTTAGCAT  999
       || | |||||| ||||| | || || | |||  | ||||| |||| || 
seq2  -CA-AATTGCTT-TGACA-AAGGGCTTACCTA--GGTATAA-CTTA-CA-  982

seq1  TCAGTAGGAAGGCCAGAGCTTGTTACCAATATTTATGGAGGGGACTTTC  1048
      ||  |||||||| |||| |||||  |  || ||||||||||||| ||||
seq2  TCTATAGGAAGG-CAGA-CTTGTATC--ATTTTTATGGAGGGGA-TTTC  1026


| Home | SequenceCutter | Blast | Download |