BAC Information

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BAC

Clone NameB6Ng01-042I03
Chromosome18 (Build37)
Map Location 22,477,123 - 22,478,225
singlet/doubletsinglet
Overlap geneLOC546708
Upstream geneLOC225264, Klhl14, 4921528I01Rik
Downstream geneLOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042I03.bB6Ng01-042I03.g
ACCDH868866DH868867
length1,1891,100
definitionDH868866|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I03, 5' end.DH868867|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgatccacttaaacttgagctttgtaccagcagattagaatg
gattaatttgcattcttctatatgatagctaccagttaagccaggaccat
ttgttgaaaatgctgtctttttttccactggatggttttagctcctttgt
caaagatcaagtgaccatagtagtgtgggtacatttctgggccatcaatt
ctattccatttgatctatctatctgtcacggtacccctaccatgcagttt
ttatcacagttgctctctaatacagctagaggtcaggaatggttattcca
ccagaagttcttatattgttgagaatagtttttgctatcctaggtttttg
ttttgttttgttttttgtttttgttattccagatgaatttgcaaattgcc
ttttctaacttggtgaagaaatgagttggaattttgatggggattgcatt
gaatctgtagattgcttttggcatcatagccatttttccaatattaatcc
tgagaatccatgagcatgggagatctttccatcttctaagatcttctttg
atatcattcttcagagacttgaagatcttatcatacagatctttcacttc
cttacttagagtcacaccaaggtattttatattatttgtaactattgtga
agggtgttggttccccgatttctctctgagcctgtttatcttttgtgtag
agaaaggtcactgatttgtttgaatacatttttttatccagctattgcac
taaaactgtttatcaggtttaggagttttctagtggaatttttaggggca
cttatatatactatcatatcatctgcaaatagtgatattttgaccttttt
gtttccaatgtttatccccttgatctccttttgatgtctaattgctctag
ctaggacttaaagtactctattgatagtagggagaaagtaggcatcctcg
tctagtccctgaatttactgggattggcttcagtttccctccatttagtt
gaatgctggctactggtttgctgtaattgctttattatgtaagatggacc
tgaattcctgaaattctggactttatctgatgggtcggatttgtcaatgt
tcttgacttaagaagatcatgtgtttggctctgattgtataatgcatacg
tatggatctgtataaacgtctgagtctggatagactact
gaattccttcttggtcacagccttctcagcaacagcctgctcctccttct
caatctcctctgggtctctgtagaagtaaagatcaggcacaacctcccat
gcctgctcacagtctcccgtacttcgcatgcagagtacttccggggccag
catccaccacatcagacccactgagtgagctcccttgtttcataggatgg
caatgtccatatagcgcagaggagaatctgtgttacacagagcaatggtg
ggtaggttgacatgagaggcctctgtgagtggctggtggtcagccctggg
atcagtcaccactagaagccgtggctccctgaaagctgcctggatctggt
tagtgaaggtcccaggtgcgaagcagccagcaattggagtggctcctgtg
gcagcagcaaacttcaactcagctcactgcccagtgttcctggaggtgat
gatgtgtgtcagaagggttctcgatggcaacaatagcttgagctgtgagc
aacagcttcccccaggtcctcttcagatttatgatgtcacttttcctttt
gtactgctccatctgaaagtcagagttggtgccacctaagtgggttcctg
cagcaaggaatttgaggaaaaattcctcctcatcagcaggacatcaagga
ctccacacattgcatacgtttcccttttagatgggacccaagaacaatgc
cctatggacccgcccctgggtagcgctgaaagactaatgccctttctatg
tgaggtaaattatgtctctccaagaaatcatacaacaaactagttttaag
tttgtggaaacaagtcccccccacccccacccccgttttctattcatgtt
gacaaggaatttcagggcatgattagcatcataaaggctttgaccaggtc
aaaggctactgtacatcttatttattaatcccaaagagttaaaatggtgt
gtccaaacacactgcgtgtgctctcttgacaccgcataaagcatccatac
agcggcaagttttcttttagtaaatgtaaacctccacaacttactaatcc
cataaaataattataatcttaagttcttttttattactatggataccaaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22477123_22478225
seq2: B6Ng01-042I03.g_63_1162 (reverse)

seq1  TTTGGTATCATTAGTAAATAAAAAAGAACTAAAGATTAATAATTA-TTTA  49
      |||||||||  |||| |||||||||||||| |||||| ||||||| ||||
seq2  TTTGGTATCCATAGT-AATAAAAAAGAACTTAAGATT-ATAATTATTTTA  48

seq1  TGGGATTAGTAAGTTGTGGAGTTTTACATTTACTAAAAGATAAACTTGCC  99
      ||||||||||||||||||||| |||||||||||||||||| |||||||||
seq2  TGGGATTAGTAAGTTGTGGAGGTTTACATTTACTAAAAGA-AAACTTGCC  97

seq1  GCTGTATGGATGCTTTATGCGGTGTCAAGAGAGCACACGCAGTGTGTTTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGGATGCTTTATGCGGTGTCAAGAGAGCACACGCAGTGTGTTTG  147

seq1  GACACACCATTTTAACTCTTTGGGATTAATAAATAAGATGTACAGTAGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACCATTTTAACTCTTTGGGATTAATAAATAAGATGTACAGTAGCC  197

seq1  TTTGACCCTGGTCAAAGCCTTTATGATGCTAATCATGCCCTGAAATTCCT  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGA-CCTGGTCAAAGCCTTTATGATGCTAATCATGCCCTGAAATTCCT  246

seq1  TGTCAACATGAATAGAAAACGGGGGTGGGGGTGGGGGGGACTTGTTTCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACATGAATAGAAAACGGGGGTGGGGGTGGGGGGGACTTGTTTCCA  296

seq1  CAAACTTAAAACTAGTTTGTTGTATGATTTCTTGGAGAGACATAATTTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAAAACTAGTTTGTTGTATGATTTCTTGGAGAGACATAATTTAC  346

seq1  CTCACATAGAAAGGGCATTAGTCTTTCAGCGCTACCCAGGGGCGGGTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATAGAAAGGGCATTAGTCTTTCAGCGCTACCCAGGGGCGGGTCCA  396

seq1  TAGGGCATTGTTCTTGGGTCCCATCTAAAAGGGAAACGTATGCAATGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCATTGTTCTTGGGTCCCATCTAAAAGGGAAACGTATGCAATGTGT  446

seq1  GGAGTCCTTGATGTCCTGCTGATGAGGAGGAATTTTTCCTCAAATTCCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTTGATGTCCTGCTGATGAGGAGGAATTTTTCCTCAAATTCCTT  496

seq1  GCTGCAGGAACCCACTTAGGTGGCACCAACTCTGACTTTCAGATGGAGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGAACCCACTTAGGTGGCACCAACTCTGACTTTCAGATGGAGCA  546

seq1  GTACAAAAGGAAAAGTGACATCATAAATCTGAAGAGGACCTGGGGGAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAAGGAAAAGTGACATCATAAATCTGAAGAGGACCTGGGGGAAGC  596

seq1  TGTTGCTCACAGCTCAAGCTATTGTTGCCATCGAGAACCCTTCTGACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCACAGCTCAAGCTATTGTTGCCATCGAGAACCCTTCTGACACA  646

seq1  CATCATCACCTCCAGGAACACTGGGCAGTGAGCTGAGTTGAAGTTTGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCACCTCCAGGAACACTGGGCAGTGAGCTGAGTTGAAGTTTGCTG  696

seq1  CTGCCACAGGAGCCACTCCAATTGCTGGCTGCTTCGCACCTGGGACCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACAGGAGCCACTCCAATTGCTGGCTGCTTCGCACCTGGGACCTTC  746

seq1  ACTAACCAGATCCAGGCAGCTTTCAGGGAGCCACGGCTTCTAGTGGTGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCAGATCCAGGCAGCTTTCAGGGAGCCACGGCTTCTAGTGGTGAC  796

seq1  TGATCCCAGGGCTGACCACCAGCCACTCACAGAGGCCTCTCATGTCAACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCAGGGCTGACCACCAGCCACTCACAGAGGCCTCTCATGTCAACC  846

seq1  TACCCACCATTGCTCTGTGTAACACAGATTCTCCTCTGCGCTATATGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCATTGCTCTGTGTAACACAGATTCTCCTCTGCGCTATATGGAC  896

seq1  ATTGCCATCCTATGAAACAAGGGAGCTCACTCAGTGGGTCTGATGTGGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCATCCTATGAAACAAGGGAGCTCACTCAGTGGGTCTGATGTGGTG  946

seq1  GATGCTGGCCCCGGAAGTACTCTGCATGCGAAGTACGGGAGACTGTGAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGCCCCGGAAGTACTCTGCATGCGAAGTACGGGAGACTGTGAGC  996

seq1  AGGCATGGGAGGTTGTGCCTGATCTTTACTTCTACAGAGACCCAGAGGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGGAGGTTGTGCCTGATCTTTACTTCTACAGAGACCCAGAGGAG  1046

seq1  ATTGAGAAGGAGGAGCAGGCTGTTGCTGAGAAGGCTGTGACCAAGAAGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAGGAGGAGCAGGCTGTTGCTGAGAAGGCTGTGACCAAGAAGGA  1096

seq1  ATTC  1103
      ||||
seq2  ATTC  1100