BAC Information

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BAC

Clone NameB6Ng01-048L02
Chromosome18 (Build37)
Map Location 18,109,401 - 18,109,939
singlet/doubletsinglet
Overlap genenone
Upstream gene1700001G01Rik, 4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048L02.bB6Ng01-048L02.g
ACCDH873178DH873179
length7571,124
definitionDH873178|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L02, 5' end.DH873179|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcggcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtgtatatactggattacgttgatggatttccgtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgatagtt
ttgatgtgttcttggattcggttagcaagaactttattgaggatttttgc
atcaatattcataagggatattggtctgaagttctctatctttgtggggt
ctttttgtggtttaggtatccgagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttcgagtttgtggaatagtttgtgaagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
ctcctgggctttttatggttgggagactattaatgactgcttctatttct
ttgggggatatcgggctgtttagatcattaacctgatcttgatttcaact
ttggtacctggtatctgtctagaaacttctcaatttcatccaggttctcc
agtttttgttgagtatagccttttgtagaaaggatctgatggtgttttgg
attcttcgggatctgttgttatgtctcccttttcatttctgatttggtta
attagaatgctttccctgtgccctctagtgagtctggcttatggtttgtc
tatcttg
gaattccaggaaaacacaataaaggaagcaaaggaaatgaacaaaatagt
ccaagatctaaaattggaaataggaacaataaagaaatcacaagaggaga
caatgctggagttagaaaacccaggaatgagatcaggagtcatagatgga
agcatcaccaagagaacacaagagatagaagagagaatttcgggggcaga
agataccatagaaaacattgacacaacagtcaaagaaaacgcaaaaaagc
aaaaagctcataacccaaactatccaggacatctagggcacaatgggagg
acaatacctaaggataataggttttagaagagagctaagattcccaacat
aaagggccagtaaatatcttcaacaaaattataggagagggctggagaaa
tgactcattggttaagagcactgattgctcttccataggtcctgagtgca
attcccagcaaccacatggtggctaacaaccacctataatgggatctgag
gccctcttctggtgtgtctgaagacagctacagtgtactcatatacaaat
aaataaataaataaatcttttaaaaaattatagaagaaaactttcctaac
ctggagaaagaaatgcccataaacatacaagaagcctacagaactccaaa
taggctggaccagaaaagaaatttctcccctcacataataatcaaaatat
caaatgcattaaacaaagaatatttaaagcagtaagggaaaaaggtcaag
tacatataaaagcagacctataaaaattacaccagacttctcacagagga
ttatgaaagccagaaatcttggcagatgtcatacagaccctagagaacac
atattgctagcccaggctactatacccagcaacgctcattaccatagacg
agaatcaaagtattcatgacaacaaatttaccaacatctttagcctagga
agataccgatgaaacatcacctagaagaactaacctaaaaaggcagagga
tcttcactatcgaagagtgcacaactgatcacctaccaatacgagtacat
cgtctcatcctactatgaccatcttagacagactgcactgactacgacga
ttgcgtcccatgaattacttcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18109401_18109939
seq2: B6Ng01-048L02.b_260_800 (reverse)

seq1  CAAGGTAGACAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGAAAGCA  50
      |||| |||||||||| | ||||||||||||||||||||||||||||||||
seq2  CAAGATAGACAAACCATAAGCCAGACTCACTAGAGGGCACAGGGAAAGCA  50

seq1  TTCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TTCTAATTAACCAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCC  100

seq1  GAAGAAATCCAAAACACCATCAGATCC-TTCTACAAAAGGCTATACTCAA  149
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAG-AATCCAAAACACCATCAGATCCTTTCTACAAAAGGCTATACTCAA  149

seq1  C-AAAACTGGAGAACCTGGATGAAATGGAGAAGTTTCTAGACAGATACCA  198
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAAAACTGGAGAACCTGGATGAAATTGAGAAGTTTCTAGACAGATACCA  199

seq1  GGTACCAAAGTTG-AATCAAGATCAGGTTAATGATCTAAACAGCCCGATA  247
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTACCAAAGTTGAAATCAAGATCAGGTTAATGATCTAAACAGCCCGATA  249

seq1  TCCCCCAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAACCAAAAAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCCCCAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAACCATAAAAAG  299

seq1  CCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTCCAAAGAAG  347
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCAGGAGCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAG  349

seq1  ATCTAATCCCAGTTCTTCACAAACTATTCCACAAAATAGAAACAGAAGGT  397
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  ATCTAATCCCAGTTCTTCACAAACTATTCCACAAACTCGAAACAGAAGGT  399

seq1  ACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACC  447
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTCTACCCAACTCATTCTATGAAGCCACAATTACTCGGATACCTAAACC  449

seq1  ACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCCTTCTGA  497
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCCTTATGA  499

seq1  ATATTGGTGCAAAAATCCTCAATAAAGTTCTTGCTAACCGAA  539
      |||||| |||||||||||||||||||||||||||||||||||
seq2  ATATTGATGCAAAAATCCTCAATAAAGTTCTTGCTAACCGAA  541