BAC Information

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BAC

Clone NameB6Ng01-052K03
Chromosome18 (Build37)
Map Location 25,404,648 - 25,405,709
singlet/doubletsinglet
Overlap geneAW554918
Upstream geneGalnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6, Epl2, Mocos, Fhod3, 5730494M16Rik
Downstream geneBrunol4, LOC100041241, LOC665916, LOC100041263, LOC100041274
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052K03.bB6Ng01-052K03.g
ACCDH875926DH875927
length1,0561,232
definitionDH875926|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K03, 5' end.DH875927|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccttcttcattatgcctttgagtgactcttttactagagtag
tgcgtgacttgaatgttttgagaagtatttccccttttttgccctccctg
tgagagtttgtatataattaatctttcagctctaggattattttttaaat
gccgtctatattattaagtctttgcatattccttacaatgcattttggtt
agactcactcctccctcctgaagctccaccccactgtctgactcaccaac
ttcatgttttctttgtttttaatctgtaagtcccaaatattcttaggagt
taaatctgccctggagaacaggagatagccaccaggtgggtctctgtgtt
aattgctatatgctattagaaagtttctcctattaaaggctcattggtgt
aggataaattttagccttttcccttaaatttttgttaaaattctgaactg
ttttttttcttctttcagatggaaacttttttaaccacaaactttgtgtc
agattatctctttattagaaagttttagtagtttgtgtcttctttcaggg
gatttttccattttttccatgttttcaaacttatatgcaaaaagttggag
tcatacaggttttagaggattaaagtgtttattacatgaagtttaactaa
cttgtaataaatccccaagttttcgtttcatattttgacaatctgcttct
gtaaaggaatgtctgaaacatagttgtttcctcctcgtggaggacatact
cagtttacttcttgattgaattaacaacctaatcactcttaagataccga
aatatatttttatttattttggaatttatactttgtctgaaaaccataaa
atagtttttatatttaaattgaccatgtattacaaactaccttaggggag
agtgtgccaggtgtaaatttatttacaagatattgggtagcagaatacag
ctgtataaaatcatgtattaattacatttttaaacagaaacattattatt
tttatttataatacctgtaattgagccattcactattttctttgtctatc
tatatc
gaattcagtaagaacgttacctattcagtaacattcaaatttacctctag
tagagacagtaaaagtaaacaggcattacaatttacttgaatagagctag
aaagctcagggctagtctacatagtaattacttagaacaatagccgagtc
acacccatacataggaatatacaatggcttaggaaaaaggtgggttgtgg
tttgaattcccctggtgcacgttttttcactaggcccagaagaatagcat
aatcaggtatttactaaaggacccctgatggtgggtttaacaatagacta
gcattgcatcagagcattcacctggctcctgtgtttagctgatcttaatt
aagggttgttcctatctcagctgtaaacacttcctggctccccctacctt
tttatgtatgcattttctttgttttgtgtaaagaaccattatgcatcgat
gtaccttggcagatgtatttgcctagctttcttgtttttcttctgtatta
taagactggtattcattttgagaaattgcattcagatacacattctctct
gtgtccctgtctgtttgtcatccccgccgactgcttgctcatctgtaacc
ggaactctgagttttcctacagattggggacctgactgaggtctatctgc
agcaggttccatttcctgttagcagcttttctttccaagaatcccatgtc
tctgacattatcaacattttggggtgtccaaggaaattcatgtttcatcc
cagccacatgctctagcctcagtgacttttcttagtcatggaagaatatt
ttcataacccctttgtttctaggcctccatgcaatgacacctctttccac
atatctggtctcagtgactttctttagtaataaagggaaagcctatattc
ctttcttctattcttgactctaaagccagagccatgttgctgatgctgcc
aagttctgctgctgctgtggctggaacatggccttctctttctattatat
ctttaccagctttctgttcagattattcccttcactgcctaggtttggct
tctcaaacttactcgtagactaacattgaactcagaggctccctgacttg
cttccgaaggcggaattaagggtcttcaactggacaacttttttattctt
aactgataggggaatctactggacaacttttcataatcttaacctgtatt
attgcacgagttggtcgtccttttcctgatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_25404648_25405709
seq2: B6Ng01-052K03.b_44_1099

seq1  GAATTCTTCCTTCTTCATTATGCCTTTGAGTGACTCTTTTACTAGAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTTCTTCATTATGCCTTTGAGTGACTCTTTTACTAGAGTAG  50

seq1  TGCGTGACTTGAATGTTTTGAGAAGTATTTCCCCTTTTTTGCCCTCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGACTTGAATGTTTTGAGAAGTATTTCCCCTTTTTTGCCCTCCCTG  100

seq1  TGAGAGTTTGTATATAATTAATCTTTCAGCTCTAGGATTATTTTTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTTGTATATAATTAATCTTTCAGCTCTAGGATTATTTTTTAAAT  150

seq1  GCCGTCTATATTATTAAGTCTTTGCATATTCCTTACAATGCATTTTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTATATTATTAAGTCTTTGCATATTCCTTACAATGCATTTTGGTT  200

seq1  AGACTCACTCCTCCCTCCTGAAGCTCCACCCCACTGTCTGACTCACCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACTCCTCCCTCCTGAAGCTCCACCCCACTGTCTGACTCACCAAC  250

seq1  TTCATGTTTTCTTTGTTTTTAATCTGTAAGTCCCAAATATTCTTAGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTTCTTTGTTTTTAATCTGTAAGTCCCAAATATTCTTAGGAGT  300

seq1  TAAATCTGCCCTGGAGAACAGGAGATAGCCACCAGGTGGGTCTCTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGCCCTGGAGAACAGGAGATAGCCACCAGGTGGGTCTCTGTGTT  350

seq1  AATTGCTATATGCTATTAGAAAGTTTCTCCTATTAAAGGCTCATTGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTATATGCTATTAGAAAGTTTCTCCTATTAAAGGCTCATTGGTGT  400

seq1  AGGATAAATTTTAGCCTTTTCCCTTAAATTTTTGTTAAAATTCTGAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAATTTTAGCCTTTTCCCTTAAATTTTTGTTAAAATTCTGAACTG  450

seq1  TTTTTTTTCTTCTTTCAGATGGAAACTTTTTTAACCACAAACTTTGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTTCTTTCAGATGGAAACTTTTTTAACCACAAACTTTGTGTC  500

seq1  AGATTATCTCTTTATTAGAAAGTTTTAGTAGTTTGTGTCTTCTTTCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATCTCTTTATTAGAAAGTTTTAGTAGTTTGTGTCTTCTTTCAGGG  550

seq1  GATTTTTCCATTTTTTCCATGTTTTCAAACTTATATGCAAAAAGTTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCCATTTTTTCCATGTTTTCAAACTTATATGCAAAAAGTTGGAG  600

seq1  TCATACAGGTTTTAGAGGATTAAAGTGTTTATTACATGAAGTTTAACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAGGTTTTAGAGGATTAAAGTGTTTATTACATGAAGTTTAACTAA  650

seq1  CTTGTAATAAATCCCCAAGTTTTCGTTTCATATTTTGACAATCTGCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATAAATCCCCAAGTTTTCGTTTCATATTTTGACAATCTGCTTCT  700

seq1  GTAAAGGAATGTCTGAAACATAGTTGTTTCCTCCTCGTGGAGGACATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGAATGTCTGAAACATAGTTGTTTCCTCCTCGTGGAGGACATACT  750

seq1  CAGTTTACTTCTTGATTGAATTAACAACCTAATCACTCTTAAGATACCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACTTCTTGATTGAATTAACAACCTAATCACTCTTAAGATACCGA  800

seq1  AATATATTTTTATTTATTTTTGGAATTTATAC-TTGTCTGAAAACCATAA  849
      |||||||||||||||| ||||||||||||||| |||||||||||||||||
seq2  AATATATTTTTATTTA-TTTTGGAATTTATACTTTGTCTGAAAACCATAA  849

seq1  AATAGTTTTTATATTTAAATTGACCATGTATTACAAACTACCTTAGGGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTTATATTTAAATTGACCATGTATTACAAACTACCTTAGGGGA  899

seq1  GAGTGTGCCAGGTGTAAATTTATTTACAAGATATTGGGTAGCAGAATTAC  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGTGTGCCAGGTGTAAATTTATTTACAAGATATTGGGTAGCAGAA-TAC  948

seq1  AGCTGTATAAAATCATGTATTAATTACATTTTTATAAACAGAAACATTAT  999
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  AGCTGTATAAAATCATGTATTAATTACATTTT--TAAACAGAAACATTAT  996

seq1  TATTTTTATATATAATAACATGTAAATTGAGCCATTCACTATTTTCTTTT  1049
      ||||||||| |||||| || ||| |||||||||||||||||||||| |||
seq2  TATTTTTATTTATAAT-ACCTGT-AATTGAGCCATTCACTATTTTC-TTT  1043

seq1  ATCTATCTATATC  1062
       ||||||||||||
seq2  GTCTATCTATATC  1056