BAC Information

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BAC

Clone NameB6Ng01-053A21
Chromosome18 (Build37)
Map Location 62,935,532 - 63,072,918
singlet/doubletdoublet
Overlap genenone
Upstream geneAfap1l1, LOC100042738, Ablim3, Sh3tc2, Adrb2, Htr4, Fbxo38, Spink10, EG408198, 2700046A07Rik
Downstream geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1, Wdr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053A21.bB6Ng01-053A21.g
ACCDH876217DH876218
length1,032815
definitionDH876217|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A21, 5' end.DH876218|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,935,532 - 62,936,562)(63,072,105 - 63,072,918)
sequence
gaattcattctgccggaagcacaaccacttctgaccctgggcgaaagcca
gccctttctccccgcagactgagtcctcttctggttctcagtatgatacc
agtgagcttcagaagggaactggcagacttggcttgcctctcctggaaag
gaagctgtgtgttcccatgccaaggctgcgggaagcccagccaaggttgc
actgttactccacaggtctcacaggggagagacatgagtcatgtgctttc
agagacaattctgggggagacaggcacctcgggagccctctttgtggata
gggcttgtggtgagaactaacttctcgaatgcagttgtggcacaggttgc
tggtcatttccttgcacttgtcctccctcgtcttcagaagttctggatac
tttaggcagtttagagtcaaggctgtgttttcagcttctttggatggttg
gtgggcatactgggctgagttctacctaacatctttaactacaagagcgc
aagtctactaaaggacaactgattcctaccttggtcactttctcatgtcc
tcctttcttctttacaagctccccaaccttatctcccaggaatggtgcag
agagcctgtgtcttcaagactcatagttatgctggcctttgtaggtgttc
aagacagacattcctgttttttctgtacaccacgttatttgagagttttc
tgttgcttctcttcagatctattttgaaatgtatttgttgcatacttata
aaaatactgaatataattgtgttataaaccaattacccttattccagctc
acagtttttgagggtccttcatgccagggcaggagtctgtgccagagaaa
accagagagaaaacctaaagaccgaagcttggtgtagttccaatgactgc
cttccacggcatgcctccaatgacttaaggatatctcatggggtcgcacc
ttcgccaatagccactacctcccaggaagtcaaccctggcgacaaagctt
ttaactgatatgtgttaaggtgggggaggggg
gaattctccctaaaggcaacgagcatgaacaataaataataaaaaataat
atataaaaaaaacacggggggaagttgtgttggttagttttatgtcaact
tgacagataagctagcatcactggagaagagggaacctcaattgagaaaa
tgcctccataagatcaggctgtaggcaagcctgtaggttattttcttaat
caatgattgatggaggaaggtccagaccattgggggtggggccatccctg
ggctggtggtcctgggttctataaaaaagcatactgattaagccatagga
gcaaggcatcaactcctgcctccaggttccagccctgtttgagttcctgc
cctgactcccttcaatgatggattacaaagtggaagtgtaagccaaatga
accctttcctctcctacttgcttttggtcatggtgtttcatggcatcaat
ggaaaccctaagacttagaataaagctcttgtctaaggaagttgtcttct
tgatctgacaaatatttactgaaaataatctcatttccccctcttataca
tgtggttttgaaatatggactttctgctggggcaagtcttctcacgtgtg
cacgggggactctgctggcatacacaatgcttattcagaagccaccggtt
ttcttgagttttccatgagcatcttttgcattcttcctggatcctatctg
aaacatgtggggagagaaagaatcatgacgcacctgatagtgaactttta
tgtttcaacagaaaagacactagcacctgtgctcaccatgtagcctggac
ttccctccctcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_62935532_62936562
seq2: B6Ng01-053A21.b_41_1072

seq1  GAATTCATTCTGCCGTAAGCACAACCACTTCTGACCCTGGGCGAAAGCCA  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGCCGGAAGCACAACCACTTCTGACCCTGGGCGAAAGCCA  50

seq1  GCCCTTTCTCCCCGCAGACTGAGTCCTCTTCTGGTTCTCAGTATGATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTCTCCCCGCAGACTGAGTCCTCTTCTGGTTCTCAGTATGATACC  100

seq1  AGTGAGCTTCAGAAGGGAACTGGCAGACTTGGCTTGCCTCTCCTGGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTTCAGAAGGGAACTGGCAGACTTGGCTTGCCTCTCCTGGAAAG  150

seq1  GAAGCTGTGTGTTCCCATGCCAAGGCTGCGGGAAGCCCAGCCAAGGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTGTGTTCCCATGCCAAGGCTGCGGGAAGCCCAGCCAAGGTTGC  200

seq1  ACTGTTACTCCACAGGTCTCACAGGGGAGAGACATGAGTCATGTGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACTCCACAGGTCTCACAGGGGAGAGACATGAGTCATGTGCTTTC  250

seq1  AGAAGACAATTCTGGGGGAGACAGGCACCTCGGGAGCCCTCTTTGTGGAT  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-AGACAATTCTGGGGGAGACAGGCACCTCGGGAGCCCTCTTTGTGGAT  299

seq1  AGGGCTTGTGGTGAGAACTAACTTCTCGAATGCAGTTGTGGCACAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGTGGTGAGAACTAACTTCTCGAATGCAGTTGTGGCACAGGTTG  349

seq1  CTGGTCATTTCCTTGCACTTGTCCTCCCTCGTCTTCAGAAGTTCTGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCATTTCCTTGCACTTGTCCTCCCTCGTCTTCAGAAGTTCTGGATA  399

seq1  CTTTAGGCAGTTTAGAGTCAAGGCTGTGTTTTCAGCTTCTTTGGATGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCAGTTTAGAGTCAAGGCTGTGTTTTCAGCTTCTTTGGATGGTT  449

seq1  GGTGGGCATACTGGGCTGAGTTCTACCTAACATCTTTCAGTAGAAGAGCG  500
      ||||||||||||||||||||||||||||||||||||| | || |||||||
seq2  GGTGGGCATACTGGGCTGAGTTCTACCTAACATCTTTAACTACAAGAGCG  499

seq1  CAAGTCTACTAAGGGACAACTGATTCCTACCTTGGTCACTTTCTCATGTC  550
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTACTAAAGGACAACTGATTCCTACCTTGGTCACTTTCTCATGTC  549

seq1  CTCCTTTCTTCTTTACAAGCTCCCCAACCTTATCTCCCAGGAATGGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTTCTTTACAAGCTCCCCAACCTTATCTCCCAGGAATGGTGCA  599

seq1  GAGAGCCTGTGTCTTCAAGACTCAGAGTTATGCTGGCCTTTGTAGGTGTT  650
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGAGCCTGTGTCTTCAAGACTCATAGTTATGCTGGCCTTTGTAGGTGTT  649

seq1  CAAGACAGACATTCCTGTTTTTTCTGTACACCACGTTATTTGAGAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGACATTCCTGTTTTTTCTGTACACCACGTTATTTGAGAGTTTT  699

seq1  CTGTTGCTTCTCTTCAGATCTATTTTGAAATGTATTTGTTGCATACTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTTCTCTTCAGATCTATTTTGAAATGTATTTGTTGCATACTTAT  749

seq1  AAAAATACTGAATATAATTGTGTTATAAACCAATTACCCTTATTCCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACTGAATATAATTGTGTTATAAACCAATTACCCTTATTCCAGCT  799

seq1  CACAGTTTTTGAGGTTCCTTCAGGCCAGGGCAGGAGTCTGTGCCAGAGAA  850
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  CACAGTTTTTGAGGGTCCTTCATGCCAGGGCAGGAGTCTGTGCCAGAGAA  849

seq1  AACCAGAGAGAAAACCTAAAGACCGAAGCTTGGTGTAGTTCCCATGACTG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACCAGAGAGAAAACCTAAAGACCGAAGCTTGGTGTAGTTCCAATGACTG  899

seq1  CCTTCCACGGCATGCCTCCAATGACTTAAGGATATCTCATGGGGTCGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACGGCATGCCTCCAATGACTTAAGGATATCTCATGGGGTCGCAC  949

seq1  CTCCCCAAATAGCCACTACCTCCCAGGAAGTCCACCCTGGCAACCAAGCT  1000
      || | | ||||||||||||||||||||||||| |||||||| || |||||
seq2  CTTCGCCAATAGCCACTACCTCCCAGGAAGTCAACCCTGGCGACAAAGCT  999

seq1  TTTAACGTATA-GTGTTGAGGT-GGGGAGGGGG  1031
      ||||||  ||| ||||| |||| ||||||||||
seq2  TTTAACTGATATGTGTTAAGGTGGGGGAGGGGG  1032

seq1: chr18_63072105_63072918
seq2: B6Ng01-053A21.g_68_882 (reverse)

seq1  AGAGGAGGGAAGGAAAACCAACCTACATGGTGAGCAAAGGTGCTAGTGCC  50
      |||||||||| ||||  |||  |||||||||||||| ||||||||||| |
seq2  AGAGGAGGGAGGGAAGTCCAGGCTACATGGTGAGCACAGGTGCTAGTGTC  50

seq1  TTTCCTGTTGAAACATAAAAGTACATTGCCAGGTGTGTCATGATTCTTTC  100
      ||| |||||||||||||||||| || |  |||||| ||||||||||||||
seq2  TTTTCTGTTGAAACATAAAAGTTCACTATCAGGTGCGTCATGATTCTTTC  100

seq1  TCTCCCCACATGTTTCAGA-AGGAGCCAGGAAGAATGCAAAAGATGCTCA  149
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  TCTCCCCACATGTTTCAGATAGGATCCAGGAAGAATGCAAAAGATGCTCA  150

seq1  TGGAAAACTCAAGAAAACCGGTGGCTTCCGAATAAGCATTGTGTCTGCCA  199
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  TGGAAAACTCAAGAAAACCGGTGGCTTCTGAATAAGCATTGTGTATGCCA  200

seq1  GCAGAGTCCCCCGTGCACACGTGATTAGACTTGCCCCAGCAGAAAGTCCA  249
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  GCAGAGTCCCCCGTGCACACGTGAGAAGACTTGCCCCAGCAGAAAGTCCA  250

seq1  TATTTCAAAACCACATGTATAAGAGGGGGAAATGAGATTATTTTCAGTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAAACCACATGTATAAGAGGGGGAAATGAGATTATTTTCAGTAA  300

seq1  ATATTTGTCAGATCAAGAAGACAACTTCCTTAGACAAGAGCTTTATTCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTCAGATCAAGAAGACAACTTCCTTAGACAAGAGCTTTATTCTA  350

seq1  AGTCTTAGGGTTTCCATTGCTGCCATGAAACACCATGACCAAAAGCAAGT  399
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTCTTAGGGTTTCCATTGATGCCATGAAACACCATGACCAAAAGCAAGT  400

seq1  AGGAGAGGAAAGGGTTCATTTGGCTTACACTTCCACTTTGTAATCCATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGAAAGGGTTCATTTGGCTTACACTTCCACTTTGTAATCCATCA  450

seq1  CTGAAGGGAGTCAGGGCAGGAACTCAAACAGGGCTGGAACCTGGAGGCAG  499
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGGAGTCAGGGCAGGAACTCAAACAGGGCTGGAACCTGGAGGCAG  500

seq1  GAGCTGATGCCTTGCTCCTATGGCTTACTCAGTCTGCTTTCTTATAGAAC  549
      ||| ||||||||||||||||||||||| ||||| |||||| |||||||||
seq2  GAGTTGATGCCTTGCTCCTATGGCTTAATCAGTATGCTTTTTTATAGAAC  550

seq1  CCAGGACCACCAGCCCAGGGATGGCCCCACCCACAATGGTCTGGACCTTC  599
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCAGGACCACCAGCCCAGGGATGGCCCCACCCCCAATGGTCTGGACCTTC  600

seq1  CTCCATCAATCATTGATTAAGAAAATAACCTACAGGCTTGCCTACAGCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCAATCATTGATTAAGAAAATAACCTACAGGCTTGCCTACAGCCT  650

seq1  GATCTTATGGAGGCATTTTCTCAATTGAGGTTCCCTCTTCTCCAGTGATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTATGGAGGCATTTTCTCAATTGAGGTTCCCTCTTCTCCAGTGATG  700

seq1  CTAGCTTATCTGTCAAGTTGACATAAAACTAACCAACACAACTTCCCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTAGCTTATCTGTCAAGTTGACATAAAACTAACCAACACAACTTCCCCCC  750

seq1  GTGTTTCTTTTCTATATTATTTTTTATTATTTATTGTTCATGCTCGTTGG  799
      |||||| |||| ||||||||||||||||||||||||||||||||||||| 
seq2  GTGTTTTTTTTATATATTATTTTTTATTATTTATTGTTCATGCTCGTTGC  800

seq1  CTTTAGGGAGAATTC  814
      |||||||||||||||
seq2  CTTTAGGGAGAATTC  815