BAC Information

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BAC

Clone NameB6Ng01-059E13
Chromosome18 (Build37)
Map Location 84,955,278 - 85,088,170
singlet/doubletdoublet
Overlap geneCyb5
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik
Downstream geneFbxo15, 1700034H14Rik, LOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059E13.bB6Ng01-059E13.g
ACCDH880611DH880612
length8841,102
definitionDH880611|Mus musculus domesticus DNA, BAC clone: B6Ng01-059E13, 5' end.DH880612|Mus musculus domesticus DNA, BAC clone: B6Ng01-059E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,087,284 - 85,088,170)(84,955,278 - 84,956,392)
sequence
gaattcctgcactgaaaaagaaggagatagtgagcatgcatgtattcatt
actgcctcctgactgtggatatgacatcacagagctcctgcccccttgat
tttctcactgcagtgaatggcacccatgagctgcaagccagatgaaactc
ttttcctccaaggattttatcagataaccagtcaaagaaaagtaaagaca
aaaactacaaaagaaaaaaaaaaaaaaaacaactaagattgttaatctgg
ggccaatcccaacacttagggtacagaacagctgtagttgttccaaactg
agtccatgtaaacttttctgtgttctaattagaataggcaaatctgaaaa
gacaatggcagaagttacataccattaaaaggagtttctgtatcttggta
atatttctacatcagcctcgtaaaagagatgagcctgtttccttaggtgc
tctcagaaagcgattagctttaatgacaagcagttgacaggtataaaaag
tccatgtatttacaggttttgtgtgtcccaatgaggaaagatgctacctc
acacaggggtatttaggtaaggtggtgcaagaagcgtcacagcctctgaa
gatgagactggacagctcagaatgtgtatctgcccaaagagaggttcgtg
tgactcagggatgacagtcaagggatgctgtggccacagggagtgagcac
agcagtctcctctgggagcacgaagatccagtctcatcgtgtgagcacta
cctctttatttcaggctcaacagtagattggtgtgtggttataattcagt
acccagctgttacacaatgcctagaaaataatcttatatctacttagatt
tttttttttttgattttcgagaatagtgttctct
gaattccacacctcggttccttccttgtacattatgggggctgggtttct
gcggggggaaggccactttctgctctaacattctgctacacggtacacag
cagcttggagagatgctgagaagtcatctggcatatctataggcttccag
ggaaattacggcttaatcaaaaccagcaaaagagtttaatttagaaatcc
tcatttcttatcccctgattcccatcactttccctgaagaaattacacag
ccttgttagagaaccaactcggcatgtctcagactttcccctctggactc
aagcagcttacctccactctgaggcctctttttgagcaatgcaacataag
aatgaggcaacatgttgaggactttcgggttcccagcataggtggccatt
gtgccttgcttcccaggcaggacaggtaggggtggtaagcatgcatgtgt
gcctgtgtagagcaaagtgcaggaaggaatggcggttaatgttttcctta
gccacccaaattcattgagctgttacaacagatgggctatccagtgatct
ctgaaaggagaccgtgcctgtgttatgttgaaggtcctgtcatgcaggga
aagtaaaagccatatgtttctgatgaaaatattttctgataatgtggaac
aaacattctgtttctcatcaccatctctcagcacagagtgcacttgaaat
caggttaacgagagctaaatttaatcattgtgtgacctgattgggtatcc
acagcctgggttatcaaatatcccactttctgttgctctcagtccatctc
gctgtttccttagggaatgcaaacaatggcggcagaaaataatgaatgtg
gtaaatctggtcagagagaagtatgactaaaattctttctttgtttcatt
ccttcagccccatgtgtagtgtggggtaacttgggtttacaaagtactga
agcagttcttaaaaggaaagacacagaattatggctctacttatcacata
ttctttgctttattagatgcttaaaaacaggtcaataacattatggccat
ttgacaggttttctgggctttcttgaaatgcatgagacagcatgtcatgg
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85087284_85088170
seq2: B6Ng01-059E13.b_47_930 (reverse)

seq1  AGAGAAACACT-GTCTCGAAAAATCAAAAAAAAAAAAATCTAAGTAGATA  49
      |||| ||||||  ||||| |||||||||||||||||||||||||||||||
seq2  AGAG-AACACTATTCTCG-AAAATCAAAAAAAAAAAAATCTAAGTAGATA  48

seq1  TAAGATTAATTTTCTAGGCATTGTGTTAACAGCTGGGTACTGAATTATAA  99
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAGATT-ATTTTCTAGGCATTGTG-TAACAGCTGGGTACTGAATTATAA  96

seq1  CCACACACCAATCTACTGTTGGGCCTGAAATAAAGAGGTAGTGCTCACAC  149
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCACACACCAATCTACTGTTGAGCCTGAAATAAAGAGGTAGTGCTCACAC  146

seq1  GATGAGACTGGATCTTCGTGCTCCCAGAGGAGACTGCTGTGCTCACTCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACTGGATCTTCGTGCTCCCAGAGGAGACTGCTGTGCTCACTCCC  196

seq1  TGTGGCCACAGCATCCCTTGACTGTCATCCCTGAGTCACACGAACCTCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCACAGCATCCCTTGACTGTCATCCCTGAGTCACACGAACCTCTC  246

seq1  TTTGGGCAGATACACATTCTGAGCTGTCCAGTCTCATCTTCAGAGGCTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCAGATACACATTCTGAGCTGTCCAGTCTCATCTTCAGAGGCTGT  296

seq1  GACGCTTCTTGCACCACCTTACCTAAATACCCCTGTGTGAGGTAGCATCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTTCTTGCACCACCTTACCTAAATACCCCTGTGTGAGGTAGCATCT  346

seq1  TTCCTCATTGGGACACACAAAACCTGTAAATACATGGACTTTTTATACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTGGGACACACAAAACCTGTAAATACATGGACTTTTTATACCT  396

seq1  GTCAACTGCTTGTCATTAAAGCTAATCGCTTTCTGAGAGCACCTAAGGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTGCTTGTCATTAAAGCTAATCGCTTTCTGAGAGCACCTAAGGAA  446

seq1  ACAGGCTCATCTCTTTTACGAGGCTGATGTAGAAATATTACCAAGATACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCATCTCTTTTACGAGGCTGATGTAGAAATATTACCAAGATACA  496

seq1  GAAACTCCTTTTAATGGTATGTAACTTCTGCCATTGTCTTTTCAGATTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCTTTTAATGGTATGTAACTTCTGCCATTGTCTTTTCAGATTTG  546

seq1  CCTATTCTAATTAGAACACAGAAAAGTTTACATGGACTCAGTTTGGAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTAATTAGAACACAGAAAAGTTTACATGGACTCAGTTTGGAACA  596

seq1  ACTACAGCTGTTCTGTACCCTAAGTGTTGGGATTGGCCCCAGATTAACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTGTTCTGTACCCTAAGTGTTGGGATTGGCCCCAGATTAACAA  646

seq1  TCTTAGTTGTTTTTTTTTTTTTTTTCTTTTGTAGTTTTTGTCTTTACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTGTTTTTTTTTTTTTTTTCTTTTGTAGTTTTTGTCTTTACTTT  696

seq1  TCTTTGACTGGTTATCTGATAAAATCCTTGGAGGAAAAGAGTTTCATCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACTGGTTATCTGATAAAATCCTTGGAGGAAAAGAGTTTCATCTG  746

seq1  GCTTGCAGCTCATGGGTGCCATTCACTGCAGTGAGAAAATCAAGGGGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGCTCATGGGTGCCATTCACTGCAGTGAGAAAATCAAGGGGGCA  796

seq1  GGAGCTCTGTGATGTCATATCCACAGTCAGGAGGCAGTAATGAATACATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGTGATGTCATATCCACAGTCAGGAGGCAGTAATGAATACATG  846

seq1  CATGCTCACTATCTCCTTCTTTTTCAGTGCAGGAATTC  887
      ||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCACTATCTCCTTCTTTTTCAGTGCAGGAATTC  884

seq1: chr18_84955278_84956392
seq2: B6Ng01-059E13.g_68_1169

seq1  GAATTCCACACCTCGGTTCCTTCCTTGTACATTATGGGGGCTGGGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCTCGGTTCCTTCCTTGTACATTATGGGGGCTGGGTTTCT  50

seq1  GCGGGGGGAAGGCCACTTTCTGCTCTAACATTCTGCTACACGGTACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGGAAGGCCACTTTCTGCTCTAACATTCTGCTACACGGTACACAG  100

seq1  CAGCTTGGAGAGATGCTGAGAAGTCATCTGGCATATCTATAGGCTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGAGAGATGCTGAGAAGTCATCTGGCATATCTATAGGCTTCCAG  150

seq1  GGAAATTACGGCTTAATCAAAACCAGCAAAAGAGTTTAATTTAGAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTACGGCTTAATCAAAACCAGCAAAAGAGTTTAATTTAGAAATCC  200

seq1  TCATTTCTTATCCCCTGATTCCCATCACTTTCCCTGAAGAAATTACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTATCCCCTGATTCCCATCACTTTCCCTGAAGAAATTACACAG  250

seq1  CCTTGTTAGAGAACCAACTCGGCATGTCTCAGACTTTCCCCTCTGGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTAGAGAACCAACTCGGCATGTCTCAGACTTTCCCCTCTGGACTC  300

seq1  AAGCAGCTTACCTCCACTCTGAGGCCTCTTTTTGAGCAATGCAACATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTTACCTCCACTCTGAGGCCTCTTTTTGAGCAATGCAACATAAG  350

seq1  AATGAGGCAACATGTTGAGGACTTTCGGGTTCCCAGCATAGGTGGCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCAACATGTTGAGGACTTTCGGGTTCCCAGCATAGGTGGCCATT  400

seq1  GTGCCTTGCTTCCCAGGCAGGACAGGTAGGGGTGGTAAGCATGCATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGCTTCCCAGGCAGGACAGGTAGGGGTGGTAAGCATGCATGTGT  450

seq1  GCCTGTGTAGAGCAAAGTGCAGGAAGGAATGGCGGTTAATGTTTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTAGAGCAAAGTGCAGGAAGGAATGGCGGTTAATGTTTTCCTTA  500

seq1  GCCACCCAAATTCATTGAGCTGTTACAACAGATGGGCTATCCAGTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCAAATTCATTGAGCTGTTACAACAGATGGGCTATCCAGTGATCT  550

seq1  CTGAAAGGAGACCGTGCCTGTGTTATGTTGAAGGTCCTGTCATGCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGAGACCGTGCCTGTGTTATGTTGAAGGTCCTGTCATGCAGGGA  600

seq1  AAGTAAAAGCCATATG-TTCTGATGAAAATATTTTCTGATAATGTGGAAC  649
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGCCATATGTTTCTGATGAAAATATTTTCTGATAATGTGGAAC  650

seq1  AAACATTCTGTTTCTCATCACCATCTCTCAGCACAGAGTGCACTTGAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTGTTTCTCATCACCATCTCTCAGCACAGAGTGCACTTGAAAT  700

seq1  CAGGTTAACGAGAGCTAAATTTAATCATTGTGTGACCTGATTGGGTATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAACGAGAGCTAAATTTAATCATTGTGTGACCTGATTGGGTATCC  750

seq1  ACAGCCTGGGTTATCAAATATCCCACTTTCTGTTGCTCTCAGTTCCATCT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACAGCCTGGGTTATCAAATATCCCACTTTCTGTTGCTCTCAG-TCCATCT  799

seq1  CGCTGTTTCCTTAGGGAATGCAAAACAATGGCGGCAGAAAAATAATGAAA  849
      ||||||||||||||||||||| ||||||||||||||| ||||||||| ||
seq2  CGCTGTTTCCTTAGGGAATGC-AAACAATGGCGGCAG-AAAATAATG-AA  846

seq1  TGTGGTAAATCTGGTCAGAGAGAAGTATGACTAAAATTCCTTCCTTTGTT  899
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  TGTGGTAAATCTGGTCAGAGAGAAGTATGACTAAAATT-CTTTCTTTGTT  895

seq1  TCATCCCTTCAGCCCCATGTGTAGTGT-GGGTTACTTTGGTTTACAAAGT  948
      |||| |||||||||||||||||||||| |||| |||| ||||||||||||
seq2  TCATTCCTTCAGCCCCATGTGTAGTGTGGGGTAACTTGGGTTTACAAAGT  945

seq1  ACTGAAGCCAGTTCTTAGAAGGAAAGACACAGATTATTGGCTCTACTTTA  998
      ||||||| ||||||||| ||||||||||||||| |  ||||||||| |||
seq2  ACTGAAG-CAGTTCTTAAAAGGAAAGACACAGAATTATGGCTCTAC-TTA  993

seq1  TCACATATTCCTTTGTTTTTATAGATGCCTTATAAAAACAGGTC-ATAAC  1047
      ||||||||| ||||| |||  |||||||    |||||||||||| |||||
seq2  TCACATATT-CTTTGCTTTATTAGATGC---TTAAAAACAGGTCAATAAC  1039

seq1  AATTAATGGCCATTTGTACAGGTTTTCTGGGCTTTCCTGGAATTGCATGA  1097
      |  | ||||||||||| |||||||||||||||||| || ||| |||||||
seq2  A--TTATGGCCATTTG-ACAGGTTTTCTGGGCTTT-CTTGAAATGCATGA  1085

seq1  GCAAGCATGTCATTGGTT  1115
      |  ||||||||| |||||
seq2  GACAGCATGTCA-TGGTT  1102