BAC Information

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BAC

Clone NameB6Ng01-060A13
Chromosome18 (Build37)
Map Location 56,492,924 - 56,494,097
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
Downstream geneLOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060A13.bB6Ng01-060A13.g
ACCDH881133DH881134
length1,0201,153
definitionDH881133|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A13, 5' end.DH881134|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatgggtttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtctc
ctatccgatttggggtaggtaaagatcctttcccaatctgttggtggctt
ttttgtcttattgatggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccatttgatgg
aattgtttgggaaggatgggaaggtatgtccttcttagaggaggtatgtc
actaggggcaaaggatgcctacagttcccattgtgctacctgcctcctgc
tggaggattctatatgagttctcagatgatgttctagctatagttgccat
gcctacactctcccatcataaatttcatgctcctagcgacataaatccaa
ttaagctctttttgtatattttgccttggtcatggtaccttattacagca
ttaagaagaagtcaaaacagaagttagtgccaggaagtgggctacagcca
taacagacctgaccatgttgtattttggaggaatgtggaaaacgttggga
ctctggattagcaaaatggttgaatactataagcagaacttaatggccca
tcctcataggggctcaataggcaatagtgctgatagaaatatggactatg
gaagcccagctcaagagacaaccaaagggaactatcagtaactgggctag
agaccattcttgtaacattgtggcaagaggtgttgctgccttctgccctt
gtcctaagaatttgcttgtggctaaattgaaaacaatggactagattctc
tggtggaggagatttcaaacagccctaatattgactctgtcacttcatta
ttagcaatcactcttctacaggtctacaatgaaaagaccaagtgggggca
aaataaatacatctatacagttgaggataaaagaaccctcaaaacttaat
gttaaaacaggctatggtaa

gaattcctcatggcagagggcacgtgtggattgtactaatacaatctaag
ttctaaacttgctgcagcatatttgagatccagatagacactgagagctt
tgggaactaaaagagggctagggtgcaaagacagcgtgaaggctgagaaa
acaagagaggttttaaattggacgttgtagaatttatgcttgtgatagaa
acttgatacattatttcacgccttcctttttcctttccgtcttccttaac
cacaccccccctctggtcttccttttaaccacgccccctctctccgtcct
tctttgtctcacttaccccaggctgttctcaaattcacttcagagtcaag
gatgaccgggaacttctggtccttctcttcctgagtccaggcacgctcca
taccttgttttacatagtgtggggatcgaacccaaggcttggtgcacgct
aggcaagcacgtcaaccgagctgcatccttagccctacaacttggcttct
tatgaggaacctttgggctttcccagccagatttttctgtatgcaaccta
acttgcaggtgagttacacatccttttcaaaaggaggcttaaaaaaaaat
ccactctgcattcatgatattagacaggaaaggaggttgggactgggtct
gtagatccactattgagaacttgcccgactcccactgggccctggtttcc
attgataggtgaagtgaacggctcttcaagtagcttagaaggggtattta
aaggcttgtgagcaagcaggagaaacagagcatactgttcacaggaacgt
agctagaagagtctcgtgcgctttactgtgaatatcaacaaattatgttc
cattgaaagttcaataaactttcccatatactcaaaataaaagacttgat
atagggactaaatatagcattctaatttatctggaaccgcttttgatcac
aactgtgaaattacacgtagccagatggcatctgataatatgcagaagac
acccacatgcactgtcagtggttttttttatttttctcttactttctgaa
tttcatgtcagttatttatcagcgatggttttcttctccactcttcataa
tttttacatataattcatagtgcaatacacagcttcctgtatctctgaaa
tta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56492924_56494097
seq2: B6Ng01-060A13.g_68_1220 (reverse)

seq1  TAATTCCAGAGTTTACAGGAGAGCATGCTTGTATTGCACTAATTAGAATT  50
      ||||| |||||  ||||||| ||| ||  ||||||||||||    |||||
seq2  TAATTTCAGAG-ATACAGGA-AGC-TG--TGTATTGCACTA---TGAATT  42

seq1  TAATGTAAAAATAATGAAAGAGATGTGAAGAAGGAAAACCATCGCTGTAA  100
        |||||||||| ||||   ||| ||| |||| |||||||||||||| | 
seq2  ATATGTAAAAATTATGA---AGA-GTGGAGAA-GAAAACCATCGCTG-AT  86

seq1  AAATAAACTGACATGAAATTCAGAAAGTAAGAAGAAAAAAAAAAAAAAAC  150
      |||| |||||||||||||||||||||||||||   ||||| |||||||||
seq2  AAAT-AACTGACATGAAATTCAGAAAGTAAGA--GAAAAATAAAAAAAAC  133

seq1  CACTTGGACAGTGCATGTGGGTGTCTTCTGCATATAATCAGGATGCCATC  200
      ||||  ||||||||||||||||||||||||||||| |||| |||||||||
seq2  CACT--GACAGTGCATGTGGGTGTCTTCTGCATATTATCA-GATGCCATC  180

seq1  TGGCTACGTGTAATTTCACAGTTGTGATCAAAAGGCGGTTCCAGATAAAT  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGCTACGTGTAATTTCACAGTTGTGATCAAAA-GCGGTTCCAGATAAAT  229

seq1  TAGAATGCTATATTTAGTCCCTATATCAAGTCTTTTATTTTGAGTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGCTATATTTAGTCCCTATATCAAGTCTTTTATTTTGAGTATATG  279

seq1  GGAAAGTTTATTGAACTTTCAATGGAACATAATTTGTTGATATTCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTTATTGAACTTTCAATGGAACATAATTTGTTGATATTCACAGT  329

seq1  AAAGCGCACGAGACTCTTCTAGCTACGTTCCTGTGAACAGTATGCTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGCACGAGACTCTTCTAGCTACGTTCCTGTGAACAGTATGCTCTGT  379

seq1  TTCTCCTGCTTGCTCACAAGCCTTTAAATACCCCTTCTAAGCTACTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGCTTGCTCACAAGCCTTTAAATACCCCTTCTAAGCTACTTGAA  429

seq1  GAGCCGTTCACTTCACCTATCAATGGAAACCAGGGCCCAGTGGGAGTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGTTCACTTCACCTATCAATGGAAACCAGGGCCCAGTGGGAGTCGG  479

seq1  GCAAGTTCTCAATAGTGGATCTACAGACCCAGTCCCAACCTCCTTTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCTCAATAGTGGATCTACAGACCCAGTCCCAACCTCCTTTCCTG  529

seq1  TCTAATATCATGAATGCAGAGTGGATTTTTTTTTAAGCCTCCTTTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATCATGAATGCAGAGTGGATTTTTTTTTAAGCCTCCTTTTGAAA  579

seq1  AGGATGTGTAACTCACCTGCAAGTTAGGTTGCATACAGAAAAATCTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGTAACTCACCTGCAAGTTAGGTTGCATACAGAAAAATCTGGCT  629

seq1  GGGAAAGCCCAAAGGTTCCTCATAAGAAGCCAAGTTGTAGGGCTAAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCCCAAAGGTTCCTCATAAGAAGCCAAGTTGTAGGGCTAAGGAT  679

seq1  GCAGCTCGGTTGACGTGCTTGCCTAGCGTGCACCAAGCCTTGGGTTCGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCGGTTGACGTGCTTGCCTAGCGTGCACCAAGCCTTGGGTTCGAT  729

seq1  CCCCACACTATGTAAAACAAGGTATGGAGCGTGCCTGGACTCAGGAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACTATGTAAAACAAGGTATGGAGCGTGCCTGGACTCAGGAAGAG  779

seq1  AAGGACCAGAAGTTCCCGGTCATCCTTGACTCTGAAGTGAATTTGAGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCAGAAGTTCCCGGTCATCCTTGACTCTGAAGTGAATTTGAGAAC  829

seq1  AGCCTGGGGTAAGTGAGACAAAGAAGGACGGAGAGAGGGGGCGTGGTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGGTAAGTGAGACAAAGAAGGACGGAGAGAGGGGGCGTGGTTAA  879

seq1  AAGGAAGACCAGAGGGGGGGTGTGGTTAAGGAAGACGGAAAGGAAAAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGACCAGAGGGGGGGTGTGGTTAAGGAAGACGGAAAGGAAAAAGG  929

seq1  AAGGCGTGAAATAATGTATCAAGTTTCTATCACAAGCATAAATTCTACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTGAAATAATGTATCAAGTTTCTATCACAAGCATAAATTCTACAA  979

seq1  CGTCCAATTTAAAACCTCTCTTGTTTTCTCAGCCTTCACGCTGTCTTTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCAATTTAAAACCTCTCTTGTTTTCTCAGCCTTCACGCTGTCTTTGC  1029

seq1  ACCCTAGCCCTCTTTTAGTTCCCAAAGCTCTCAGTGTCTATCTGGATCTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGCCCTCTTTTAGTTCCCAAAGCTCTCAGTGTCTATCTGGATCTC  1079

seq1  AAATATGCTGCAGCAAGTTTAGAACTTAGATTGTATTAGTACAATCCACA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTGCAGCAAGTTTAGAACTTAGATTGTATTAGTACAATCCACA  1129

seq1  CGTGCCCTCTGCCATGAGGAATTC  1174
      ||||||||||||||||||||||||
seq2  CGTGCCCTCTGCCATGAGGAATTC  1153


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