BAC Information

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BAC

Clone NameB6Ng01-061I07
Chromosome18 (Build37)
Map Location 85,498,082 - 85,498,721
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765
Downstream geneLOC665382, LOC545269, LOC545270, LOC665402
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061I07.bB6Ng01-061I07.g
ACCDH882174DH882175
length1,0611,002
definitionDH882174|Mus musculus domesticus DNA, BAC clone: B6Ng01-061I07, 5' end.DH882175|Mus musculus domesticus DNA, BAC clone: B6Ng01-061I07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccacactccgaggaatcaaaactcttaactcttctcaaacct
cattctactaaacaaaaagtgaggtggtgatacaaaactcattctataaa
gccagaactacactgatcccaatgctgcatgaggacacaatgtaaagaca
accttattgaccaagttttctgatgcaaaatgcataaacattcttaacca
agttccacataaatagacagattgacaaaaatcatttgaacatttggaaa
agcatttggaaaagttcagcataccttcatggtaaaagcctgaagaaatt
taggaataaaagcactataattaagcataataaaggccatgttttacaaa
cagaatcaaggttacactcaatggtaaaaatcagaattttttcctctaaa
atcctgagacaagggcacctggcctctcctgtttactctatgtattgctc
aaattcttatctaaagcaacaaggagagagaaggaaataaagggatctga
cttggaaaggaaaaaatgaaatcattcccatttccagatgacatgatgac
atatttaaaatacactatatatggtaccagaacacatttagaactgaagg
atattgcagaaattttggaggacacaaatccaacagcttttctgtatatc
aatcattaacttgtcaagaaagaaactgaaaaaagtcctatcaaattagt
tttaaaaccaatgaataaactgaactgaaattgtgaattgcttctacaat
taaattttaagatactaaaatgaaattaattaagataaatgaccttgaat
gctgcatgctcctttattgcagattaattttgtgatatattacttagcta
attaatccacatataaatgtatttcttgaacgcttcatactttgtttgaa
atagaaagtcctagttctataagccgaaaattacctctgaagagacaaag
aatttctatgatcaatctcatattaagacataagcagcttcaggtgctgt
tcaacgtgtaatcgaggaacaaagtatgccgctccccggtccccatttga
atcaataagga
gaattccttatatgagcattgcttatatggactttatagataaaagttga
ggatgatgttaaaaaacaataaaatgagataaacagtatgaaattttttg
tattaaataccatacctattatagtataactattttataactttattatt
attgttgttattgttattattaataattccatttgtttaaatctcaaatg
atattccacttcctggttacacctccacccccatccatcccacatctgcc
ctcctcttgccttttgcctgtatgagagtgctctcccactcacccacact
ctccagccccactgctccaccatcctcctactctggggcaccatatctcc
cctggaccaagggcctcccctcactttactattgagcaggagagagtttt
aaggccagagatcattcaccttgcctttgtcctttgtcagatgctgtgtc
caacttcagtatgtgaatgctggggctggcctatggcaaaggtccacaat
ttcttttgactcaacataaactcttaactataagaccgtataaaataaaa
taaaaaaaaaacattacaaatctccacagtaagagggcacagcaaattct
ttccccttataaaagaagaaagagaggatgccagaaaagaaagaatggac
taaagcaagaccaaaaaccagtagggcaaatattaaagactatggctcca
cacccaacatctaagcctcatgatgtggcatggtgtggactccagtgggc
tcagacagctgtccctctgtggccctctcagctatggcacacatcatcat
tccattagtctgtttttaattgatgcttatattttccttaatagatgaat
ctgacatctctaaaattcccaaatccctgtagtctttcccttgacagctt
cacaaattggcatcttaggtcctcataggctattttgtgttgctttaatc
ttgccacaagtttgtatgaggtctgtcactatttcattctgcatgtttag
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85498082_85498721
seq2: B6Ng01-061I07.g_70_709

seq1  GAATTCCTTATATGAGCATTGCTTATATGGACTTTATAGATAAAAGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATATGAGCATTGCTTATATGGACTTTATAGATAAAAGTTGA  50

seq1  GGATGATGTTAAAAAACAATAAAATGAGATAAACAGTATGAAATTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATGTTAAAAAACAATAAAATGAGATAAACAGTATGAAATTTTTTG  100

seq1  TATTAAATACCATACCTATTATAGTATAACTATTTTATAACTTTATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATACCATACCTATTATAGTATAACTATTTTATAACTTTATTATT  150

seq1  ATTGTTGTTATTGTTATTATTAATAATTCCATTTGTTTAAATCTCAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTTATTGTTATTATTAATAATTCCATTTGTTTAAATCTCAAATG  200

seq1  ATATTCCACTTCCTGGTTACACCTCCACCCCCATCCATCCCACATCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCACTTCCTGGTTACACCTCCACCCCCATCCATCCCACATCTGCC  250

seq1  CTCCTCTTGCCTTTTGCCTGTATGAGAGTGCTCTCCCACTCACCCACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTGCCTTTTGCCTGTATGAGAGTGCTCTCCCACTCACCCACACT  300

seq1  CTCCAGCCCCACTGCTCCACCATCCTCCTACTCTGGGGCACCATATCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCCCACTGCTCCACCATCCTCCTACTCTGGGGCACCATATCTCC  350

seq1  CCTGGACCAAGGGCCTCCCCTCACTTTACTATTGAGCAGGAGAGAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCAAGGGCCTCCCCTCACTTTACTATTGAGCAGGAGAGAGTTTT  400

seq1  AAGGCCAGAGATCATTCACCTTGCCTTTGTCCTTTGTCAGATGCTGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGAGATCATTCACCTTGCCTTTGTCCTTTGTCAGATGCTGTGTC  450

seq1  CAACTTCAGTATGTGAATGCTGGGGCTGGCCTATGGCAAAGGTCCACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAGTATGTGAATGCTGGGGCTGGCCTATGGCAAAGGTCCACAAT  500

seq1  TTCTTTTGACTCAACATAAACTCTTAACTATAAGACCGTATAAAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGACTCAACATAAACTCTTAACTATAAGACCGTATAAAATAAAA  550

seq1  TAAAAAAAAAACATTACAAATCTCCACAGTAAGAGGGCACAGCAAATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAACATTACAAATCTCCACAGTAAGAGGGCACAGCAAATTCT  600

seq1  TTCCCCTTATAAAAGAAGAAAGAGAGGATGCCAGAAAAGA  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTATAAAAGAAGAAAGAGAGGATGCCAGAAAAGA  640