BAC Information

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BAC

Clone NameB6Ng01-062D03
Chromosome18 (Build37)
Map Location 49,236,158 - 49,237,244
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383326, LOC100042323, LOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062D03.bB6Ng01-062D03.g
ACCDH882666DH882667
length1,079775
definitionDH882666|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D03, 5' end.DH882667|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatgtgtgtcggtcttgccatatctagcagaccttgtttcctt
ggcgacttccccctccactggtccttacaatgtttctgactcctcttcca
caaaggtccctgatcactgagggtaaaagaggtttttcttaaagtgtcag
tcacttgagttcaattctcaagcacaggttttttgcaaagtcaactacac
aataacattggtttgtattcccagttctggggagggacagaattcagcct
agtttaattggtaaacttcaagcctatgacagacgctgtttaaaaaaaaa
aaaaaggaaaaagaaaaagaaaagtggaagactgctaaggagtcctaaga
ttgacctttaaactctatgaatgtgtctgtgtatgtgtgtgttcatgtgc
attcatgtatacacacacactatacacacatatacatacacacacacact
aaagggtgacttgtctttttatatttttttctggagaaaatagaaatcaa
ggcatacttctcaacacttgagttttgcccctcatctttgagatgggaag
tatgataaatctctcctttaaacaccaagtctttccaatttaaaaccccg
aactctgggtgtcagcgggcatgctgttctttatggtctttacagtgtag
tttttcttcctgctgtgtattttgattaattgtccagctggcaactaacc
agttcctgctctagtttgctgtgttgaaatctatttgtctctttgacact
taggtttttctatctttctagtgtcatttttccatctatcattttctctt
tcattttccccaagaaatgagtcactcacagagatcctttgccctcatct
tccagcagatctggagggaaatgtgcaatatctcaacctgtttatagaat
ccatttttttttccattccaactttgtgctcttgattacagctgtgcatt
taaacacaaaacactttatttctttgtaaagctgaattgcatcaattgtt
tcaatttataaatcatgttatcatttcaataaagtcatattcacatctgt
attgtaactgctgttgtctaggatcatgg

gaattcagtgggtcttctgcatatctatatagatctatatctatatctat
atctatatctatatctatatctatatctatatctatatctatatctatat
ctatatctatatctatatctatctttctgtctatctatctatctatctat
ctatctatctatctatctatctatctatctaatcttgtgtttcttttctc
ttgcagctttcagtacactttctttgttctgtatgcttcctgtttaacca
tgatatgtcatggtggttttctttctttgtattgtatatttggtgttgtg
tgtgatttgtttataggtatgggtgtgcctttctttagtttcgagttttc
ctttgtgatattattgaagttctcatctatgtcattgattacttcgatct
gtataatttgcagccccttccctccctatggtatatacatttctttgctc
ctttcctgtttttttttttcttcacattcttcatttatttcatctatatc
ctctaatttatctttgagtcctcttttggactctcctacttgcaaggtag
gagagttgagttattaggcttttcaattccacctttatttcaggttgaat
ccttttcaatgtttctattgctttattgaattctattttaaaatgctgag
ttgtcttctctacattttttgtgtatggtctggttcaagaattgattttc
attttttctatttttgttagatattttcttttatatatatttcaaatgtt
accccaaaatttccctatacccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49236158_49237244
seq2: B6Ng01-062D03.b_40_1118

seq1  GAATTCATATGTGTGTCGGTCTTGCCATATCTAGCAGACCTTGTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGTGTGTCGGTCTTGCCATATCTAGCAGACCTTGTTTCCTT  50

seq1  GGCGACTTCCCCCTCCACTGGTCCTTACAATGTTTCTGACTCCTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACTTCCCCCTCCACTGGTCCTTACAATGTTTCTGACTCCTCTTCCA  100

seq1  CAAAGGTCCCTGATCACTGAGGGTAAAAGAGGTTTTTCTTAAAGTGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCCCTGATCACTGAGGGTAAAAGAGGTTTTTCTTAAAGTGTCAG  150

seq1  TCACTTGAGTTCAATTCTCAAGCACAGGTTTTTTGCAAAGTCAACTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGAGTTCAATTCTCAAGCACAGGTTTTTTGCAAAGTCAACTACAC  200

seq1  AATAACATTGGTTTGTATTCCCAGTTCTGGGGAGGGACAGAATTCAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTGGTTTGTATTCCCAGTTCTGGGGAGGGACAGAATTCAGCCT  250

seq1  AGTTTAATTGGTAAACTTCAAGCCTATGACAGACGCTGTTTAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTGGTAAACTTCAAGCCTATGACAGACGCTGTTTAAAAAAAAA  300

seq1  AAAAAGGAAAAAGAAAAAGAAAAGTGGAAGACTGCTAAGGAGTCCTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAAAAGAAAAAGAAAAGTGGAAGACTGCTAAGGAGTCCTAAGA  350

seq1  TTGACCTTTAAACTCTATGAATGTGTCTGTGTATGTGTGTGTTCATGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTTAAACTCTATGAATGTGTCTGTGTATGTGTGTGTTCATGTGC  400

seq1  ATTCATGTATACACACACACTATACACACATATACATACACACACACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTATACACACACACTATACACACATATACATACACACACACACT  450

seq1  AAAGGGTGACTTGTCTTTTTATATTTTTTTCTGGAGAAAATAGAAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGACTTGTCTTTTTATATTTTTTTCTGGAGAAAATAGAAATCAA  500

seq1  GGCATACTTCTCAACACTTGAGTTTTGCCCCTCATCTTTGAGATGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTTCTCAACACTTGAGTTTTGCCCCTCATCTTTGAGATGGGAAG  550

seq1  TATGATAAATCTCTCCTTTAAACACCAAGTCTTTCCAATTTAAAACCCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATCTCTCCTTTAAACACCAAGTCTTTCCAATTTAAAACCCCG  600

seq1  AACTCTGGGTGTCAGCGGGCATGCTGTTCTTTATGGTCTTTACAGTGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGTGTCAGCGGGCATGCTGTTCTTTATGGTCTTTACAGTGTAG  650

seq1  TTTTTCTTCCTGCTGTGTATTTTGATTAATTGTCCAGCTGGCAACTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCCTGCTGTGTATTTTGATTAATTGTCCAGCTGGCAACTAACC  700

seq1  AGTTCCTGCTCTAGTTTGCTGTGTTGAAATCTATTTGTCTCTTTGACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGCTCTAGTTTGCTGTGTTGAAATCTATTTGTCTCTTTGACACT  750

seq1  TAGGTTTTTCTATCTTTCTAGTGTCATTTTTCCATCTATCATTTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTTCTATCTTTCTAGTGTCATTTTTCCATCTATCATTTTCTCTT  800

seq1  TCATTTTCCCCAAGAAATGAGTCACTCACAGAGATCCTTTGCCCTCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCCCAAGAAATGAGTCACTCACAGAGATCCTTTGCCCTCATCT  850

seq1  TCCAGCAGATCTGGAGGGAAATGTGCAATATCTCAACCTGTTTATAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGATCTGGAGGGAAATGTGCAATATCTCAACCTGTTTATAGAAT  900

seq1  CCATTTTTTTTTCCATTCCAACTTTGTGCTCTTGATTACAAGCTGTGCAT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCATTTTTTTTTCCATTCCAACTTTGTGCTCTTGATTAC-AGCTGTGCAT  949

seq1  TTAAACACAAAAACACTTTATTTCTTTGTAAAGCTGAATTGCATCAATTG  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAC-AAAACACTTTATTTCTTTGTAAAGCTGAATTGCATCAATTG  998

seq1  TTTCAATTTTATAAATTAATTGTTTAATCATTTCAATAAAGTCATATTCA  1050
      |||||| ||||||||| |  ||||  ||||||||||||||||||||||||
seq2  TTTCAA-TTTATAAATCA--TGTT--ATCATTTCAATAAAGTCATATTCA  1043

seq1  CATCTGTATTGTAACTGCTGTTGTCCTAGGATCATGG  1087
      |||||||||||||||||||||||| ||||||||||||
seq2  CATCTGTATTGTAACTGCTGTTGT-CTAGGATCATGG  1079


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